gnu: Update more dead Google Code home pages.
* gnu/packages/bioinformatics.scm (cutadapt, mosaik, pepr)[home-page]: Update to their respective replacements.
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@ -1832,7 +1832,7 @@ preparation protocols.")
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(native-inputs
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(native-inputs
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`(("python-cython" ,python-cython)
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`(("python-cython" ,python-cython)
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("python-nose" ,python-nose)))
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("python-nose" ,python-nose)))
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(home-page "https://code.google.com/p/cutadapt/")
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(home-page "https://cutadapt.readthedocs.io/en/stable/")
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(synopsis "Remove adapter sequences from nucleotide sequencing reads")
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(synopsis "Remove adapter sequences from nucleotide sequencing reads")
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(description
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(description
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"Cutadapt finds and removes adapter sequences, primers, poly-A tails and
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"Cutadapt finds and removes adapter sequences, primers, poly-A tails and
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@ -4263,7 +4263,7 @@ viewer.")
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`(("perl" ,perl)
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`(("perl" ,perl)
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("zlib" ,zlib)))
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("zlib" ,zlib)))
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(supported-systems '("x86_64-linux"))
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(supported-systems '("x86_64-linux"))
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(home-page "https://code.google.com/p/mosaik-aligner/")
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(home-page "https://github.com/wanpinglee/MOSAIK")
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(synopsis "Map nucleotide sequence reads to reference genomes")
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(synopsis "Map nucleotide sequence reads to reference genomes")
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(description
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(description
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"MOSAIK is a program for mapping second and third-generation sequencing
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"MOSAIK is a program for mapping second and third-generation sequencing
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@ -7807,7 +7807,7 @@ may optionally be provided to further inform the peak-calling process.")
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`(("python2-numpy" ,python2-numpy)
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`(("python2-numpy" ,python2-numpy)
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("python2-scipy" ,python2-scipy)
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("python2-scipy" ,python2-scipy)
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("python2-pysam" ,python2-pysam)))
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("python2-pysam" ,python2-pysam)))
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(home-page "https://code.google.com/p/pepr-chip-seq/")
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(home-page "https://github.com/shawnzhangyx/PePr")
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(synopsis "Peak-calling and prioritization pipeline for ChIP-Seq data")
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(synopsis "Peak-calling and prioritization pipeline for ChIP-Seq data")
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(description
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(description
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"PePr is a ChIP-Seq peak calling or differential binding analysis tool
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"PePr is a ChIP-Seq peak calling or differential binding analysis tool
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