diff --git a/Project.toml b/Project.toml index 94389f7..bea5a43 100644 --- a/Project.toml +++ b/Project.toml @@ -9,8 +9,7 @@ Dates = "ade2ca70-3891-5945-98fb-dc099432e06a" Base64 = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" REPL = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb" Compat = "34da2185-b29b-5c13-b0c7-acf172513d20" -JLD2 = "033835bb-8acc-5ee8-8aae-3f567f8a3819" -FileIO = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" +Serialization = "9e88b42a-f829-5b0c-bbe9-9e923198166b" JSON = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" Highlights = "eafb193a-b7ab-5a9e-9068-77385905fa72" Mustache = "ffc61752-8dc7-55ee-8c37-f3e9cdd09e70" diff --git a/REQUIRE b/REQUIRE index b786414..f046501 100644 --- a/REQUIRE +++ b/REQUIRE @@ -1,6 +1,5 @@ julia 0.7 -JLD2 -FileIO +Serialization JSON Highlights 0.3.0 Mustache diff --git a/src/cache.jl b/src/cache.jl index 173adca..0584681 100644 --- a/src/cache.jl +++ b/src/cache.jl @@ -1,16 +1,21 @@ -#FileIO and JLD2 are imported only if cache is used +#Serialization is imported only if cache is used function write_cache(doc::WeaveDoc, cache_path) cache_dir = joinpath(doc.cwd, cache_path) isdir(cache_dir) || mkpath(cache_dir) - Base.invokelatest(FileIO.save, joinpath(cache_dir, doc.basename * ".jld2"), Dict("doc" => doc)) + open(joinpath(cache_dir, doc.basename * ".cache"),"w") do io + Serialization.serialize(io, doc) + end return nothing end function read_cache(doc::WeaveDoc, cache_path) - name = joinpath(doc.cwd, cache_path, doc.basename * ".jld2") + name = joinpath(doc.cwd, cache_path, doc.basename * ".cache") isfile(name) || return nothing - return Base.invokelatest(FileIO.load, name, "doc") + open(name,"r") do io + doc = Serialization.deserialize(io) + end + return doc end function restore_chunk(chunk::CodeChunk, cached) @@ -35,7 +40,7 @@ end #Restore inline code function restore_chunk(chunk::DocChunk, cached::WeaveDoc) #Get chunk from cached doc - c_chunk = filter(x -> x.number == chunk.number && + c_chunk = filter(x -> x.number == chunk.number && isa(x, DocChunk), cached.chunks) isempty(c_chunk) && return chunk c_chunk = c_chunk[1] @@ -45,7 +50,7 @@ function restore_chunk(chunk::DocChunk, cached::WeaveDoc) isempty(c_inline) && return chunk #Restore cached results for Inline code - n = length(chunk.content) + n = length(chunk.content) for i in 1:n if isa(chunk.content[i], InlineCode) ci = filter(x -> x.number == chunk.content[i].number, c_inline) diff --git a/src/run.jl b/src/run.jl index d0b1c89..56e2a6e 100644 --- a/src/run.jl +++ b/src/run.jl @@ -41,7 +41,7 @@ function Base.run(doc::WeaveDoc; doctype = :auto, fig_path = mktempdir(abspath(doc.cwd)) end - cache == :off || @eval import FileIO, JLD2 + cache == :off || @eval import Serialization #This is needed for latex and should work on all output formats Sys.iswindows() && (fig_path = replace(fig_path, "\\" => "/")) diff --git a/test/errors_test.jl b/test/errors_test.jl index 2a284fa..f973da3 100644 --- a/test/errors_test.jl +++ b/test/errors_test.jl @@ -26,8 +26,7 @@ doc1 = Weave.run(doc, doctype = "pandoc") doc1.chunks[1].output -@test doc1.chunks[1].output == "Error: ArgumentError: Package NonExisting not found in current path:\n- Run `Pkg.add(\"NonExisting\")` to install the NonExisting package.\n\n" - +@test doc1.chunks[1].output == "Error: ArgumentError: Package NonExisting not found in current path:\n- Run `import Pkg; Pkg.add(\"NonExisting\")` to install the NonExisting package.\n\n" @test doc1.chunks[2].output == "Error: syntax: incomplete: premature end of input\n" @test doc1.chunks[3].output == "\njulia> plot(x)\nError: UndefVarError: plot not defined\n\njulia> y = 10\n10\n\njulia> print(y\nError: syntax: incomplete: premature end of input\n" @@ -35,7 +34,7 @@ doc1.chunks[1].output doc = Weave.WeaveDoc("dummy1.jmd", p1, Dict()) doc3 = Weave.run(doc, doctype = "md2html") -@test doc3.chunks[1].rich_output == "
\nERROR: ArgumentError: Package NonExisting not found in current path:\n- Run `Pkg.add("NonExisting")` to install the NonExisting package.\n\n
\n" +@test doc3.chunks[1].rich_output == "
\nERROR: ArgumentError: Package NonExisting not found in current path:\n- Run `import Pkg; Pkg.add("NonExisting")` to install the NonExisting package.\n\n
\n" @test doc3.chunks[2].rich_output == "
\nERROR: syntax: incomplete: premature end of input\n
\n" @test doc3.chunks[3].output == "\njulia> plot(x)\nError: UndefVarError: plot not defined\n\njulia> y = 10\n10\n\njulia> print(y\nError: syntax: incomplete: premature end of input\n" @test doc3.chunks[3].rich_output == "" diff --git a/test/plotsjl_test.jl b/test/plotsjl_test.jl index e395fbb..b3f26fb 100644 --- a/test/plotsjl_test.jl +++ b/test/plotsjl_test.jl @@ -11,3 +11,12 @@ end pljtest("plotsjl_test_gr.jmd", "plotsjl_test_gr.md", "pandoc") pljtest("plotsjl_test_gr.jmd", "plotsjl_test_gr.tex", "tex") + +# test cache with plots +isdir("documents/cache") && rm("documents/cache", recursive = true) +weave("documents/plotsjl_test_gr.jmd", cache=:all) +result = read("documents/plotsjl_test_gr.html", String) +rm("documents/plotsjl_test_gr.html") +weave("documents/plotsjl_test_gr.jmd", cache=:all) +cached_result = read("documents/plotsjl_test_gr.html", String) +@test result == cached_result