gnu: Add seqPattern.
* gnu/packages/bioinformatics.scm (r-seqpattern): New variable.
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@ -3886,6 +3886,32 @@ genome data packages and support for efficient SNP representation.")
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microarray data, using nearest neighbor averaging.")
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microarray data, using nearest neighbor averaging.")
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(license license:gpl2+)))
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(license license:gpl2+)))
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(define-public r-seqpattern
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(package
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(name "r-seqpattern")
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(version "1.2.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "seqPattern" version))
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(sha256
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(base32
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"0p9zj6bic7sa0hb2bjm988kkk5n9r1kvlbqkzvy702f642n0j53i"))))
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(properties
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`((upstream-name . "seqPattern")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biostrings" ,r-biostrings)
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("r-genomicranges" ,r-genomicranges)
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("r-iranges" ,r-iranges)
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("r-plotrix" ,r-plotrix)))
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(home-page "http://bioconductor.org/packages/seqPattern")
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(synopsis "Visualising oligonucleotide patterns and motif occurrences")
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(description
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"This package provides tools to visualize oligonucleotide patterns and
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sequence motif occurrences across a large set of sequences centred at a common
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reference point and sorted by a user defined feature.")
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(license license:gpl3+)))
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(define-public r-qtl
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(define-public r-qtl
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(package
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(package
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(name "r-qtl")
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(name "r-qtl")
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