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@ -10,4 +10,4 @@ weave_options:
out_width : 50%
---</code></pre><p>You can also set or change the default chunk options for a document either before weave using the <code>set_chunk_defaults</code> function.</p><article class="docstring"><header><a class="docstring-binding" id="Weave.set_chunk_defaults!" href="#Weave.set_chunk_defaults!"><code>Weave.set_chunk_defaults!</code></a><span class="docstring-category">Function</span></header><section><div><pre><code class="language-julia">set_chunk_defaults!(k, v)
set_chunk_defaults!(kv::Pair...)
set_chunk_defaults!(opts::AbstractDict)</code></pre><p>Set default options for code chunks, use <a href="#Weave.get_chunk_defaults"><code>get_chunk_defaults</code></a> to see the current values.</p><p>E.g.: all the three examples below will set default <code>dpi</code> to <code>200</code> and <code>fig_width</code> to <code>8</code>:</p><ul><li><code>set_chunk_defaults!(:dpi, 200); set_chunk_defaults!(:fig_width, 8)</code></li><li><code>set_chunk_defaults!(:dpi =&gt; 200, :fig_width =&gt; 8)</code></li><li><code>set_chunk_defaults!(Dict(:dpi =&gt; 200, :fig_width =&gt; 8))</code></li></ul></div><a class="docs-sourcelink" target="_blank" href="https://github.com/JunoLab/Weave.jl/blob/b1de7efedeca3f6c9ee1e72e3d340dc41bd4c752/src/config.jl#L30-L41">source</a></section></article><article class="docstring"><header><a class="docstring-binding" id="Weave.get_chunk_defaults" href="#Weave.get_chunk_defaults"><code>Weave.get_chunk_defaults</code></a><span class="docstring-category">Function</span></header><section><div><pre><code class="language-julia">get_chunk_defaults()</code></pre><p>Get default options used for code chunks.</p></div><a class="docs-sourcelink" target="_blank" href="https://github.com/JunoLab/Weave.jl/blob/b1de7efedeca3f6c9ee1e72e3d340dc41bd4c752/src/config.jl#L46-L50">source</a></section></article><article class="docstring"><header><a class="docstring-binding" id="Weave.restore_chunk_defaults!" href="#Weave.restore_chunk_defaults!"><code>Weave.restore_chunk_defaults!</code></a><span class="docstring-category">Function</span></header><section><div><pre><code class="language-julia">restore_chunk_defaults!()</code></pre><p>Restore Weave.jl default chunk options.</p></div><a class="docs-sourcelink" target="_blank" href="https://github.com/JunoLab/Weave.jl/blob/b1de7efedeca3f6c9ee1e72e3d340dc41bd4c752/src/config.jl#L53-L57">source</a></section></article></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../publish/">« Publishing to HTML and PDF</a><a class="docs-footer-nextpage" href="../header/">Header Configuration »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <span class="colophon-date" title="Saturday 13 March 2021 18:55">Saturday 13 March 2021</span>. Using Julia version 1.5.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
set_chunk_defaults!(opts::AbstractDict)</code></pre><p>Set default options for code chunks, use <a href="#Weave.get_chunk_defaults"><code>get_chunk_defaults</code></a> to see the current values.</p><p>E.g.: all the three examples below will set default <code>dpi</code> to <code>200</code> and <code>fig_width</code> to <code>8</code>:</p><ul><li><code>set_chunk_defaults!(:dpi, 200); set_chunk_defaults!(:fig_width, 8)</code></li><li><code>set_chunk_defaults!(:dpi =&gt; 200, :fig_width =&gt; 8)</code></li><li><code>set_chunk_defaults!(Dict(:dpi =&gt; 200, :fig_width =&gt; 8))</code></li></ul></div><a class="docs-sourcelink" target="_blank" href="https://github.com/JunoLab/Weave.jl/blob/99916dd70ca2d1d69bc6163cc17f6bc480b91a8a/src/config.jl#L30-L41">source</a></section></article><article class="docstring"><header><a class="docstring-binding" id="Weave.get_chunk_defaults" href="#Weave.get_chunk_defaults"><code>Weave.get_chunk_defaults</code></a><span class="docstring-category">Function</span></header><section><div><pre><code class="language-julia">get_chunk_defaults()</code></pre><p>Get default options used for code chunks.