From 08eafef8650922681bad10d9f5a3f92ff91616b6 Mon Sep 17 00:00:00 2001 From: Leo Famulari Date: Tue, 14 May 2019 18:38:23 -0400 Subject: [PATCH] gnu: Borg: Fix a hang in the test suite. * gnu/packages/patches/borg-fix-hard-link-preloading.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/backup.scm (borg)[source]: Use it. --- gnu/local.mk | 1 + gnu/packages/backup.scm | 1 + .../borg-fix-hard-link-preloading.patch | 157 ++++++++++++++++++ 3 files changed, 159 insertions(+) create mode 100644 gnu/packages/patches/borg-fix-hard-link-preloading.patch diff --git a/gnu/local.mk b/gnu/local.mk index e76e387e42..ac55e1dd28 100644 --- a/gnu/local.mk +++ b/gnu/local.mk @@ -686,6 +686,7 @@ dist_patch_DATA = \ %D%/packages/patches/blender-2.79-newer-ffmpeg.patch \ %D%/packages/patches/blender-2.79-python-3.7-fix.patch \ %D%/packages/patches/boost-fix-icu-build.patch \ + %D%/packages/patches/borg-fix-hard-link-preloading.patch \ %D%/packages/patches/byobu-writable-status.patch \ %D%/packages/patches/calibre-no-updates-dialog.patch \ %D%/packages/patches/calibre-remove-test-bs4.patch \ diff --git a/gnu/packages/backup.scm b/gnu/packages/backup.scm index 97c7499c1c..b15c15ad46 100644 --- a/gnu/packages/backup.scm +++ b/gnu/packages/backup.scm @@ -519,6 +519,7 @@ detection, and lossless compression.") (sha256 (base32 "0x95nhv4h34m8cxycbwc4xdz350saaxlgh727b23bgn4ci7gh3vx")) + (patches (search-patches "borg-fix-hard-link-preloading.patch")) (modules '((guix build utils))) (snippet '(begin diff --git a/gnu/packages/patches/borg-fix-hard-link-preloading.patch b/gnu/packages/patches/borg-fix-hard-link-preloading.patch new file mode 100644 index 0000000000..92a4e22674 --- /dev/null +++ b/gnu/packages/patches/borg-fix-hard-link-preloading.patch @@ -0,0 +1,157 @@ +Fix a bug that would cause the test suite to hang: + +https://github.com/borgbackup/borg/issues/4350 + +Patch copied from upstream source repository: + +https://github.com/borgbackup/borg/commit/18242ab9e2f26c450b8507aa1d5eceadab8ad027 + +From 18242ab9e2f26c450b8507aa1d5eceadab8ad027 Mon Sep 17 00:00:00 2001 +From: Thomas Waldmann +Date: Thu, 2 May 2019 21:02:26 +0200 +Subject: [PATCH] preload chunks for hardlink slaves w/o preloaded master, + fixes #4350 + +also split the hardlink extraction test into 2 tests. + +(cherry picked from commit f33f318d816505161d1449a02ddfdeb97d6fe80a) +--- + src/borg/archive.py | 42 +++++++++++++++++++++++++++++----- + src/borg/archiver.py | 5 ++-- + src/borg/testsuite/archiver.py | 20 +++++++++------- + 3 files changed, 51 insertions(+), 16 deletions(-) + +diff --git a/src/borg/archive.py b/src/borg/archive.py +index adc1f42c..0793672a 100644 +--- a/src/borg/archive.py ++++ b/src/borg/archive.py +@@ -192,7 +192,7 @@ def __init__(self, repository, key): + self.repository = repository + self.key = key + +- def unpack_many(self, ids, filter=None, preload=False): ++ def unpack_many(self, ids, filter=None, partial_extract=False, preload=False, hardlink_masters=None): + """ + Return iterator of items. + +@@ -209,12 +209,40 @@ def unpack_many(self, ids, filter=None, preload=False): + for item in items: + if 'chunks' in item: + item.chunks = [ChunkListEntry(*e) for e in item.chunks] ++ ++ def preload(chunks): ++ self.repository.preload([c.id for c in chunks]) ++ + if filter: + items = [item for item in items if filter(item)] ++ + if preload: +- for item in items: +- if 'chunks' in item: +- self.repository.preload([c.id for c in item.chunks]) ++ if filter and partial_extract: ++ # if we do only a partial extraction, it gets a bit ++ # complicated with computing the preload items: if a hardlink master item is not ++ # selected (== not extracted), we will still need to preload its chunks if a ++ # corresponding hardlink slave is selected (== is extracted). ++ # due to a side effect of the filter() call, we now have hardlink_masters dict populated. ++ masters_preloaded = set() ++ for item in items: ++ if 'chunks' in item: # regular file, maybe a hardlink master ++ preload(item.chunks) ++ # if this is