gnu: Add ocaml-mcl.
* gnu/packages/machine-learning.scm (ocaml-mcl): New variable.
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@ -26,6 +26,7 @@
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#:use-module (guix svn-download)
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#:use-module (guix build-system cmake)
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#:use-module (guix build-system gnu)
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#:use-module (guix build-system ocaml)
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#:use-module (guix build-system r)
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#:use-module (gnu packages)
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#:use-module (gnu packages autotools)
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@ -35,6 +36,7 @@
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#:use-module (gnu packages gcc)
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#:use-module (gnu packages image)
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#:use-module (gnu packages maths)
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#:use-module (gnu packages ocaml)
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#:use-module (gnu packages perl)
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#:use-module (gnu packages pkg-config)
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#:use-module (gnu packages python)
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@ -239,6 +241,39 @@ networks) based on simulation of (stochastic) flow in graphs.")
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;; http://listserver.ebi.ac.uk/pipermail/mcl-users/2016/000376.html
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(license license:gpl3)))
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(define-public ocaml-mcl
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(package
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(name "ocaml-mcl")
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(version "12-068oasis4")
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(source
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(origin
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(method url-fetch)
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(uri (string-append
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"https://github.com/fhcrc/mcl/archive/"
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version ".tar.gz"))
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(file-name (string-append name "-" version ".tar.gz"))
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(sha256
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(base32
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"1l5jbhwjpsj38x8b9698hfpkv75h8hn3kj0gihjhn8ym2cwwv110"))))
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(build-system ocaml-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(add-before 'configure 'patch-paths
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(lambda _
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(substitute* "configure"
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(("SHELL = /bin/sh") (string-append "SHELL = "(which "sh"))))
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(substitute* "setup.ml"
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(("LDFLAGS=-fPIC")
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(string-append "LDFLAGS=-fPIC\"; \"SHELL=" (which "sh"))))
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#t)))))
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(home-page "https://github.com/fhcrc/mcl")
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(synopsis "OCaml wrappers around MCL")
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(description
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"This package provides OCaml bindings for the MCL graph clustering
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algorithm.")
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(license license:gpl3)))
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(define-public randomjungle
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(package
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(name "randomjungle")
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