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Merge branch 'master' into core-updates

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Mark H Weaver 2017-08-15 03:10:14 -04:00
parent 3785e42e52 2d430f2923
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19
.mailmap
View File

@ -42,15 +42,16 @@ Mathieu Lirzin <mthl@gnu.org> <mthl@openmailbox.org>
Mathieu Lirzin <mthl@gnu.org> <mathieu.lirzin@openmailbox.org> Mathieu Lirzin <mthl@gnu.org> <mathieu.lirzin@openmailbox.org>
Mathieu Othacehe <m.othacehe@gmail.com> Mathieu Othacehe <m.othacehe@gmail.com>
Nikita Karetnikov <nikita@karetnikov.org> <nikita.karetnikov@gmail.com> Nikita Karetnikov <nikita@karetnikov.org> <nikita.karetnikov@gmail.com>
ng0 <ng0@no-reply.infotropique.org> ng0 <ng0@infotropique.org>
ng0 <ng0@no-reply.infotropique.org> <ng0@no-reply.pragmatique.xyz> ng0 <ng0@infotropique.org> <ng0@no-reply.infotropique.org>
ng0 <ng0@no-reply.infotropique.org> <ng0@pragmatique.xyz> ng0 <ng0@infotropique.org> <ng0@no-reply.pragmatique.xyz>
ng0 <ng0@no-reply.infotropique.org> <contact.ng0@cryptolab.net> ng0 <ng0@infotropique.org> <ng0@pragmatique.xyz>
ng0 <ng0@no-reply.infotropique.org> <ng0@we.make.ritual.n0.is> ng0 <ng0@infotropique.org> <contact.ng0@cryptolab.net>
ng0 <ng0@no-reply.infotropique.org> <ngillmann@runbox.com> ng0 <ng0@infotropique.org> <ng0@we.make.ritual.n0.is>
ng0 <ng0@no-reply.infotropique.org> <niasterisk@grrlz.net> ng0 <ng0@infotropique.org> <ngillmann@runbox.com>
ng0 <ng0@no-reply.infotropique.org> <ng@niasterisk.space> ng0 <ng0@infotropique.org> <niasterisk@grrlz.net>
ng0 <ng0@no-reply.infotropique.org> <ng0@libertad.pw> ng0 <ng0@infotropique.org> <ng@niasterisk.space>
ng0 <ng0@infotropique.org> <ng0@libertad.pw>
Pjotr Prins <pjotr.guix@thebird.nl> <pjotr.public01@thebird.nl> Pjotr Prins <pjotr.guix@thebird.nl> <pjotr.public01@thebird.nl>
Pjotr Prins <pjotr.guix@thebird.nl> <pjotr.public12@thebird.nl> Pjotr Prins <pjotr.guix@thebird.nl> <pjotr.public12@thebird.nl>
Pjotr Prins <pjotr.guix@thebird.nl> <pjotr.public12@email> Pjotr Prins <pjotr.guix@thebird.nl> <pjotr.public12@email>

56
doc/guix.texi
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@ -227,6 +227,7 @@ Services
* Network File System:: NFS related services. * Network File System:: NFS related services.
* Continuous Integration:: The Cuirass service. * Continuous Integration:: The Cuirass service.
* Power management Services:: The TLP tool. * Power management Services:: The TLP tool.
* Audio Services:: The MPD.
* Miscellaneous Services:: Other services. * Miscellaneous Services:: Other services.
Defining Services Defining Services
@ -9024,7 +9025,7 @@ declaration.
* X Window:: Graphical display. * X Window:: Graphical display.
* Printing Services:: Local and remote printer support. * Printing Services:: Local and remote printer support.
* Desktop Services:: D-Bus and desktop services. * Desktop Services:: D-Bus and desktop services.
* Database Services:: SQL databases. * Database Services:: SQL databases, key-value stores, etc.
* Mail Services:: IMAP, POP3, SMTP, and all that. * Mail Services:: IMAP, POP3, SMTP, and all that.
* Messaging Services:: Messaging services. * Messaging Services:: Messaging services.
* Monitoring Services:: Monitoring services. * Monitoring Services:: Monitoring services.
@ -9035,6 +9036,7 @@ declaration.
* Network File System:: NFS related services. * Network File System:: NFS related services.
* Continuous Integration:: The Cuirass service. * Continuous Integration:: The Cuirass service.
* Power management Services:: The TLP tool. * Power management Services:: The TLP tool.
* Audio Services:: The MPD.
* Miscellaneous Services:: Other services. * Miscellaneous Services:: Other services.
@end menu @end menu
@ -15635,6 +15637,58 @@ Package object of thermald.
@end table @end table
@end deftp @end deftp
@node Audio Services
@subsubsection Audio Services
The @code{(gnu services audio)} module provides a service to start MPD
(the Music Player Daemon).
@cindex mpd
@subsubheading Music Player Daemon
The Music Player Daemon (MPD) is a service that can play music while
being controlled from the local machine or over the network by a variety
of clients.
The following example shows how one might run @code{mpd} as user
@code{"bob"} on port @code{6666}. It uses pulseaudio for output.
@example
(service mpd-service-type
(mpd-configuration
(user "bob")
(port "6666")))
@end example
@defvr {Scheme Variable} mpd-service-type
The service type for @command{mpd}
@end defvr
@deftp {Data Type} mpd-configuration
Data type representing the configuration of @command{mpd}.
@table @asis
@item @code{user} (default: @code{"mpd"})
The user to run mpd as.
@item @code{music-dir} (default: @code{"~/Music"})
The directory to scan for music files.
@item @code{playlist-dir} (default: @code{"~/.mpd/playlists"})
The directory to store playlists.
@item @code{pid-file} (default: @code{"/var/run/mpd.pid"})
The file mpd wil store its PID. This must be an absolute path.
@item @code{port} (default: @code{"6600"})
The port to run mpd on.
@item @code{address} (default: @code{"any"})
The address that mpd will bind to. To use a Unix domain socket,
an absolute path can be specified here.
@end table
@end deftp
@node Miscellaneous Services @node Miscellaneous Services
@subsubsection Miscellaneous Services @subsubsection Miscellaneous Services

10
gnu/local.mk
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@ -426,6 +426,7 @@ GNU_SYSTEM_MODULES = \
\ \
%D%/services.scm \ %D%/services.scm \
%D%/services/admin.scm \ %D%/services/admin.scm \
%D%/services/audio.scm \
%D%/services/avahi.scm \ %D%/services/avahi.scm \
%D%/services/base.scm \ %D%/services/base.scm \
%D%/services/configuration.scm \ %D%/services/configuration.scm \
@ -481,6 +482,7 @@ GNU_SYSTEM_MODULES = \
\ \
%D%/tests.scm \ %D%/tests.scm \
%D%/tests/admin.scm \ %D%/tests/admin.scm \
%D%/tests/audio.scm \
%D%/tests/base.scm \ %D%/tests/base.scm \
%D%/tests/databases.scm \ %D%/tests/databases.scm \
%D%/tests/dict.scm \ %D%/tests/dict.scm \
@ -533,6 +535,7 @@ dist_patch_DATA = \
%D%/packages/patches/calibre-drop-unrar.patch \ %D%/packages/patches/calibre-drop-unrar.patch \
%D%/packages/patches/calibre-no-updates-dialog.patch \ %D%/packages/patches/calibre-no-updates-dialog.patch \
%D%/packages/patches/calibre-use-packaged-feedparser.patch \ %D%/packages/patches/calibre-use-packaged-feedparser.patch \
%D%/packages/patches/catdoc-CVE-2017-11110.patch \
%D%/packages/patches/cdparanoia-fpic.patch \ %D%/packages/patches/cdparanoia-fpic.patch \
%D%/packages/patches/cdrtools-3.01-mkisofs-isoinfo.patch \ %D%/packages/patches/cdrtools-3.01-mkisofs-isoinfo.patch \
%D%/packages/patches/ceph-disable-cpu-optimizations.patch \ %D%/packages/patches/ceph-disable-cpu-optimizations.patch \
@ -562,7 +565,9 @@ dist_patch_DATA = \
%D%/packages/patches/crossmap-allow-system-pysam.patch \ %D%/packages/patches/crossmap-allow-system-pysam.patch \
%D%/packages/patches/csound-header-ordering.patch \ %D%/packages/patches/csound-header-ordering.patch \
%D%/packages/patches/clucene-contribs-lib.patch \ %D%/packages/patches/clucene-contribs-lib.patch \
%D%/packages/patches/curl-bounds-check.patch \
%D%/packages/patches/cursynth-wave-rand.patch \ %D%/packages/patches/cursynth-wave-rand.patch \
%D%/packages/patches/cvs-2017-12836.patch \
%D%/packages/patches/cyrus-sasl-CVE-2013-4122.patch \ %D%/packages/patches/cyrus-sasl-CVE-2013-4122.patch \
%D%/packages/patches/dblatex-remove-multirow.patch \ %D%/packages/patches/dblatex-remove-multirow.patch \
%D%/packages/patches/dbus-helper-search-path.patch \ %D%/packages/patches/dbus-helper-search-path.patch \
@ -573,6 +578,7 @@ dist_patch_DATA = \
%D%/packages/patches/doc++-segfault-fix.patch \ %D%/packages/patches/doc++-segfault-fix.patch \
%D%/packages/patches/doxygen-test.patch \ %D%/packages/patches/doxygen-test.patch \
%D%/packages/patches/dvd+rw-tools-add-include.patch \ %D%/packages/patches/dvd+rw-tools-add-include.patch \
%D%/packages/patches/e2fsprogs-32bit-quota-warnings.patch \
%D%/packages/patches/elfutils-tests-ptrace.patch \ %D%/packages/patches/elfutils-tests-ptrace.patch \
%D%/packages/patches/elixir-disable-failing-tests.patch \ %D%/packages/patches/elixir-disable-failing-tests.patch \
%D%/packages/patches/einstein-build.patch \ %D%/packages/patches/einstein-build.patch \
@ -964,7 +970,11 @@ dist_patch_DATA = \
%D%/packages/patches/qemu-CVE-2017-8379.patch \ %D%/packages/patches/qemu-CVE-2017-8379.patch \
%D%/packages/patches/qemu-CVE-2017-8380.patch \ %D%/packages/patches/qemu-CVE-2017-8380.patch \
%D%/packages/patches/qemu-CVE-2017-9524.patch \ %D%/packages/patches/qemu-CVE-2017-9524.patch \
%D%/packages/patches/qemu-CVE-2017-10664.patch \
%D%/packages/patches/qemu-CVE-2017-10806.patch \
%D%/packages/patches/qemu-CVE-2017-10911.patch \
%D%/packages/patches/qemu-CVE-2017-11334.patch \ %D%/packages/patches/qemu-CVE-2017-11334.patch \
%D%/packages/patches/qemu-CVE-2017-11434.patch \
%D%/packages/patches/qt4-ldflags.patch \ %D%/packages/patches/qt4-ldflags.patch \
%D%/packages/patches/qtscript-disable-tests.patch \ %D%/packages/patches/qtscript-disable-tests.patch \
%D%/packages/patches/quagga-reproducible-build.patch \ %D%/packages/patches/quagga-reproducible-build.patch \

