StringDistances.jl/src/compare.jl

267 lines
9.4 KiB
Julia
Executable File

##############################################################################
##
## compare
## compare always return a value between 0 and 1.
##
##############################################################################
"""
compare(s1::AbstractString, s2::AbstractString, dist::PreMetric)
compare returns a similarity score between the strings `s1` and `s2` based on the distance `dist`
"""
function compare(s1::AbstractString, s2::AbstractString,
dist::Union{Hamming, Levenshtein, DamerauLevenshtein}; min_dist = nothing)
s1, s2 = reorder(s1, s2)
len1, len2 = length(s1), length(s2)
len2 == 0 && return 1.0
if min_dist === nothing
1.0 - evaluate(dist, s1, s2) / len2
else
max_dist = ceil(Int, len2 * (1 - min_dist))
# need to add max in case of integer stuff
max(1.0 - evaluate(dist, s1, s2; max_dist = max_dist) / len2, min_dist)
end
end
function compare(s1::AbstractString, s2::AbstractString, dist::Union{Jaro, RatcliffObershelp}; min_dist::Nothing = nothing)
1.0 - evaluate(dist, s1, s2)
end
function compare(s1::AbstractString, s2::AbstractString, dist::AbstractQGramDistance;
min_dist::Nothing = nothing)
# When string length < q for qgram distance, returns s1 == s2
s1, s2 = reorder(s1, s2)
len1, len2 = length(s1), length(s2)
len1 <= dist.q - 1 && return convert(Float64, s1 == s2)
if typeof(dist) <: QGram
1 - evaluate(dist, s1, s2) / (len1 + len2 - 2 * dist.q + 2)
else
1 - evaluate(dist, s1, s2)
end
end
@deprecate compare(dist::PreMetric, s1::AbstractString, s2::AbstractString) compare(s1, s2, dist)
# Handle missing values
function compare(s1::AbstractString, ::Missing, dist::PreMetric; min_dist = nothing)
missing
end
function compare(::Missing, s2::AbstractString, dist::PreMetric; min_dist = nothing)
missing
end
function compare(::Missing, ::Missing, dist::PreMetric; min_dist = nothing)
missing
end
##############################################################################
##
## Winkler
##
##############################################################################
"""
Winkler(dist::Premetric, p::Real = 0.1, boosting_threshold::Real = 0.7, l::Integer = 4)
Winkler is a `PreMetric` modifier that boosts the similarity score between two strings by a scale `p` when the strings share a common prefix with lenth lower than `l` (the boost is only applied the similarity score above `boosting_threshold`)
"""
struct Winkler{T1 <: PreMetric, T2 <: Real, T3 <: Real, T4 <: Integer} <: PreMetric
dist::T1
p::T2 # scaling factor. Default to 0.1
boosting_threshold::T3 # boost threshold. Default to 0.7
l::Integer # length of common prefix. Default to 4
function Winkler(dist::T1, p::T2, boosting_threshold::T3, l::T4) where {T1, T2, T3, T4}
p * l >= 1 && throw("scaling factor times length of common prefix must be lower than one")
new{T1, T2, T3, T4}(dist, p, boosting_threshold, l)
end
end
Winkler(x) = Winkler(x, 0.1, 0.7, 4)
# hard to use min_dist because of whether there is boost or not in the end
function compare(s1::AbstractString, s2::AbstractString, dist::Winkler; min_dist::Nothing = nothing)
l = remove_prefix(s1, s2, dist.l)[1]
# cannot do min_dist because of boosting threshold
score = compare(s1, s2, dist.dist)
if score >= dist.boosting_threshold
score += l * dist.p * (1 - score)
end
return score
end
JaroWinkler() = Winkler(Jaro(), 0.1, 0.7)
##############################################################################
##
## Partial
## http://chairnerd.seatgeek.com/fuzzywuzzy-fuzzy-string-matching-in-python/
##
##############################################################################
"""
Partial(dist::Premetric)
Partial is a `PreMetric` modifier that returns the maximal similarity score between the shorter string and substrings of the longer string
"""
struct Partial{T <: PreMetric} <: PreMetric
dist::T
end
function compare(s1::AbstractString, s2::AbstractString, dist::Partial; min_dist = nothing)
s1, s2 = reorder(s1, s2)
len1, len2 = length(s1), length(s2)
len1 == len2 && return compare(s1, s2, dist.dist; min_dist = min_dist)
len1 == 0 && return 1.0
out = 0.0
for x in qgram(s2, len1)
curr = compare(s1, x, dist.dist; min_dist = min_dist)
out = max(out, curr)
end
return out
end
function compare(s1::AbstractString, s2::AbstractString, dist::Partial{RatcliffObershelp};
min_dist = nothing)
s1, s2 = reorder(s1, s2)
len1, len2 = length(s1), length(s2)
len1 == len2 && return compare(s1, s2, dist.dist)
out = 0.0
for r in matching_blocks(s1, s2)
# Make sure the substring of s2 has length len1
s2_start = r[2] - r[1] + 1
s2_end = s2_start + len1 - 1
if s2_start <= 0
s2_end += 1 - s2_start
s2_start += 1 - s2_start
elseif s2_end > len2
s2_start += len2 - s2_end
s2_end += len2 - s2_end
end
i2_start = nextind(s2, 0, s2_start)
i2_end = nextind(s2, 0, s2_end)
curr = compare(s1, SubString(s2, i2_start, i2_end), RatcliffObershelp())
out = max(out, curr)
end
return out
end
##############################################################################
##
## TokenSort
## http://chairnerd.seatgeek.com/fuzzywuzzy-fuzzy-string-matching-in-python/
##
##############################################################################
"""
TokenSort(dist::Premetric)
TokenSort is a `PreMetric` modifier that adjusts for differences in word orders by reording words alphabetically.