</p></div><a class="docs-sourcelink" target="_blank" href="https://github.com/JunoLab/Weave.jl/blob/99916dd70ca2d1d69bc6163cc17f6bc480b91a8a/src/config.jl#L46-L50">source</a></section></article><article class="docstring"><header><a class="docstring-binding" id="Weave.restore_chunk_defaults!" href="#Weave.restore_chunk_defaults!"><code>Weave.restore_chunk_defaults!</code></a><span class="docstring-category">Function</span></header><section><div><pre><code class="language-julia">restore_chunk_defaults!()</code></pre><p>Restore Weave.jl default chunk options.</p></div><a class="docs-sourcelink" target="_blank" href="https://github.com/JunoLab/Weave.jl/blob/99916dd70ca2d1d69bc6163cc17f6bc480b91a8a/src/config.jl#L53-L57">source</a></section></article></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../publish/">« Publishing to HTML and PDF</a><a class="docs-footer-nextpage" href="../header/">Header Configuration »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <span class="colophon-date" title="Thursday 29 April 2021 12:21">Thursday 29 April 2021</span>. Using Julia version 1.5.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>

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@ -10,4 +10,4 @@ weave(filename; doctype = &quot;md2html&quot;, out_path = :pwd)
weave(filename; doctype = &quot;md2pdf&quot;, out_path = :pwd)
# Julia markdown to Pandoc markdown
weave(filename; doctype = &quot;pandoc&quot;, out_path = :pwd)</code></pre><div class="admonition is-category-tips"><header class="admonition-header">Tips</header><div class="admonition-body"><p><code>Weave.EXAMPLE_FOLDER</code> points to <a href="https://github.com/JunoLab/Weave.jl/tree/master/examples">the <code>examples</code> directory</a>.</p></div></div></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../">« Weave.jl - Scientific Reports Using Julia</a><a class="docs-footer-nextpage" href="../usage/">Using Weave »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <span class="colophon-date" title="Saturday 13 March 2021 18:56">Saturday 13 March 2021</span>. Using Julia version 1.5.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
weave(filename; doctype = &quot;pandoc&quot;, out_path = :pwd)</code></pre><div class="admonition is-category-tips"><header class="admonition-header">Tips</header><div class="admonition-body"><p><code>Weave.EXAMPLE_FOLDER</code> points to <a href="https://github.com/JunoLab/Weave.jl/tree/master/examples">the <code>examples</code> directory</a>.</p></div></div></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../">« Weave.jl - Scientific Reports Using Julia</a><a class="docs-footer-nextpage" href="../usage/">Using Weave »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <span class="colophon-date" title="Thursday 29 April 2021 12:21">Thursday 29 April 2021</span>. Using Julia version 1.5.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>

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@ -27,4 +27,4 @@ weave_options:
md2pdf:
out_path : pdf
fig_ext : .png
---</code></pre></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../chunk_options/">« Chunk Options</a><a class="docs-footer-nextpage" href="../notebooks/">Working with Jupyter notebooks »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <span class="colophon-date" title="Saturday 13 March 2021 18:55">Saturday 13 March 2021</span>. Using Julia version 1.5.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
---</code></pre></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../chunk_options/">« Chunk Options</a><a class="docs-footer-nextpage" href="../notebooks/">Working with Jupyter notebooks »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <span class="colophon-date" title="Thursday 29 April 2021 12:21">Thursday 29 April 2021</span>. Using Julia version 1.5.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>

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@ -6,4 +6,4 @@ date: 15th December 2016