106
gnu/packages/bioinformatics.scm
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@ -5796,6 +5796,49 @@ differential expression based on a model using the negative binomial
distribution.") distribution.")
(license license:lgpl3+))) (license license:lgpl3+)))
(define-public r-dexseq
(package
(name "r-dexseq")
(version "1.22.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "DEXSeq" version))
(sha256
(base32
"085aqk1wlzzqcqcqhvz74y099kr2ln5dwdxd3rl6zan806mgwahg"))))
(properties `((upstream-name . "DEXSeq")))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-biocparallel" ,r-biocparallel)
("r-biomart" ,r-biomart)
("r-deseq2" ,r-deseq2)
("r-genefilter" ,r-genefilter)
("r-geneplotter" ,r-geneplotter)
("r-genomicranges" ,r-genomicranges)
("r-hwriter" ,r-hwriter)
("r-iranges" ,r-iranges)
("r-rcolorbrewer" ,r-rcolorbrewer)
("r-rsamtools" ,r-rsamtools)
("r-s4vectors" ,r-s4vectors)
("r-statmod" ,r-statmod)
("r-stringr" ,r-stringr)
("r-summarizedexperiment" ,r-summarizedexperiment)))
(home-page "http://bioconductor.org/packages/DEXSeq")
(synopsis "Inference of differential exon usage in RNA-Seq")
(description
"This package is focused on finding differential exon usage using RNA-seq
exon counts between samples with different experimental designs. It provides
functions that allows the user to make the necessary statistical tests based
on a model that uses the negative binomial distribution to estimate the
variance between biological replicates and generalized linear models for
testing. The package also provides functions for the visualization and
exploration of the results.")
(license license:gpl3+)))
(define-public r-annotationforge (define-public r-annotationforge
(package (package
(name "r-annotationforge") (name "r-annotationforge")
@ -9759,3 +9802,66 @@ such as transcription factor binding sites (ChIP-seq) or regions of open
chromatin (DNase-seq). Output can be displayed directly in the UCSC Genome chromatin (DNase-seq). Output can be displayed directly in the UCSC Genome
Browser.") Browser.")
(license license:gpl3+)))) (license license:gpl3+))))
(define-public bismark
(package
(name "bismark")
(version "0.16.3")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/FelixKrueger/Bismark/"
"archive/" version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1204i0pa02ll2jn5pnxypkclnskvv7a2nwh5nxhagmhxk9wfv9sq"))))
(build-system perl-build-system)
(arguments
`(#:tests? #f ; there are no tests
#:phases
(modify-phases %standard-phases
(delete 'configure)
(delete 'build)
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let ((bin (string-append (assoc-ref outputs "out")
"/bin"))
(docdir (string-append (assoc-ref outputs "out")
"/share/doc/bismark"))
(docs '("Bismark_User_Guide.pdf"
"RELEASE_NOTES.txt"))
(scripts '("bismark"
"bismark_genome_preparation"
"bismark_methylation_extractor"
"bismark2bedGraph"
"bismark2report"
"coverage2cytosine"
"deduplicate_bismark"
"bismark_sitrep.tpl"
"bam2nuc"
"bismark2summary")))
(mkdir-p docdir)
(mkdir-p bin)
(for-each (lambda (file) (install-file file bin))
scripts)
(for-each (lambda (file) (install-file file docdir))
docs)
#t))))))
(home-page "http://www.bioinformatics.babraham.ac.uk/projects/bismark/")
(synopsis "Map bisulfite treated sequence reads and analyze methylation")
(description "Bismark is a program to map bisulfite treated sequencing
reads to a genome of interest and perform methylation calls in a single step.
The output can be easily imported into a genome viewer, such as SeqMonk, and
enables a researcher to analyse the methylation levels of their samples
straight away. Its main features are:
@itemize
@item Bisulfite mapping and methylation calling in one single step
@item Supports single-end and paired-end read alignments
@item Supports ungapped and gapped alignments
@item Alignment seed length, number of mismatches etc are adjustable
@item Output discriminates between cytosine methylation in CpG, CHG
and CHH context
@end itemize\n")
(license license:gpl3+)))

55
gnu/packages/code.scm
View File

@ -5,6 +5,7 @@
;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Clément Lassieur <clement@lassieur.org> ;;; Copyright © 2017 Clément Lassieur <clement@lassieur.org>
;;; Copyright © 2017 Andy Wingo <wingo@igalia.com>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -189,6 +190,60 @@ effort, time, and money it would take to develop the software, using the
COCOMO model or user-provided parameters.") COCOMO model or user-provided parameters.")
(license license:gpl2+))) (license license:gpl2+)))
(define-public cloc
(package
(name "cloc")
(version "1.72")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/AlDanial/cloc/releases/download/v" version
"/cloc-" version ".tar.gz"))
(sha256
(base32
"1gl7bxb4bi6pms0zzl133pzpfypvz57hk2cw7yf6rvs8b48kilnz"))))
(build-system gnu-build-system)
(inputs
`(("coreutils" ,coreutils)
("perl" ,perl)
("perl-algorithm-diff" ,perl-algorithm-diff)
("perl-regexp-common" ,perl-regexp-common)
("perl-digest-md5" ,perl-digest-md5)))
(arguments
`(#:phases (modify-phases %standard-phases
(delete 'configure)
(delete 'build)
(replace 'install
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out")))
(zero?
(system* "make" "-C" "Unix"
(string-append "prefix=" out)
(string-append "INSTALL="
(assoc-ref inputs "coreutils")
"/bin/install")
"install")))))
(add-after 'install 'wrap-program
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out")))
(wrap-program (string-append out "/bin/cloc")
`("PERL5LIB" ":" =
,(string-split (getenv "PERL5LIB") #\:)))
#t))))
#:out-of-source? #t
;; Tests require some other packages.
#:tests? #f))
(home-page "https://github.com/AlDanial/cloc")
(synopsis "Count source lines of code (SLOC) and other source code metrics")
(description "cloc counts blank lines, comment lines, and physical lines
of source code in many programming languages. Given two versions of a code
base, cloc can compute differences in blank, comment, and source lines.
cloc contains code from David Wheeler's SLOCCount. Compared to SLOCCount,
cloc can handle a greater variety of programming langauges.")
(license license:gpl2+)))
(define-public the-silver-searcher (define-public the-silver-searcher
(package (package
(name "the-silver-searcher") (name "the-silver-searcher")

128
gnu/packages/crypto.scm
View File

@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU ;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014 David Thompson <davet@gnu.org> ;;; Copyright © 2014 David Thompson <davet@gnu.org>
;;; Copyright © 2015 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2015, 2017 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2016, 2017 Leo Famulari <leo@famulari.name> ;;; Copyright © 2016, 2017 Leo Famulari <leo@famulari.name>
;;; Copyright © 2016 Lukas Gradl <lgradl@openmailbox> ;;; Copyright © 2016 Lukas Gradl <lgradl@openmailbox>
;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr>
@ -52,6 +52,7 @@
#:use-module (guix git-download) #:use-module (guix git-download)
#:use-module (guix build-system cmake) #:use-module (guix build-system cmake)
#:use-module (guix build-system gnu) #:use-module (guix build-system gnu)
#:use-module (guix build-system perl)
#:use-module (guix build-system python)) #:use-module (guix build-system python))
(define-public libsodium (define-public libsodium
@ -437,3 +438,128 @@ PKCS#8, PKCS#12, PKCS#5, X.509 and TSP.")
(define-public python2-asn1crypto (define-public python2-asn1crypto
(package-with-python2 python-asn1crypto)) (package-with-python2 python-asn1crypto))
(define-public perl-math-random-isaac-xs
(package
(name "perl-math-random-isaac-xs")
(version "1.004")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/J/JA/JAWNSY/"
"Math-Random-ISAAC-XS-" version ".tar.gz"))
(sha256
(base32
"0yxqqcqvj51fn7b7j5xqhz65v74arzgainn66c6k7inijbmr1xws"))))
(build-system perl-build-system)
(native-inputs
`(("perl-module-build" ,perl-module-build)
("perl-test-nowarnings" ,perl-test-nowarnings)))
(home-page "http://search.cpan.org/dist/Math-Random-ISAAC-XS")
(synopsis "C implementation of the ISAAC PRNG algorithm")
(description "ISAAC (Indirection, Shift, Accumulate, Add, and Count) is a
fast pseudo-random number generator. It is suitable for applications where a
significant amount of random data needs to be produced quickly, such as
solving using the Monte Carlo method or for games. The results are uniformly
distributed, unbiased, and unpredictable unless you know the seed.
This package implements the same interface as @code{Math::Random::ISAAC}.")
(license license:public-domain)))
(define-public perl-math-random-isaac
(package
(name "perl-math-random-isaac")
(version "1.004")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/J/JA/JAWNSY/"
"Math-Random-ISAAC-" version ".tar.gz"))
(sha256
(base32
"0z1b3xbb3xz71h25fg6jgsccra7migq7s0vawx2rfzi0pwpz0wr7"))))
(build-system perl-build-system)
(native-inputs
`(("perl-test-nowarnings" ,perl-test-nowarnings)))
(propagated-inputs
`(("perl-math-random-isaac-xs" ,perl-math-random-isaac-xs)))
(home-page "http://search.cpan.org/dist/Math-Random-ISAAC")
(synopsis "Perl interface to the ISAAC PRNG algorithm")
(description "ISAAC (Indirection, Shift, Accumulate, Add, and Count) is a
fast pseudo-random number generator. It is suitable for applications where a
significant amount of random data needs to be produced quickly, such as
solving using the Monte Carlo method or for games. The results are uniformly
distributed, unbiased, and unpredictable unless you know the seed.
This package provides a Perl interface to the ISAAC pseudo random number
generator.")
(license license:public-domain)))
(define-public perl-crypt-random-source
(package
(name "perl-crypt-random-source")
(version "0.12")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/E/ET/ETHER/"
"Crypt-Random-Source-" version ".tar.gz"))
(sha256
(base32
"00mw5m52sbz9nqp3f6axyrgcrihqxn7k8gv0vi1kvm1j1nc9g29h"))))
(build-system perl-build-system)
(native-inputs
`(("perl-module-build-tiny" ,perl-module-build-tiny)
("perl-test-exception" ,perl-test-exception)))
(propagated-inputs
`(("perl-capture-tiny" ,perl-capture-tiny)
("perl-module-find" ,perl-module-find)
("perl-module-runtime" ,perl-module-runtime)
("perl-moo" ,perl-moo)
("perl-namespace-clean" ,perl-namespace-clean)
("perl-sub-exporter" ,perl-sub-exporter)
("perl-type-tiny" ,perl-type-tiny)))
(home-page "http://search.cpan.org/dist/Crypt-Random-Source")
(synopsis "Get weak or strong random data from pluggable sources")
(description "This module provides implementations for a number of
byte-oriented sources of random data.")
(license (package-license perl))))
(define-public perl-math-random-secure
(package
(name "perl-math-random-secure")
(version "0.080001")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/F/FR/FREW/"
"Math-Random-Secure-" version ".tar.gz"))
(sha256
(base32
"0dgbf4ncll4kmgkyb9fsaxn0vf2smc9dmwqzgh3259zc2zla995z"))))
(build-system perl-build-system)
(native-inputs
`(("perl-list-moreutils" ,perl-list-moreutils)
("perl-test-leaktrace" ,perl-test-leaktrace)
("perl-test-sharedfork" ,perl-test-sharedfork)
("perl-test-warn" ,perl-test-warn)))
(inputs
`(("perl-crypt-random-source" ,perl-crypt-random-source)
("perl-math-random-isaac" ,perl-math-random-isaac)
("perl-math-random-isaac-xs" ,perl-math-random-isaac-xs)
("perl-moo" ,perl-moo)))
(home-page "http://search.cpan.org/dist/Math-Random-Secure")
(synopsis "Cryptographically secure replacement for rand()")
(description "This module is intended to provide a
cryptographically-secure replacement for Perl's built-in @code{rand} function.
\"Crytographically secure\", in this case, means:
@enumerate
@item No matter how many numbers you see generated by the random number
generator, you cannot guess the future numbers, and you cannot guess the seed.
@item There are so many possible seeds that it would take decades, centuries,
or millenia for an attacker to try them all.
@item The seed comes from a source that generates relatively strong random
data on your platform, so the seed itself will be as random as possible.
@end enumerate\n")
(license license:artistic2.0)))