"""
struct TokenSort{T <: PreMetric} <: PreMetric
dist::T
end
function compare(s1::AbstractString, s2::AbstractString, dist::TokenSort; min_dist = nothing)
s1 = join(sort!(split(s1)), " ")
s2 = join(sort!(split(s2)), " ")
compare(s1, s2, dist.dist; min_dist = min_dist)
end
##############################################################################
##
## TokenSet
## http://chairnerd.seatgeek.com/fuzzywuzzy-fuzzy-string-matching-in-python/
##
##############################################################################
"""
TokenSet(dist::Premetric)
TokenSort is a `PreMetric` modifier that adjusts for differences in word orders and word numbers by comparing the intersection of two strings with each string.
"""
struct TokenSet{T <: PreMetric} <: PreMetric
dist::T
end
function compare(s1::AbstractString, s2::AbstractString, dist::TokenSet; min_dist = nothing)
v1 = SortedSet(split(s1))
v2 = SortedSet(split(s2))
v0 = intersect(v1, v2)
s0 = join(v0, " ")
s1 = join(v1, " ")
s2 = join(v2, " ")
isempty(s0) && return compare(s1, s2, dist.dist; min_dist = min_dist)
max(compare(s0, s1, dist.dist; min_dist = min_dist),
compare(s0, s2, dist.dist; min_dist = min_dist),
compare(s1, s2, dist.dist; min_dist = min_dist))
end
##############################################################################
##
## TokenMax
##
##############################################################################
"""
TokenMax(dist::Premetric)
TokenSort is a `PreMetric` modifier that combines similarlity scores using the base distance, its Partial, TokenSort and TokenSet modifiers, with penalty terms depending on string lengths.
"""
struct TokenMax{T <: PreMetric} <: PreMetric
dist::T
end
function compare(s1::AbstractString, s2::AbstractString, dist::TokenMax; min_dist = nothing)
s1, s2 = reorder(s1, s2)
len1, len2 = length(s1), length(s2)
dist0 = compare(s1, s2, dist.dist)
unbase_scale = 0.95
# if one string is much shorter than the other, use partial
if length(s2) >= 1.5 * length(s1)
partial = compare(s1, s2, Partial(dist.dist); min_dist = min_dist)
ptsor = compare(s1, s2, TokenSort(Partial(dist.dist)); min_dist = min_dist)
ptser = compare(s1, s2, TokenSet(Partial(dist.dist)); min_dist = min_dist)
partial_scale = length(s2) > (8 * length(s1)) ? 0.6 : 0.9
return max(dist0,
partial * partial_scale,
ptsor * unbase_scale * partial_scale,
ptser * unbase_scale * partial_scale)
else
ptsor = compare(s1, s2, TokenSort(dist.dist); min_dist = min_dist)
ptser = compare(s1, s2, TokenSet(dist.dist); min_dist = min_dist)
return max(dist0,
ptsor * unbase_scale,
ptser * unbase_scale)
end
end
##############################################################################
##
## Extract
##
##############################################################################
function extract(s1::AbstractString, iter_s2, dist::Union{T, Partial{T}, TokenSort{T}, TokenSet{T}, TokenMax{T}}) where T <: Union{Levenshtein, DamerauLevenshtein}
best_score = 0.0
best_s2 = nothing
for s2 in iter_s2
score = compare(s1, s2, dist; min_dist = best_score)
if (score !== missing) && (score > best_score)
best_s2 = s2
best_score = score
end
end
return best_s2
end
function extract(s1::AbstractString, iter_s2, dist::PreMetric)
best_score = 0.0
best_s2 = nothing
for s2 in iter_s2
score = compare(s1, s2, dist)
if (score !== missing) && (score > best_score)
best_s2 = s2
best_score = score
end
end
return best_s2
end
function extract(::Missing, iter_s2, dist::PreMetric)
return missing
end