---</code></pre><p>Here are sample input and outputs:</p><ul><li>input (Julia markdown format): <a href="../examples/FIR_design_plots.jl"><code>FIR_design_plots.jl</code></a> (its path is bound to <code>Weave.SAMPLE_JL_DOC</code>)</li><li>HTML output: <a href="../examples/FIR_design_plots.html"><code>FIR_design_plots.html</code></a></li><li>PDF output: <a href="../examples/FIR_design_plots.pdf"><code>FIR_design_plots.pdf</code></a></li></ul><p>They are generated as follows:</p><pre><code class="language-julia">weave(Weave.SAMPLE_JL_DOC)) # default to md2html output format
weave(Weave.SAMPLE_JL_DOC; doctype = &quot;md2pdf&quot;)</code></pre><div class="admonition is-category-tips"><header class="admonition-header">Tips</header><div class="admonition-body"><p><code>Weave.SAMPLE_JL_DOC</code> is the path of <a href="../examples/FIR_design.jl">FIR_design.jl</a>.</p></div></div><div class="admonition is-info"><header class="admonition-header">Note</header><div class="admonition-body"><p><code>&quot;md2html&quot;</code> and <code>&quot;md2pdf&quot;</code> assume Julia markdown format as an input, while <code>pandoc2pdf</code> and <code>pandoc2html</code> assume Noweb input format (i.e. Pandoc markdown).</p></div></div><h2 id="Templates"><a class="docs-heading-anchor" href="#Templates">Templates</a><a id="Templates-1"></a><a class="docs-heading-anchor-permalink" href="#Templates" title="Permalink"></a></h2><p>You can use a custom template with <code>md2html</code> and <code>md2pdf</code> formats with <code>template</code> keyword option, e.g.: <code>weave(&quot;FIR_design_plots.jl&quot;, template = &quot;custom.tpl&quot;</code>.</p><p>As starting point, you can use the existing templates:</p><ul><li>HTML (<code>md2html</code>): <a href="https://github.com/JunoLab/Weave.jl/blob/master/templates/md2html.tpl"><code>md2html.tpl</code></a></li><li>LaTex (<code>md2pdf</code>): <a href="https://github.com/JunoLab/Weave.jl/blob/master/templates/md2pdf.tpl"><code>md2pdf.tpl</code></a></li></ul><p>Templates are rendered using <a href="https://github.com/jverzani/Mustache.jl">Mustache.jl</a>.</p><h2 id="Supported-Markdown-syntax"><a class="docs-heading-anchor" href="#Supported-Markdown-syntax">Supported Markdown syntax</a><a id="Supported-Markdown-syntax-1"></a><a class="docs-heading-anchor-permalink" href="#Supported-Markdown-syntax" title="Permalink"></a></h2><p>The markdown variant used by Weave is <a href="https://docs.julialang.org/en/v1/stdlib/Markdown/#">Julia markdown</a>. In addition Weave supports few additional Markdown features:</p><h3 id="Comments"><a class="docs-heading-anchor" href="#Comments">Comments</a><a id="Comments-1"></a><a class="docs-heading-anchor-permalink" href="#Comments" title="Permalink"></a></h3><p>You can add comments using html syntax: <code>&lt;!-- --&gt;</code></p><h3 id="Multiline-equations"><a class="docs-heading-anchor" href="#Multiline-equations">Multiline equations</a><a id="Multiline-equations-1"></a><a class="docs-heading-anchor-permalink" href="#Multiline-equations" title="Permalink"></a></h3><p>You can add multiline equations using:</p><pre><code class="language-none">$$
x^2 = x*x
$$</code></pre></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../usage/">« Using Weave</a><a class="docs-footer-nextpage" href="../chunk_options/">Chunk Options »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <span class="colophon-date" title="Saturday 13 March 2021 18:55">Saturday 13 March 2021</span>. Using Julia version 1.5.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
$$</code></pre></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../usage/">« Using Weave</a><a class="docs-footer-nextpage" href="../chunk_options/">Chunk Options »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> on <span class="colophon-date" title="Thursday 29 April 2021 12:21">Thursday 29 April 2021</span>. Using Julia version 1.5.4.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>

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@ -1,2 +1,2 @@
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