1
gnu/packages/curl.scm
View File

@ -132,6 +132,7 @@ tunneling, and so on.")
(method url-fetch) (method url-fetch)
(uri (string-append "https://curl.haxx.se/download/curl-" (uri (string-append "https://curl.haxx.se/download/curl-"
version ".tar.xz")) version ".tar.xz"))
(patches (search-patches "curl-bounds-check.patch"))
(sha256 (sha256
(base32 (base32
"1785vxi0jamiv9d1wr1l45g0fm9ircxdfyfzf7ld8zv0z0i8bmfd")))) "1785vxi0jamiv9d1wr1l45g0fm9ircxdfyfzf7ld8zv0z0i8bmfd"))))

17
gnu/packages/emacs.scm
View File

@ -5226,6 +5226,23 @@ multiplexer.")
editing RPM spec files.") editing RPM spec files.")
(license license:gpl2+))) (license license:gpl2+)))
(define-public emacs-nix-mode
(package
(inherit nix)
(name "emacs-nix-mode")
(build-system emacs-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'chdir-elisp
;; Elisp directory is not in root of the source.
(lambda _
(chdir "misc/emacs"))))))
(synopsis "Emacs major mode for editing Nix expressions")
(description "@code{nixos-mode} provides an Emacs major mode for editing
Nix expressions. It supports syntax highlighting, indenting and refilling of
comments.")))
(define-public emacs-git-messenger (define-public emacs-git-messenger
(package (package
(name "emacs-git-messenger") (name "emacs-git-messenger")

6
gnu/packages/enlightenment.scm
View File

@ -59,7 +59,7 @@
(define-public efl (define-public efl
(package (package
(name "efl") (name "efl")
(version "1.20.1") (version "1.20.2")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append (uri (string-append
@ -67,7 +67,7 @@
version ".tar.xz")) version ".tar.xz"))
(sha256 (sha256
(base32 (base32
"1d1wmmwgc8pf6lk9g6lflpdxvg85wxxq650d6m30zgr85cb6d27q")))) "0zll6k4xbbdsxqg53g8jddgv889g5m1xh20i03iz5a52y2bcnh55"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(native-inputs (native-inputs
`(("pkg-config" ,pkg-config))) `(("pkg-config" ,pkg-config)))
@ -123,7 +123,7 @@
("glib" ,glib) ; ecore.pc, ecore-cxx.pc ("glib" ,glib) ; ecore.pc, ecore-cxx.pc
("harfbuzz" ,harfbuzz) ; evas.pc, evas-cxx.pc ("harfbuzz" ,harfbuzz) ; evas.pc, evas-cxx.pc
("luajit" ,luajit) ; elua.pc, evas.pc, evas-cxx.pc ("luajit" ,luajit) ; elua.pc, evas.pc, evas-cxx.pc
("libinput" ,libinput) ; elput.pc ("libinput" ,libinput-minimal) ; elput.pc
("libpng" ,libpng) ; evas.pc, evas-cxx.pc ("libpng" ,libpng) ; evas.pc, evas-cxx.pc
("libsndfile" ,libsndfile) ; ecore-audio.pc, ecore-audio-cxx.pc ("libsndfile" ,libsndfile) ; ecore-audio.pc, ecore-audio-cxx.pc
("libxkbcommon" ,libxkbcommon) ; ecore-wl2.pc, elementary.pc, elput.pc ("libxkbcommon" ,libxkbcommon) ; ecore-wl2.pc, elementary.pc, elput.pc

31
gnu/packages/games.scm
View File

@ -17,7 +17,7 @@
;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com> ;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
;;; Copyright © 2016, 2017 Rodger Fox <thylakoid@openmailbox.org> ;;; Copyright © 2016, 2017 Rodger Fox <thylakoid@openmailbox.org>
;;; Copyright © 2016 Manolis Fragkiskos Ragkousis <manolis837@gmail.com> ;;; Copyright © 2016 Manolis Fragkiskos Ragkousis <manolis837@gmail.com>
;;; Copyright © 2016, 2017 ng0 <ng0@no-reply.pragmatique.xyz> ;;; Copyright © 2016, 2017 ng0 <ng0@infotropique.org>
;;; Copyright © 2016 Albin Söderqvist <albin@fripost.org> ;;; Copyright © 2016 Albin Söderqvist <albin@fripost.org>
;;; Copyright © 2016, 2017 Kei Kebreau <kei@openmailbox.org> ;;; Copyright © 2016, 2017 Kei Kebreau <kei@openmailbox.org>
;;; Copyright © 2016 Alex Griffin <a@ajgrf.com> ;;; Copyright © 2016 Alex Griffin <a@ajgrf.com>
@ -99,6 +99,7 @@
#:use-module (gnu packages xorg) #:use-module (gnu packages xorg)
#:use-module (gnu packages pkg-config) #:use-module (gnu packages pkg-config)
#:use-module (gnu packages databases) #:use-module (gnu packages databases)
#:use-module (gnu packages shells)
#:use-module (gnu packages sdl) #:use-module (gnu packages sdl)
#:use-module (gnu packages swig) #:use-module (gnu packages swig)
#:use-module (gnu packages texinfo) #:use-module (gnu packages texinfo)
@ -4564,8 +4565,8 @@ at their peak of economic growth and military prowess.
;; There have been no official releases. ;; There have been no official releases.
(define-public open-adventure (define-public open-adventure
(let* ((commit "2483a23690d205f01ecb66165cf4522b541cd991") (let* ((commit "d43854f0f6bb8e9eea7fbce80348150e7e7fc34d")
(revision "1")) (revision "2"))
(package (package
(name "open-adventure") (name "open-adventure")
(version (string-append "2.5-" revision "." (string-take commit 7))) (version (string-append "2.5-" revision "." (string-take commit 7)))
@ -4577,14 +4578,23 @@ at their peak of economic growth and military prowess.
(file-name (string-append name "-" version "-checkout")) (file-name (string-append name "-" version "-checkout"))
(sha256 (sha256
(base32 (base32
"1gkvkwbq5cl3llfc7nl41van8awn4myx782pg33bxpbx5l9scwb4")))) "08bwrvf4axb1rsfd6ia1fddsky9pc1p350vjskhaakg2czc6dsk0"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:make-flags (list "CC=gcc") `(#:make-flags (list "CC=gcc")
#:parallel-build? #f ; not supported #:parallel-build? #f ; not supported
#:phases #:phases
(modify-phases %standard-phases (modify-phases %standard-phases
(delete 'configure) (replace 'configure
(lambda* (#:key inputs outputs #:allow-other-keys)
;; At this point linenoise is meant to be included,
;; so we have to really copy it into the working directory
;; of s.
(let* ((linenoise (assoc-ref inputs "linenoise"))
(noisepath (string-append linenoise "/include/linenoise"))
(out (assoc-ref outputs "out")))
(copy-recursively noisepath "linenoise"))
#t))
(add-before 'build 'use-echo (add-before 'build 'use-echo
(lambda _ (lambda _
(substitute* "tests/Makefile" (substitute* "tests/Makefile"
@ -4594,9 +4604,9 @@ at their peak of economic growth and military prowess.
(lambda _ (lambda _
;; This target is missing a dependency ;; This target is missing a dependency
(substitute* "Makefile" (substitute* "Makefile"
((".asc.6:" line) ((".adoc.6:" line)
(string-append line " advent.txt"))) (string-append line " advent.adoc")))
(zero? (system* "make" ".asc.6")))) (zero? (system* "make" ".adoc.6"))))
;; There is no install target ;; There is no install target
(replace 'install (replace 'install
(lambda* (#:key outputs #:allow-other-keys) (lambda* (#:key outputs #:allow-other-keys)
@ -4607,7 +4617,10 @@ at their peak of economic growth and military prowess.
(install-file "advent.6" man)) (install-file "advent.6" man))
#t))))) #t)))))
(native-inputs (native-inputs
`(("asciidoc" ,asciidoc))) `(("asciidoc" ,asciidoc)
("linenoise" ,linenoise)
("python" ,python)
("python-pyyaml" ,python-pyyaml)))
(home-page "https://gitlab.com/esr/open-adventure") (home-page "https://gitlab.com/esr/open-adventure")
(synopsis "Colossal Cave Adventure") (synopsis "Colossal Cave Adventure")
(description "The original Colossal Cave Adventure from 1976 was the (description "The original Colossal Cave Adventure from 1976 was the

