gnu: Add r-msigdbr.
* gnu/packages/cran.scm (r-msigdbr): New variable.
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@ -13066,3 +13066,34 @@ The extrafont package makes both of these things easier.")
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"This package provides the means to plot ggplot2 graphs in the style of
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"This package provides the means to plot ggplot2 graphs in the style of
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the XKCD web comic.")
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the XKCD web comic.")
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(license license:gpl3)))
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(license license:gpl3)))
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(define-public r-msigdbr
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(package
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(name "r-msigdbr")
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(version "6.2.1")
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(source
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(origin
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(method url-fetch)
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(uri (cran-uri "msigdbr" version))
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(sha256
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(base32
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"1264j1hs74kq7hyh68vfynadfi6mdpq46qm1hnwzkzzhmbzpb9cg"))))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-dplyr" ,r-dplyr)
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("r-magrittr" ,r-magrittr)
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("r-rlang" ,r-rlang)
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("r-tibble" ,r-tibble)))
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(home-page "https://github.com/igordot/msigdbr")
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(synopsis "MSigDB gene sets for multiple organisms")
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(description
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"This package provides the @dfn{Molecular Signatures Database} (MSigDB)
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gene sets typically used with the @dfn{Gene Set Enrichment Analysis} (GSEA)
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software in a standard R data frame with key-value pairs. Included are the
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original human gene symbols and Entrez IDs as well as the equivalents for
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various frequently studied model organisms such as mouse, rat, pig, fly, and
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yeast.")
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;; The package is covered under the Expat license, but the upstream MSigDB
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;; files are made available under the Creative Commons Attribution 4.0
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;; International license.
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(license (list license:expat license:cc-by4.0))))
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