gnu: Add python2-pysnptools.
* gnu/packages/python.scm (python2-pysnptools): New variable.
This commit is contained in:
parent
74cc67372e
commit
0dde623211
|
@ -2598,6 +2598,39 @@ toolkits.")
|
||||||
(package-propagated-inputs
|
(package-propagated-inputs
|
||||||
matplotlib))))))))
|
matplotlib))))))))
|
||||||
|
|
||||||
|
(define-public python2-pysnptools
|
||||||
|
(package
|
||||||
|
(name "python2-pysnptools")
|
||||||
|
(version "0.2.13")
|
||||||
|
(source
|
||||||
|
(origin
|
||||||
|
(method url-fetch)
|
||||||
|
(uri (string-append
|
||||||
|
"https://pypi.python.org/packages/source/p/pysnptools"
|
||||||
|
"/pysnptools-" version ".zip"))
|
||||||
|
(sha256
|
||||||
|
(base32
|
||||||
|
"1rzf5qvwfvd2pp84b14pb2gdvxdk5avnj7rb41ac8gndpkr9g6ib"))))
|
||||||
|
(build-system python-build-system)
|
||||||
|
(arguments
|
||||||
|
`(#:python ,python-2)) ; only Python 2.7 is supported
|
||||||
|
(propagated-inputs
|
||||||
|
`(("python2-numpy" ,python2-numpy)
|
||||||
|
("python2-scipy" ,python2-scipy)
|
||||||
|
("python2-pandas" ,python2-pandas)
|
||||||
|
("python2-cython" ,python2-cython)))
|
||||||
|
(native-inputs
|
||||||
|
`(("unzip" ,unzip)
|
||||||
|
("python2-setuptools" ,python2-setuptools)))
|
||||||
|
(home-page "http://research.microsoft.com/en-us/um/redmond/projects/mscompbio/")
|
||||||
|
(synopsis "Library for reading and manipulating genetic data")
|
||||||
|
(description
|
||||||
|
"PySnpTools is a library for reading and manipulating genetic data. It
|
||||||
|
can, for example, efficiently read whole PLINK *.bed/bim/fam files or parts of
|
||||||
|
those files. It can also efficiently manipulate ranges of integers using set
|
||||||
|
operators such as union, intersection, and difference.")
|
||||||
|
(license asl2.0)))
|
||||||
|
|
||||||
(define-public python-scipy
|
(define-public python-scipy
|
||||||
(package
|
(package
|
||||||
(name "python-scipy")
|
(name "python-scipy")
|
||||||
|
|
Loading…
Reference in New Issue