6
gnu/packages/gcc.scm
View File

@ -406,14 +406,14 @@ Go. It also includes runtime support libraries for these languages.")
(define-public gcc-7 (define-public gcc-7
(package (package
(inherit gcc-6) (inherit gcc-6)
(version "7.1.0") (version "7.2.0")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "mirror://gnu/gcc/gcc-" (uri (string-append "mirror://gnu/gcc/gcc-"
version "/gcc-" version ".tar.bz2")) version "/gcc-" version ".tar.xz"))
(sha256 (sha256
(base32 (base32
"05xwps0ci7wgxh50askpa2r9p8518qxdgh6ad7pnyk7n6p13d0ca")) "16j7i0888j2f1yp9l0nhji6cq65dy6y4nwy8868a8njbzzwavxqw"))
(patches (search-patches "gcc-strmov-store-file-names.patch" (patches (search-patches "gcc-strmov-store-file-names.patch"
"gcc-5.0-libvtv-runpath.patch")))))) "gcc-5.0-libvtv-runpath.patch"))))))

4
gnu/packages/image-viewers.scm
View File

@ -54,7 +54,7 @@
(define-public feh (define-public feh
(package (package
(name "feh") (name "feh")
(version "2.19.1") (version "2.19.2")
(home-page "https://feh.finalrewind.org/") (home-page "https://feh.finalrewind.org/")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
@ -62,7 +62,7 @@
name "-" version ".tar.bz2")) name "-" version ".tar.bz2"))
(sha256 (sha256
(base32 (base32
"1d4ycmai3dpajl0bdr9i56646g4h5j1lb95jjn0nckwcddcj927c")))) "0v2nwc6sk4vs855a1ncz9vxpzxvs1d5wcjz87rfbypxx7nap2al2"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
'(#:phases (alist-delete 'configure %standard-phases) '(#:phases (alist-delete 'configure %standard-phases)

4
gnu/packages/imagemagick.scm
View File

@ -45,14 +45,14 @@
;; The 7 release series has an incompatible API, while the 6 series is still ;; The 7 release series has an incompatible API, while the 6 series is still
;; maintained. Don't update to 7 until we've made sure that the ImageMagick ;; maintained. Don't update to 7 until we've made sure that the ImageMagick
;; users are ready for the 7-series API. ;; users are ready for the 7-series API.
(version "6.9.9-5") (version "6.9.9-7")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "mirror://imagemagick/ImageMagick-" (uri (string-append "mirror://imagemagick/ImageMagick-"
version ".tar.xz")) version ".tar.xz"))
(sha256 (sha256
(base32 (base32
"0mnhwzgap2q2qs899skc41s8gd2g1g6rgs959zxqg6yjx3n48r5a")))) "1lwsz9b8clygdppgawv2hsry4aykgmawjlwhg3fj70rndv4a8rw4"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:configure-flags '("--with-frozenpaths" "--without-gcc-arch") `(#:configure-flags '("--with-frozenpaths" "--without-gcc-arch")

4
gnu/packages/ldc.scm
View File

@ -279,7 +279,7 @@ latest DMD frontend and uses LLVM as backend.")
(define-public dub (define-public dub
(package (package
(name "dub") (name "dub")
(version "1.4.0") (version "1.4.1")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://github.com/dlang/dub/archive/" (uri (string-append "https://github.com/dlang/dub/archive/"
@ -287,7 +287,7 @@ latest DMD frontend and uses LLVM as backend.")
(file-name (string-append name "-" version ".tar.gz")) (file-name (string-append name "-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"1w3pznyjnmsmasrvv93f82l0sr31fpwg2zcj8hh1b2gvc5761qhi")))) "0hpl5srbrzwzv8abc96j4cgbmvm1zhr109ljbl7hrphzzc39zyan"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:tests? #f ; it would have tested itself by installing some packages (vibe etc) `(#:tests? #f ; it would have tested itself by installing some packages (vibe etc)

51
gnu/packages/libreoffice.scm
View File

@ -5,6 +5,7 @@
;;; Copyright © 2017 Alex Griffin <a@ajgrf.com> ;;; Copyright © 2017 Alex Griffin <a@ajgrf.com>
;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be> ;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be>
;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Andy Wingo <wingo@igalia.com>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -898,17 +899,51 @@ and to return information on pronunciations, meanings and synonyms.")
(substitute* "external/libxmlsec/ExternalProject_xmlsec.mk" (substitute* "external/libxmlsec/ExternalProject_xmlsec.mk"
(("./configure") "$(CONFIG_SHELL) ./configure" )) (("./configure") "$(CONFIG_SHELL) ./configure" ))
#t))) #t)))
(add-after 'install 'bin-install (add-after 'install 'bin-and-desktop-install
;; Create 'soffice' and 'libreoffice' symlinks to the executable ;; Create 'soffice' and 'libreoffice' symlinks to the executable
;; script. ;; script.
(lambda* (#:key outputs #:allow-other-keys) (lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out")) (let ((out (assoc-ref outputs "out")))
(bin (string-append out "/bin")) (define (symlink-output src dst)
(soffice (string-append (mkdir-p (dirname (string-append out dst)))
out "/lib/libreoffice/program/soffice"))) (symlink (string-append out src) (string-append out dst)))
(mkdir bin) (define (install src dst)
(symlink soffice (string-append bin "/soffice")) (let ((dst (string-append out dst)))
(symlink soffice (string-append bin "/libreoffice"))) (mkdir-p (dirname dst))
(copy-file src dst)))
(define (install-desktop-file app)
(let ((src (string-append "/lib/libreoffice/share/xdg/"
app ".desktop"))
(dst (string-append "/share/applications/libreoffice-"
app ".desktop")))
(substitute* (string-append out src)
(("Exec=libreoffice[0-9]+\\.[0-9]+ ")
(string-append "Exec=" out "/bin/libreoffice "))
(("Icon=libreoffice[0-9]+\\.[0-9]+")
"Icon=libreoffice")
(("LibreOffice [0-9]+\\.[0-9]+")
"LibreOffice"))
(symlink-output src dst)
(install-file (string-append
"sysui/desktop/appstream-appdata/"
"libreoffice-" app ".appdata.xml")
(string-append out "/share/appdata"))))
(symlink-output "/lib/libreoffice/program/soffice"
"/bin/soffice")
(symlink-output "/lib/libreoffice/program/soffice"
"/bin/libreoffice")
(install "workdir/CustomTarget/sysui/share/libreoffice/openoffice.keys"
"/share/mime-info/libreoffice.keys")
(install "workdir/CustomTarget/sysui/share/libreoffice/openoffice.mime"
"/share/mime-info/libreoffice.mime")
(install
"workdir/CustomTarget/sysui/share/libreoffice/openoffice.org.xml"
"/share/mime/packages/libreoffice.xml")
(for-each install-desktop-file
'("base" "calc" "draw" "impress" "writer"))
(mkdir-p (string-append out "/share/icons"))
(copy-recursively "sysui/desktop/icons/hicolor"
(string-append out "/share/icons/")))
#t))) #t)))
#:configure-flags #:configure-flags
(list (list

17
gnu/packages/linux.scm
View File

@ -366,8 +366,8 @@ It has been modified to remove all non-free binary blobs.")
(define %intel-compatible-systems '("x86_64-linux" "i686-linux")) (define %intel-compatible-systems '("x86_64-linux" "i686-linux"))
(define %linux-libre-version "4.12.5") (define %linux-libre-version "4.12.7")
(define %linux-libre-hash "0kybil1h07fwl9rb0rvmp0w356hi2v1azw603r18vh9x93i8b8xi") (define %linux-libre-hash "1sjkxkcikdgl2w5h7c5pfyqwi29g69dxp4s2z2yavw7aicc91xfq")
(define-public linux-libre (define-public linux-libre
(make-linux-libre %linux-libre-version (make-linux-libre %linux-libre-version
@ -376,14 +376,14 @@ It has been modified to remove all non-free binary blobs.")
#:configuration-file kernel-config)) #:configuration-file kernel-config))
(define-public linux-libre-4.9 (define-public linux-libre-4.9
(make-linux-libre "4.9.41" (make-linux-libre "4.9.43"
"1mkx7rvcny8b0yjkzd8zc53d15h1w8y75m0x6jx0dz3r9y3k0nql" "0fxid4xmnrcq966vz2wsb6spw3i02pvqp2hv8xfrx7dr3hfs9nrr"
%intel-compatible-systems %intel-compatible-systems
#:configuration-file kernel-config)) #:configuration-file kernel-config))
(define-public linux-libre-4.4 (define-public linux-libre-4.4
(make-linux-libre "4.4.80" (make-linux-libre "4.4.82"
"1s0d7lsapghgk6jh6igx2fhzj1f6nwmvhqrl2hdwf3dx14z93mp2" "01bn0vn6i22hhwiqfh29m1cir1jrvz643lz13war8k9l6h0dmmwy"
%intel-compatible-systems %intel-compatible-systems
#:configuration-file kernel-config)) #:configuration-file kernel-config))
@ -682,16 +682,17 @@ slabtop, and skill.")
(define-public e2fsprogs (define-public e2fsprogs
(package (package
(name "e2fsprogs") (name "e2fsprogs")
(version "1.43.4") (version "1.43.5")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append (uri (string-append
"mirror://kernel.org/linux/kernel/people/tytso/" "mirror://kernel.org/linux/kernel/people/tytso/"
name "/v" version "/" name "/v" version "/"
name "-" version ".tar.xz")) name "-" version ".tar.xz"))
(patches (search-patches "e2fsprogs-32bit-quota-warnings.patch"))
(sha256 (sha256
(base32 (base32
"092absr4vrlqrkdf9nwh4ykj40ab6hhwrkdr6sjsccd54c8z5csl")))) "05ssjpmy0fpv2ik6ibm1f47wr6794nf0q50r581vygrqvsd3s7r6"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(inputs `(("util-linux" ,util-linux))) (inputs `(("util-linux" ,util-linux)))
(native-inputs `(("pkg-config" ,pkg-config) (native-inputs `(("pkg-config" ,pkg-config)