a hardlink master, remember that we already preloaded it: ++ if 'source' not in item and hardlinkable(item.mode) and item.get('hardlink_master', True): ++ masters_preloaded.add(item.path) ++ elif 'source' in item and hardlinkable(item.mode): # hardlink slave ++ source = item.source ++ if source not in masters_preloaded: ++ # we only need to preload *once* (for the 1st selected slave) ++ chunks, _ = hardlink_masters[source] ++ preload(chunks) ++ masters_preloaded.add(source) ++ else: ++ # easy: we do not have a filter, thus all items are selected, thus we need to preload all chunks. ++ for item in items: ++ if 'chunks' in item: ++ preload(item.chunks) ++ + for item in items: + yield item + +@@ -433,8 +461,10 @@ def item_filter(self, item, filter=None): + return False + return filter(item) if filter else True + +- def iter_items(self, filter=None, preload=False): +- for item in self.pipeline.unpack_many(self.metadata.items, preload=preload, ++ def iter_items(self, filter=None, partial_extract=False, preload=False, hardlink_masters=None): ++ assert not (filter and partial_extract and preload) or hardlink_masters is not None ++ for item in self.pipeline.unpack_many(self.metadata.items, partial_extract=partial_extract, ++ preload=preload, hardlink_masters=hardlink_masters, + filter=lambda item: self.item_filter(item, filter)): + yield item + +diff --git a/src/borg/archiver.py b/src/borg/archiver.py +index 957959d6..dcc20455 100644 +--- a/src/borg/archiver.py ++++ b/src/borg/archiver.py +@@ -755,7 +755,8 @@ def peek_and_store_hardlink_masters(item, matched): + else: + pi = None + +- for item in archive.iter_items(filter, preload=True): ++ for item in archive.iter_items(filter, partial_extract=partial_extract, ++ preload=True, hardlink_masters=hardlink_masters): + orig_path = item.path + if strip_components: + item.path = os.sep.join(orig_path.split(os.sep)[strip_components:]) +@@ -997,7 +998,7 @@ def item_to_tarinfo(item, original_path): + return None, stream + return tarinfo, stream + +- for item in archive.iter_items(filter, preload=True): ++ for item in archive.iter_items(filter, preload=True, hardlink_masters=hardlink_masters): + orig_path = item.path + if strip_components: + item.path = os.sep.join(orig_path.split(os.sep)[strip_components:]) +diff --git a/src/borg/testsuite/archiver.py b/src/borg/testsuite/archiver.py +index c35ad800..935b3d79 100644 +--- a/src/borg/testsuite/archiver.py ++++ b/src/borg/testsuite/archiver.py +@@ -823,7 +823,18 @@ def test_mount_hardlinks(self): + assert open('input/dir1/subdir/hardlink', 'rb').read() == b'123456' + + @requires_hardlinks +- def test_extract_hardlinks(self): ++ def test_extract_hardlinks1(self): ++ self._extract_hardlinks_setup() ++ with changedir('output'): ++ self.cmd('extract', self.repository_location + '::test') ++ assert os.stat('input/source').st_nlink == 4 ++ assert os.stat('input/abba').st_nlink == 4 ++ assert os.stat('input/dir1/hardlink').st_nlink == 4 ++ assert os.stat('input/dir1/subdir/hardlink').st_nlink == 4 ++ assert open('input/dir1/subdir/hardlink', 'rb').read() == b'123456' ++ ++ @requires_hardlinks ++ def test_extract_hardlinks2(self): + self._extract_hardlinks_setup() + with changedir('output'): + self.cmd('extract', self.repository_location + '::test', '--strip-components', '2') +@@ -839,13 +850,6 @@ def test_extract_hardlinks(self): + assert open('input/dir1/subdir/hardlink', 'rb').read() == b'123456' + assert os.stat('input/dir1/aaaa').st_nlink == 2 + assert os.stat('input/dir1/source2').st_nlink == 2 +- with changedir('output'): +- self.cmd('extract', self.repository_location + '::test') +- assert os.stat('input/source').st_nlink == 4 +- assert os.stat('input/abba').st_nlink == 4 +- assert os.stat('input/dir1/hardlink').st_nlink == 4 +- assert os.stat('input/dir1/subdir/hardlink').st_nlink == 4 +- assert open('input/dir1/subdir/hardlink', 'rb').read() == b'123456' + + def test_extract_include_exclude(self): + self.cmd('init', '--encryption=repokey', self.repository_location) +-- +2.21.0 +