gnu: Add python2-pysnptools.

* gnu/packages/python.scm (python2-pysnptools): New variable.
This commit is contained in:
Ricardo Wurmus 2015-06-12 15:46:40 +02:00
parent 74cc67372e
commit 0dde623211
1 changed files with 33 additions and 0 deletions

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@ -2598,6 +2598,39 @@ toolkits.")
(package-propagated-inputs
matplotlib))))))))
(define-public python2-pysnptools
(package
(name "python2-pysnptools")
(version "0.2.13")
(source
(origin
(method url-fetch)
(uri (string-append
"https://pypi.python.org/packages/source/p/pysnptools"
"/pysnptools-" version ".zip"))
(sha256
(base32
"1rzf5qvwfvd2pp84b14pb2gdvxdk5avnj7rb41ac8gndpkr9g6ib"))))
(build-system python-build-system)
(arguments
`(#:python ,python-2)) ; only Python 2.7 is supported
(propagated-inputs
`(("python2-numpy" ,python2-numpy)
("python2-scipy" ,python2-scipy)
("python2-pandas" ,python2-pandas)
("python2-cython" ,python2-cython)))
(native-inputs
`(("unzip" ,unzip)
("python2-setuptools" ,python2-setuptools)))
(home-page "http://research.microsoft.com/en-us/um/redmond/projects/mscompbio/")
(synopsis "Library for reading and manipulating genetic data")
(description
"PySnpTools is a library for reading and manipulating genetic data. It
can, for example, efficiently read whole PLINK *.bed/bim/fam files or parts of
those files. It can also efficiently manipulate ranges of integers using set
operators such as union, intersection, and difference.")
(license asl2.0)))
(define-public python-scipy
(package
(name "python-scipy")