53
gnu/packages/maths.scm
View File

@ -2159,7 +2159,7 @@ point numbers.")
(define-public wxmaxima (define-public wxmaxima
(package (package
(name "wxmaxima") (name "wxmaxima")
(version "17.05.0") (version "17.05.1")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
@ -2168,7 +2168,7 @@ point numbers.")
(file-name (string-append name "-" version ".tar.gz")) (file-name (string-append name "-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"1bsyd7r12xm2crpizb9iyyki3j0mbazzzwbsh871m06dv2wk97gq")))) "0dv0cy0cf46v0cbw32izscpkdmpxg1qhwq1f4cz46kkqd8k4yfbj"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(native-inputs (native-inputs
`(("autoconf" ,autoconf) `(("autoconf" ,autoconf)
@ -2182,31 +2182,30 @@ point numbers.")
("gtk+" ,gtk+) ("gtk+" ,gtk+)
("shared-mime-info" ,shared-mime-info))) ("shared-mime-info" ,shared-mime-info)))
(arguments (arguments
`(#:phases (modify-phases %standard-phases `(#:phases
(add-before (modify-phases %standard-phases
'configure 'autoconf (add-after 'unpack 'autoconf
(lambda _ (lambda _
(zero? (system* "./bootstrap")))) (zero? (system* "sh" "bootstrap"))))
(add-after (add-after 'install 'wrap-program
'install 'wrap-program (lambda* (#:key inputs outputs #:allow-other-keys)
(lambda* (#:key inputs outputs #:allow-other-keys) (wrap-program (string-append (assoc-ref outputs "out")
(wrap-program (string-append (assoc-ref outputs "out") "/bin/wxmaxima")
"/bin/wxmaxima") `("PATH" ":" prefix
`("PATH" ":" prefix (,(string-append (assoc-ref inputs "maxima")
(,(string-append (assoc-ref inputs "maxima") "/bin")))
"/bin"))) ;; For GtkFileChooserDialog.
;; For GtkFileChooserDialog. `("GSETTINGS_SCHEMA_DIR" =
`("GSETTINGS_SCHEMA_DIR" = (,(string-append (assoc-ref inputs "gtk+")
(,(string-append (assoc-ref inputs "gtk+") "/share/glib-2.0/schemas")))
"/share/glib-2.0/schemas"))) `("XDG_DATA_DIRS" ":" prefix
`("XDG_DATA_DIRS" ":" prefix (;; Needed by gdk-pixbuf to know supported icon formats.
(;; Needed by gdk-pixbuf to know supported icon formats. ,(string-append
,(string-append (assoc-ref inputs "shared-mime-info") "/share")
(assoc-ref inputs "shared-mime-info") "/share") ;; The default icon theme of GTK+.
;; The default icon theme of GTK+. ,(string-append
,(string-append (assoc-ref inputs "adwaita-icon-theme") "/share"))))
(assoc-ref inputs "adwaita-icon-theme") "/share")))) #t)))))
#t)))))
(home-page "https://andrejv.github.io/wxmaxima/") (home-page "https://andrejv.github.io/wxmaxima/")
(synopsis "Graphical user interface for the Maxima computer algebra system") (synopsis "Graphical user interface for the Maxima computer algebra system")
(description (description

10
gnu/packages/moreutils.scm
View File

@ -52,10 +52,18 @@
("libxml2" ,libxml2) ("libxml2" ,libxml2)
("libxslt" ,libxslt))) ("libxslt" ,libxslt)))
(inputs (inputs
`(("perl" ,perl))) `(("perl" ,perl)
("perl-timedate" ,perl-timedate)
("perl-time-duration" ,perl-time-duration)))
(arguments (arguments
`(#:phases `(#:phases
(modify-phases %standard-phases (modify-phases %standard-phases
(add-after 'install 'wrap-program
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out")))
(wrap-program
(string-append out "/bin/ts")
`("PERL5LIB" ":" prefix (,(getenv "PERL5LIB")))))))
(delete 'configure)) ; no configure script (delete 'configure)) ; no configure script
#:make-flags #:make-flags
(list (string-append "PREFIX=" (assoc-ref %outputs "out")) (list (string-append "PREFIX=" (assoc-ref %outputs "out"))

7
gnu/packages/music.scm
View File

@ -2264,15 +2264,16 @@ of tools for manipulating and accessing your music.")
(define-public milkytracker (define-public milkytracker
(package (package
(name "milkytracker") (name "milkytracker")
(version "1.0.0") (version "1.01.00")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://github.com/milkytracker/" (uri (string-append "https://github.com/milkytracker/"
"MilkyTracker/archive/v" version ".tar.gz")) "MilkyTracker/archive/v"
version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz")) (file-name (string-append name "-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"1p1jd4h274jvcvl05l01v9bj19zhq4sjag92v1zawyi93ib85abz")) "1dvnddsnn9c83lz4dlm0cfjpc0m524amfkbalxbswdy0qc8cj1wv"))
(modules '((guix build utils))) (modules '((guix build utils)))
;; Remove non-FSDG compliant sample songs. ;; Remove non-FSDG compliant sample songs.
(snippet (snippet

45
gnu/packages/patches/catdoc-CVE-2017-11110.patch Normal file
View File

@ -0,0 +1,45 @@
Fix CVE-2017-11110:
https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-11110
https://bugzilla.redhat.com/show_bug.cgi?id=1468471
https://security-tracker.debian.org/tracker/CVE-2017-11110
Patch copied from openSUSE:
https://build.opensuse.org/package/view_file/openSUSE:Maintenance:6985/catdoc.openSUSE_Leap_42.2_Update/CVE-2017-11110.patch?expand=1
From: Andreas Stieger <astieger@suse.com>
Date: Mon, 10 Jul 2017 15:37:58 +0000
References: CVE-2017-11110 http://bugzilla.suse.com/show_bug.cgi?id=1047877
All .doc I found had sectorSize 0x09 at offset 0x1e. Guarding it against <4.
---
src/ole.c | 5 +++++
1 file changed, 5 insertions(+)
Index: catdoc-0.95/src/ole.c
===================================================================
--- catdoc-0.95.orig/src/ole.c 2016-05-25 06:37:12.000000000 +0200
+++ catdoc-0.95/src/ole.c 2017-07-10 17:42:33.578308107 +0200
@@ -106,6 +106,11 @@ FILE* ole_init(FILE *f, void *buffer, si
return NULL;
}
sectorSize = 1<<getshort(oleBuf,0x1e);
+ /* CVE-2017-11110) */
+ if (sectorSize < 4) {
+ fprintf(stderr,"sectorSize < 4 not supported\n");
+ return NULL;
+ }
shortSectorSize=1<<getshort(oleBuf,0x20);
/* Read BBD into memory */
@@ -147,7 +152,7 @@ FILE* ole_init(FILE *f, void *buffer, si
}
fseek(newfile, 512+mblock*sectorSize, SEEK_SET);
- if(fread(tmpBuf+MSAT_ORIG_SIZE+(sectorSize-4)*i,
+ if(fread(tmpBuf+MSAT_ORIG_SIZE+(sectorSize-4)*i, /* >= 4 for CVE-2017-11110 */
1, sectorSize, newfile) != sectorSize) {
fprintf(stderr, "Error read MSAT!\n");
ole_finish();

19
gnu/packages/patches/curl-bounds-check.patch Normal file
View File

@ -0,0 +1,19 @@
Fix test failure on some 32-bit platforms.
Patch copied from upstream source repository:
https://github.com/curl/curl/commit/45a560390c4356bcb81d933bbbb229c8ea2acb63
diff --git a/src/tool_paramhlp.c b/src/tool_paramhlp.c
index b9dedc989e..85c5e79a7e 100644
--- a/src/tool_paramhlp.c
+++ b/src/tool_paramhlp.c
@@ -218,7 +218,7 @@ static ParameterError str2double(double *val, const char *str, long max)
num = strtod(str, &endptr);
if(errno == ERANGE)
return PARAM_NUMBER_TOO_LARGE;
- if((long)num > max) {
+ if(num > max) {
/* too large */
return PARAM_NUMBER_TOO_LARGE;
}

45
gnu/packages/patches/cvs-2017-12836.patch Normal file
View File

@ -0,0 +1,45 @@
Fix CVE-2017-12836:
http://cve.mitre.org/cgi-bin/cvename.cgi?name=2017-12836
https://security-tracker.debian.org/tracker/CVE-2017-12836
Patch adpated from Debian (comments and changelog annotations removed):
https://anonscm.debian.org/cgit/collab-maint/cvs.git/commit/?h=stretch&id=41e077396e35efb6c879951f44c62dd8a1d0f094
From 41e077396e35efb6c879951f44c62dd8a1d0f094 Mon Sep 17 00:00:00 2001
From: mirabilos <m@mirbsd.org>
Date: Sat, 12 Aug 2017 03:17:18 +0200
Subject: Fix CVE-2017-12836 (Closes: #871810) for stretch
---
debian/changelog | 6 ++++++
src/rsh-client.c | 10 ++++++++--
2 files changed, 14 insertions(+), 2 deletions(-)
diff --git a/src/rsh-client.c b/src/rsh-client.c
index fe0cfc4..1fc860d 100644
--- a/src/rsh-client.c
+++ b/src/rsh-client.c
@@ -105,6 +106,9 @@ start_rsh_server (cvsroot_t *root, struct buffer **to_server_p,
rsh_argv[i++] = argvport;
}
+ /* Only non-option arguments from here. (CVE-2017-12836) */
+ rsh_argv[i++] = "--";
+
rsh_argv[i++] = root->hostname;
rsh_argv[i++] = cvs_server;
if (readonlyfs)
@@ -189,6 +193,8 @@ start_rsh_server (cvsroot_t *root, struct buffer **to_server_p,
*p++ = argvport;
}
+ *p++ = "--";
+
*p++ = root->hostname;
*p++ = command;
*p++ = NULL;
--
cgit v0.12

46
gnu/packages/patches/e2fsprogs-32bit-quota-warnings.patch Normal file
View File

@ -0,0 +1,46 @@
Fix a test failure on 32-bit platforms.
Patch copied from upstream source repository:
https://git.kernel.org/pub/scm/fs/ext2/e2fsprogs.git/commit/?id=9e31a5696c4b699bf000a07b86601c1fb91c0493
diff --git a/lib/support/mkquota.c b/lib/support/mkquota.c
index 00f3a40..931a839 100644
--- a/lib/support/mkquota.c
+++ b/lib/support/mkquota.c
@@ -50,11 +50,13 @@ static void print_dquot(const char *desc, struct dquot *dq)
{
if (desc)
fprintf(stderr, "%s: ", desc);
- fprintf(stderr, "%u %ld:%ld:%ld %ld:%ld:%ld\n",
- dq->dq_id, dq->dq_dqb.dqb_curspace,
- dq->dq_dqb.dqb_bsoftlimit, dq->dq_dqb.dqb_bhardlimit,
- dq->dq_dqb.dqb_curinodes,
- dq->dq_dqb.dqb_isoftlimit, dq->dq_dqb.dqb_ihardlimit);
+ fprintf(stderr, "%u %lld:%lld:%lld %lld:%lld:%lld\n",
+ dq->dq_id, (long long) dq->dq_dqb.dqb_curspace,
+ (long long) dq->dq_dqb.dqb_bsoftlimit,
+ (long long) dq->dq_dqb.dqb_bhardlimit,
+ (long long) dq->dq_dqb.dqb_curinodes,
+ (long long) dq->dq_dqb.dqb_isoftlimit,
+ (long long) dq->dq_dqb.dqb_ihardlimit);
}
#else
static void print_dquot(const char *desc EXT2FS_ATTR((unused)),
@@ -524,11 +526,11 @@ static int scan_dquots_callback(struct dquot *dquot, void *cb_data)
dq->dq_dqb.dqb_curinodes != dquot->dq_dqb.dqb_curinodes) {
scan_data->usage_is_inconsistent = 1;
fprintf(stderr, "[QUOTA WARNING] Usage inconsistent for ID %u:"
- "actual (%ld, %ld) != expected (%ld, %ld)\n",
- dq->dq_id, dq->dq_dqb.dqb_curspace,
- dq->dq_dqb.dqb_curinodes,
- dquot->dq_dqb.dqb_curspace,
- dquot->dq_dqb.dqb_curinodes);
+ "actual (%lld, %lld) != expected (%lld, %lld)\n",
+ dq->dq_id, (long long) dq->dq_dqb.dqb_curspace,
+ (long long) dq->dq_dqb.dqb_curinodes,
+ (long long) dquot->dq_dqb.dqb_curspace,
+ (long long) dquot->dq_dqb.dqb_curinodes);
}
if (scan_data->update_limits) {

27
gnu/packages/patches/qemu-CVE-2017-10664.patch Normal file
View File

@ -0,0 +1,27 @@
Fix CVE-2017-10664:
https://lists.gnu.org/archive/html/qemu-devel/2017-06/msg02693.html
https://bugzilla.redhat.com/show_bug.cgi?id=1466190
https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-10664
https://security-tracker.debian.org/tracker/CVE-2017-10664
Patch copied from upstream source repository:
https://git.qemu.org/gitweb.cgi?p=qemu.git;a=commitdiff;h=041e32b8d9d076980b4e35317c0339e57ab888f1
diff --git a/qemu-nbd.c b/qemu-nbd.c
index 9464a0461c..4dd3fd4732 100644
--- a/qemu-nbd.c
+++ b/qemu-nbd.c
@@ -581,6 +581,10 @@ int main(int argc, char **argv)
sa_sigterm.sa_handler = termsig_handler;
sigaction(SIGTERM, &sa_sigterm, NULL);
+#ifdef CONFIG_POSIX
+ signal(SIGPIPE, SIG_IGN);
+#endif
+
module_call_init(MODULE_INIT_TRACE);
qcrypto_init(&error_fatal);

38
gnu/packages/patches/qemu-CVE-2017-10806.patch Normal file
View File

@ -0,0 +1,38 @@
Fix CVE-2017-10806:
https://lists.nongnu.org/archive/html/qemu-devel/2017-05/msg03087.html
https://bugzilla.redhat.com/show_bug.cgi?id=1468496
https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-10806
https://security-tracker.debian.org/tracker/CVE-2017-10806
Patch copied from upstream source repository:
https://git.qemu.org/gitweb.cgi?p=qemu.git;a=commit;h=bd4a683505b27adc1ac809f71e918e58573d851d
diff --git a/hw/usb/redirect.c b/hw/usb/redirect.c
index b001a27f05..ad5ef783a6 100644
--- a/hw/usb/redirect.c
+++ b/hw/usb/redirect.c
@@ -229,21 +229,10 @@ static void usbredir_log(void *priv, int level, const char *msg)
static void usbredir_log_data(USBRedirDevice *dev, const char *desc,
const uint8_t *data, int len)
{
- int i, j, n;
-
if (dev->debug < usbredirparser_debug_data) {
return;
}
-
- for (i = 0; i < len; i += j) {
- char buf[128];
-
- n = sprintf(buf, "%s", desc);
- for (j = 0; j < 8 && i + j < len; j++) {
- n += sprintf(buf + n, " %02X", data[i + j]);
- }
- error_report("%s", buf);
- }
+ qemu_hexdump((char *)data, stderr, desc, len);
}
/*

106
gnu/packages/patches/qemu-CVE-2017-10911.patch Normal file
View File

@ -0,0 +1,106 @@
Fix CVE-2017-10911:
https://xenbits.xen.org/xsa/advisory-216.html
https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-10911
https://security-tracker.debian.org/tracker/CVE-2017-10911
Patch copied from Xen Security Advisory:
https://xenbits.xen.org/xsa/xsa216-qemuu.patch
--- a/hw/block/xen_blkif.h
+++ b/hw/block/xen_blkif.h
@@ -14,9 +14,6 @@
struct blkif_common_request {
char dummy;
};
-struct blkif_common_response {
- char dummy;
-};
/* i386 protocol version */
#pragma pack(push, 4)
@@ -36,13 +33,7 @@ struct blkif_x86_32_request_discard {
blkif_sector_t sector_number; /* start sector idx on disk (r/w only) */
uint64_t nr_sectors; /* # of contiguous sectors to discard */
};
-struct blkif_x86_32_response {
- uint64_t id; /* copied from request */
- uint8_t operation; /* copied from request */
- int16_t status; /* BLKIF_RSP_??? */
-};
typedef struct blkif_x86_32_request blkif_x86_32_request_t;
-typedef struct blkif_x86_32_response blkif_x86_32_response_t;
#pragma pack(pop)
/* x86_64 protocol version */
@@ -62,20 +53,14 @@ struct blkif_x86_64_request_discard {
blkif_sector_t sector_number; /* start sector idx on disk (r/w only) */
uint64_t nr_sectors; /* # of contiguous sectors to discard */
};
-struct blkif_x86_64_response {
- uint64_t __attribute__((__aligned__(8))) id;
- uint8_t operation; /* copied from request */
- int16_t status; /* BLKIF_RSP_??? */
-};
typedef struct blkif_x86_64_request blkif_x86_64_request_t;
-typedef struct blkif_x86_64_response blkif_x86_64_response_t;
DEFINE_RING_TYPES(blkif_common, struct blkif_common_request,
- struct blkif_common_response);
+ struct blkif_response);
DEFINE_RING_TYPES(blkif_x86_32, struct blkif_x86_32_request,
- struct blkif_x86_32_response);
+ struct blkif_response QEMU_PACKED);
DEFINE_RING_TYPES(blkif_x86_64, struct blkif_x86_64_request,
- struct blkif_x86_64_response);
+ struct blkif_response);
union blkif_back_rings {
blkif_back_ring_t native;
--- a/hw/block/xen_disk.c
+++ b/hw/block/xen_disk.c
@@ -769,31 +769,30 @@ static int blk_send_response_one(struct
struct XenBlkDev *blkdev = ioreq->blkdev;
int send_notify = 0;
int have_requests = 0;
- blkif_response_t resp;
- void *dst;
-
- resp.id = ioreq->req.id;
- resp.operation = ioreq->req.operation;
- resp.status = ioreq->status;
+ blkif_response_t *resp;
/* Place on the response ring for the relevant domain. */
switch (blkdev->protocol) {
case BLKIF_PROTOCOL_NATIVE:
- dst = RING_GET_RESPONSE(&blkdev->rings.native, blkdev->rings.native.rsp_prod_pvt);
+ resp = RING_GET_RESPONSE(&blkdev->rings.native,
+ blkdev->rings.native.rsp_prod_pvt);
break;
case BLKIF_PROTOCOL_X86_32:
- dst = RING_GET_RESPONSE(&blkdev->rings.x86_32_part,
- blkdev->rings.x86_32_part.rsp_prod_pvt);
+ resp = RING_GET_RESPONSE(&blkdev->rings.x86_32_part,
+ blkdev->rings.x86_32_part.rsp_prod_pvt);
break;
case BLKIF_PROTOCOL_X86_64:
- dst = RING_GET_RESPONSE(&blkdev->rings.x86_64_part,
- blkdev->rings.x86_64_part.rsp_prod_pvt);
+ resp = RING_GET_RESPONSE(&blkdev->rings.x86_64_part,
+ blkdev->rings.x86_64_part.rsp_prod_pvt);
break;
default:
- dst = NULL;
return 0;
}
- memcpy(dst, &resp, sizeof(resp));
+
+ resp->id = ioreq->req.id;
+ resp->operation = ioreq->req.operation;
+ resp->status = ioreq->status;
+
blkdev->rings.common.rsp_prod_pvt++;
RING_PUSH_RESPONSES_AND_CHECK_NOTIFY(&blkdev->rings.common, send_notify);

25
gnu/packages/patches/qemu-CVE-2017-11434.patch Normal file
View File

@ -0,0 +1,25 @@
Fix CVE-2017-11434:
https://lists.gnu.org/archive/html/qemu-devel/2017-07/msg05001.html
https://bugzilla.redhat.com/show_bug.cgi?id=1472611
https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-11434
https://security-tracker.debian.org/tracker/CVE-2017-11434
Patch copied from upstream source repository:
https://git.qemu.org/gitweb.cgi?p=qemu.git;a=commit;h=413d463f43fbc4dd3a601e80a5724aa384a265a0
diff --git a/slirp/bootp.c b/slirp/bootp.c
index 5a4646c182..5dd1a415b5 100644
--- a/slirp/bootp.c
+++ b/slirp/bootp.c
@@ -123,6 +123,9 @@ static void dhcp_decode(const struct bootp_t *bp, int *pmsg_type,
if (p >= p_end)
break;
len = *p++;
+ if (p + len > p_end) {
+ break;
+ }
DPRINTF("dhcp: tag=%d len=%d\n", tag, len);
switch(tag) {

130
gnu/packages/perl.scm
View File

@ -1,7 +1,7 @@
;;; GNU Guix --- Functional package management for GNU ;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2013 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2013 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2015, 2016 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2015, 2016, 2017 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015, 2016 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2015, 2016 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr> ;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr>
;;; Copyright © 2016 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2016 Mark H Weaver <mhw@netris.org>
@ -3419,6 +3419,30 @@ objects, which execute a given code block when destroyed, and scoped guards,
which are tied to the scope exit.") which are tied to the scope exit.")
(license (package-license perl)))) (license (package-license perl))))
(define-public perl-hash-fieldhash
(package
(name "perl-hash-fieldhash")
(version "0.15")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/G/GF/GFUJI/"
"Hash-FieldHash-" version ".tar.gz"))
(sha256
(base32
"1wg8nzczfxif55j2nbymbhyd25pjy7dqs4bvd6jrcds3ll3mflaw"))))
(build-system perl-build-system)
(native-inputs
`(("perl-module-build" ,perl-module-build)
("perl-test-leaktrace" ,perl-test-leaktrace)))
(home-page "http://search.cpan.org/dist/Hash-FieldHash")
(synopsis "Lightweight field hash for inside-out objects")
(description "@code{Hash::FieldHash} provides the field hash mechanism
which supports the inside-out technique. It is an alternative to
@code{Hash::Util::FieldHash} with a simpler interface, higher performance, and
relic support.")
(license (package-license perl))))
(define-public perl-hash-merge (define-public perl-hash-merge
(package (package
(name "perl-hash-merge") (name "perl-hash-merge")
@ -5742,6 +5766,27 @@ can also be useful as a development and debugging tool for catching updates to
variables that should not be changed.") variables that should not be changed.")
(license (package-license perl)))) (license (package-license perl))))
(define-public perl-ref-util-xs
(package
(name "perl-ref-util-xs")
(version "0.116")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/X/XS/XSAWYERX/"
"Ref-Util-XS-" version ".tar.gz"))
(sha256
(base32
"0l5dzbd71iclv8fdjk7685rq6pbfiiydh0n70br6g9l9iy2smr6f"))))
(build-system perl-build-system)
(home-page "http://search.cpan.org/dist/Ref-Util-XS")
(synopsis "XS implementation for Ref::Util")
(description "@code{Ref::Util::XS} is the XS implementation of
@code{Ref::Util}, which provides several functions to help identify references
in a more convenient way than the usual approach of examining the return value
of @code{ref}.")
(license x11)))
(define-public perl-regexp-common (define-public perl-regexp-common
(package (package
(name "perl-regexp-common") (name "perl-regexp-common")
@ -5767,6 +5812,27 @@ codes.")
;; Quad-licensed: Perl Artistic, Perl Artistic 2.0, X11, and BSD. ;; Quad-licensed: Perl Artistic, Perl Artistic 2.0, X11, and BSD.
(license (list (package-license perl) x11 bsd-3)))) (license (list (package-license perl) x11 bsd-3))))
(define-public perl-regexp-util
(package
(name "perl-regexp-util")
(version "0.003")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/T/TO/TOBYINK/"
"Regexp-Util-" version ".tar.gz"))
(sha256
(base32
"01n1cggiflsnp9f6adkcxzkc0qpgssz60cwnyyd8mzavh2ximr5a"))))
(build-system perl-build-system)
(home-page "http://search.cpan.org/dist/Regexp-Util")
(synopsis "Selection of general-utility regexp subroutines")
(description "This package provides a selection of regular expression
subroutines including @code{is_regexp}, @code{regexp_seen_evals},
@code{regexp_is_foreign}, @code{regexp_is_anchored}, @code{serialize_regexp},
and @code{deserialize_regexp}.")
(license (package-license perl))))
(define-public perl-role-tiny (define-public perl-role-tiny
(package (package
(name "perl-role-tiny") (name "perl-role-tiny")
@ -7955,6 +8021,68 @@ that are designed to minimize common mistakes with eval blocks, and nothing
else.") else.")
(license x11))) (license x11)))
(define-public perl-type-tie
(package
(name "perl-type-tie")
(version "0.009")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/T/TO/TOBYINK/"
"Type-Tie-" version ".tar.gz"))
(sha256
(base32
"1wv32kd7gx4kfyvzs13y029f49qbbji991wawvarac7rlz09wpan"))))
(build-system perl-build-system)
(native-inputs
`(("perl-test-fatal" ,perl-test-fatal)
("perl-test-requires" ,perl-test-requires)))
(propagated-inputs
`(("perl-exporter-tiny" ,perl-exporter-tiny)
("perl-hash-fieldhash" ,perl-hash-fieldhash)))
(home-page "http://search.cpan.org/dist/Type-Tie")
(synopsis "Tie a variable to a type constraint")
(description "This module exports a single function: @code{ttie}. It ties
a variable to a type constraint, ensuring that whatever values stored in the
variable will conform to the type constraint. If the type constraint has
coercions, these will be used if necessary to ensure values assigned to the
variable conform.")
(license (package-license perl))))
(define-public perl-type-tiny
(package
(name "perl-type-tiny")
(version "1.002001")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/T/TO/TOBYINK/"
"Type-Tiny-" version ".tar.gz"))
(sha256
(base32
"1p8krim8kvw123nady96fagi8sk2pj1z8jkr4r8n45ihyamfxjck"))))
(build-system perl-build-system)
(native-inputs
`(("perl-test-warnings" ,perl-test-warnings)))
(propagated-inputs
`(("perl-devel-lexalias" ,perl-devel-lexalias)
("perl-devel-stacktrace" ,perl-devel-stacktrace)
("perl-exporter-tiny" ,perl-exporter-tiny)
("perl-moo" ,perl-moo)
("perl-moose" ,perl-moose)
("perl-mouse" ,perl-mouse)
("perl-ref-util-xs" ,perl-ref-util-xs)
("perl-regexp-util" ,perl-regexp-util)
("perl-type-tie" ,perl-type-tie)))
(home-page "http://search.cpan.org/dist/Type-Tiny")
(synopsis "Tiny, yet Moo(se)-compatible type constraint")
(description "@code{Type::Tiny} is a small class for writing type
constraints, inspired by Moose's type constraint API. It has only one
non-core dependency (and even that is simply a module that was previously
distributed as part of @code{Type::Tiny} but has since been spun off), and can
be used with Moose, Mouse and Moo (or none of the above).")
(license (package-license perl))))
(define-public perl-types-serialiser (define-public perl-types-serialiser
(package (package
(name "perl-types-serialiser") (name "perl-types-serialiser")

4
gnu/packages/python.scm
View File

@ -14324,10 +14324,12 @@ Pylint has many rules enabled by default, way too much to silence them
all on a minimally sized program. It's highly configurable and handle all on a minimally sized program. It's highly configurable and handle
pragmas to control it from within your code. Additionally, it is pragmas to control it from within your code. Additionally, it is
possible to write plugins to add your own checks.") possible to write plugins to add your own checks.")
(properties `((python2-variant . ,(delay python2-pylint))))
(license license:gpl2+))) (license license:gpl2+)))
(define-public python2-pylint (define-public python2-pylint
(let ((pylint (package-with-python2 python-pylint))) (let ((pylint (package-with-python2
(strip-python2-variant python-pylint))))
(package (inherit pylint) (package (inherit pylint)
(propagated-inputs (propagated-inputs
`(("python2-backports-functools-lru-cache" `(("python2-backports-functools-lru-cache"

69
gnu/packages/shells.scm
View File

@ -449,38 +449,41 @@ operating system.")
(license bsd-3)))) (license bsd-3))))
(define-public linenoise (define-public linenoise
(package (let ((commit "2105ce445821381cf1bca87b6d386d4ea88ee20d")
(name "linenoise") (revision "1"))
(version "1.0") (package
(source (name "linenoise")
(origin (version (string-append "1.0-" revision "." (string-take commit 7)))
(method url-fetch) (source
(uri (string-append "https://github.com/antirez/linenoise/" (origin
"archive/" version ".tar.gz")) (method git-fetch)
(file-name (string-append name "-" version ".tar.gz")) (uri (git-reference
(sha256 (url "https://github.com/antirez/linenoise")
(base32 (commit commit)))
"05006hd56xcvxjdpll4x720bpfan7vwqmxbw8a2kvm10w57ll1gm")))) (file-name (string-append name "-" version "-checkout"))
(build-system gnu-build-system) (sha256
(arguments (base32
`(#:tests? #f ;No tests are included "1z16qwix8z6a40fskdgxsibkqgdrp4q6ncp4n6hnv4r9iihy2d8r"))))
#:make-flags (list "CC=gcc") (build-system gnu-build-system)
#:phases (arguments
(modify-phases %standard-phases `(#:tests? #f ;No tests are included
(delete 'configure) #:make-flags (list "CC=gcc")
(replace 'install #:phases
(lambda* (#:key outputs #:allow-other-keys) (modify-phases %standard-phases
;; At the moment there is no 'make install' in upstream. (delete 'configure)
(let* ((out (assoc-ref outputs "out"))) (replace 'install
(install-file "linenoise.h" (lambda* (#:key outputs #:allow-other-keys)
(string-append out "/include/linenoise")) ;; At the moment there is no 'make install' in upstream.
(install-file "linenoise.c" (let* ((out (assoc-ref outputs "out")))
(string-append out "/include/linenoise")) (install-file "linenoise.h"
#t)))))) (string-append out "/include/linenoise"))
(home-page "https://github.com/antirez/linenoise") (install-file "linenoise.c"
(synopsis "Minimal zero-config readline replacement") (string-append out "/include/linenoise"))
(description #t))))))
"Linenoise is a minimal, zero-config, readline replacement. (home-page "https://github.com/antirez/linenoise")
(synopsis "Minimal zero-config readline replacement")
(description
"Linenoise is a minimal, zero-config, readline replacement.
Its features include: Its features include:
@enumerate @enumerate
@ -490,7 +493,7 @@ Its features include:
@item Hints (suggestions at the right of the prompt as you type) @item Hints (suggestions at the right of the prompt as you type)
@item A subset of VT100 escapes, ANSI.SYS compatible @item A subset of VT100 escapes, ANSI.SYS compatible
@end enumerate\n") @end enumerate\n")
(license bsd-2))) (license bsd-2))))
(define-public s-shell (define-public s-shell
(let ((commit "6604341edb3a775ff94415762af3ee9bd86bfb3c") (let ((commit "6604341edb3a775ff94415762af3ee9bd86bfb3c")

2
gnu/packages/textutils.scm
View File

@ -12,6 +12,7 @@
;;; Copyright © 2017 Rene Saavedra <rennes@openmailbox.org> ;;; Copyright © 2017 Rene Saavedra <rennes@openmailbox.org>
;;; Copyright © 2017 Hartmut Goebel <h.goebel@crazy-compilers.com> ;;; Copyright © 2017 Hartmut Goebel <h.goebel@crazy-compilers.com>
;;; Copyright © 2017 Kei Kebreau <kei@openmailbox.org> ;;; Copyright © 2017 Kei Kebreau <kei@openmailbox.org>
;;; Copyright © 2017 Alex Vong <alexvong1995@gmail.com>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -409,6 +410,7 @@ runs Word\".")
(method url-fetch) (method url-fetch)
(uri (string-append "http://ftp.wagner.pp.ru/pub/catdoc/" (uri (string-append "http://ftp.wagner.pp.ru/pub/catdoc/"
"catdoc-" version ".tar.gz")) "catdoc-" version ".tar.gz"))
(patches (search-patches "catdoc-CVE-2017-11110.patch"))
(sha256 (sha256
(base32 (base32
"15h7v3bmwfk4z8r78xs5ih6vd0pskn0rj90xghvbzdjj0cc88jji")))) "15h7v3bmwfk4z8r78xs5ih6vd0pskn0rj90xghvbzdjj0cc88jji"))))

22
gnu/packages/version-control.scm
View File

@ -350,18 +350,21 @@ everything from small to very large projects with speed and efficiency.")
(home-page "https://git-scm.com/"))) (home-page "https://git-scm.com/")))
;; Some dependent packages directly access internal interfaces which ;; Some dependent packages directly access internal interfaces which
;; have changed in 2.12 ;; have changed in 2.12. TODO: Remove this for cgit > 1.1.
(define-public git@2.10 (define-public git@2.10
(package (package
(inherit git) (inherit git)
(version "2.10.3") (version "2.10.4")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "mirror://kernel.org/software/scm/git/git-" (uri (string-append "mirror://kernel.org/software/scm/git/git-"
version ".tar.xz")) version ".tar.xz"))
(sha256 (sha256
(base32 (base32
"02mb7yi49algsya3hnkcxdslwb6p1bi7c732z1g8kzq4hs838m7z")))))) "1pni4mgih5w42813dxljl61s7xmcpdnar34d9m4548hzpljjyd4l"))))
(arguments
`(#:tests? #f
,@(package-arguments git)))))
(define-public libgit2 (define-public libgit2
(package (package
@ -921,6 +924,7 @@ machine.")
(uri (string-append (uri (string-append
"https://ftp.gnu.org/non-gnu/cvs/source/feature/" "https://ftp.gnu.org/non-gnu/cvs/source/feature/"
version "/cvs-" version ".tar.bz2")) version "/cvs-" version ".tar.bz2"))
(patches (search-patches "cvs-2017-12836.patch"))
(sha256 (sha256
(base32 (base32
"0pjir8cwn0087mxszzbsi1gyfc6373vif96cw4q3m1x6p49kd1bq")))) "0pjir8cwn0087mxszzbsi1gyfc6373vif96cw4q3m1x6p49kd1bq"))))

4
gnu/packages/video.scm
View File

@ -1121,7 +1121,7 @@ access to mpv's powerful playback capabilities.")
(define-public youtube-dl (define-public youtube-dl
(package (package
(name "youtube-dl") (name "youtube-dl")
(version "2017.08.06") (version "2017.08.13")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://yt-dl.org/downloads/" (uri (string-append "https://yt-dl.org/downloads/"
@ -1129,7 +1129,7 @@ access to mpv's powerful playback capabilities.")
version ".tar.gz")) version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"1vdfda2w1ckhqna8xcpphr5l0rp9zhs368lic4f7144rxvbydiwm")))) "1parn0xda7mp1phcj19axldifgh6mcwia6wdi3m20kidc9m4wb11"))))
(build-system python-build-system) (build-system python-build-system)
(arguments (arguments
;; The problem here is that the directory for the man page and completion ;; The problem here is that the directory for the man page and completion

7
gnu/packages/virtualization.scm
View File

@ -3,6 +3,7 @@
;;; Copyright © 2015, 2016, 2017 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2015, 2016, 2017 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017 Alex Vong <alexvong1995@gmail.com>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -82,7 +83,11 @@
"qemu-CVE-2017-8379.patch" "qemu-CVE-2017-8379.patch"
"qemu-CVE-2017-8380.patch" "qemu-CVE-2017-8380.patch"
"qemu-CVE-2017-9524.patch" "qemu-CVE-2017-9524.patch"
"qemu-CVE-2017-11334.patch")) "qemu-CVE-2017-10664.patch"
"qemu-CVE-2017-10806.patch"
"qemu-CVE-2017-10911.patch"
"qemu-CVE-2017-11334.patch"
"qemu-CVE-2017-11434.patch"))
(sha256 (sha256
(base32 (base32
"08mhfs0ndbkyqgw7fjaa9vjxf4dinrly656f6hjzvmaz7hzc677h")))) "08mhfs0ndbkyqgw7fjaa9vjxf4dinrly656f6hjzvmaz7hzc677h"))))

8
gnu/packages/xdisorg.scm
View File

@ -93,6 +93,14 @@
(build-system python-build-system) (build-system python-build-system)
(arguments (arguments
`(#:python ,python-2 ;incompatible with python 3 `(#:python ,python-2 ;incompatible with python 3
#:phases
(modify-phases %standard-phases
(add-before 'build 'configure
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "screenlayout/xrandr.py"
(("\"xrandr\"") (string-append "\"" (assoc-ref inputs "xrandr")
"/bin/xrandr\"")))
#t)))
#:tests? #f)) ;no tests #:tests? #f)) ;no tests
(inputs `(("pygtk" ,python2-pygtk) (inputs `(("pygtk" ,python2-pygtk)
("xrandr" ,xrandr))) ("xrandr" ,xrandr)))

86
gnu/services/audio.scm Normal file
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@ -0,0 +1,86 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2017 Peter Mikkelsen <petermikkelsen10@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu services audio)
#:use-module (guix gexp)
#:use-module (gnu services)
#:use-module (gnu services shepherd)
#:use-module (gnu packages mpd)
#:use-module (guix records)
#:use-module (ice-9 match)
#:export (mpd-configuration
mpd-configuration?
mpd-service-type))
;;; Commentary:
;;;
;;; Audio related services
;;;
;;; Code:
(define-record-type* <mpd-configuration>
mpd-configuration make-mpd-configuration
mpd-configuration?
(user mpd-configuration-user
(default "mpd"))
(music-dir mpd-configuration-music-dir
(default "~/Music"))
(playlist-dir mpd-configuration-playlist-dir
(default "~/.mpd/playlists"))
(port mpd-configuration-port
(default "6600"))
(address mpd-configuration-address
(default "any"))
(pid-file mpd-configuration-pid-file
(default "/var/run/mpd.pid")))
(define (mpd-config->file config)
(apply
mixed-text-file "mpd.conf"
"audio_output {\n"
" type \"pulse\"\n"
" name \"MPD\"\n"
"}\n"
(map (match-lambda
((config-name config-val)
(string-append config-name " \"" (config-val config) "\"\n")))
`(("user" ,mpd-configuration-user)
("music_directory" ,mpd-configuration-music-dir)
("playlist_directory" ,mpd-configuration-playlist-dir)
("port" ,mpd-configuration-port)
("bind_to_address" ,mpd-configuration-address)
("pid_file" ,mpd-configuration-pid-file)))))
(define (mpd-service config)
(shepherd-service
(documentation "Run the MPD (Music Player Daemon)")
(provision '(mpd))
(start #~(make-forkexec-constructor
(list #$(file-append mpd "/bin/mpd")
"--no-daemon"
#$(mpd-config->file config))
#:pid-file #$(mpd-configuration-pid-file config)))
(stop #~(make-kill-destructor))))
(define mpd-service-type
(service-type
(name 'mpd)
(extensions
(list (service-extension shepherd-root-service-type
(compose list mpd-service))))
(default-value (mpd-configuration))))

78
gnu/tests/audio.scm Normal file
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@ -0,0 +1,78 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2017 Peter Mikkelsen <petermikkelsen10@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu tests audio)
#:use-module (gnu tests)
#:use-module (gnu system)
#:use-module (gnu system vm)
#:use-module (gnu services)
#:use-module (gnu services audio)
#:use-module (gnu packages mpd)
#:use-module (guix gexp)
#:export (%test-mpd))
(define %mpd-os
(simple-operating-system
(service mpd-service-type
(mpd-configuration
(user "root")))))
(define (run-mpd-test)
"Run tests in %mpd-os, which has mpd running."
(define os
(marionette-operating-system
%mpd-os
#:imported-modules '((gnu services herd))))
(define vm
(virtual-machine os))
(define test
(with-imported-modules '((gnu build marionette))
#~(begin
(use-modules (srfi srfi-64)
(gnu build marionette))
(define marionette
(make-marionette (list #$vm)))
(mkdir #$output)
(chdir #$output)
(test-begin "mpd")
(test-assert "service is running"
(marionette-eval
'(begin
(use-modules (gnu services herd))
(start-service 'mpd))
marionette))
(test-assert "mpc connect"
(marionette-eval
'(zero? (system #$(file-append mpd-mpc "/bin/mpc")))
marionette))
(test-end)
(exit (= (test-runner-fail-count (test-runner-current)) 0)))))
(gexp->derivation "mpd-test" test))
(define %test-mpd
(system-test
(name "mpd")
(description "Test that the mpd can run and be connected to.")
(value (run-mpd-test))))