gnu: Add r-affycoretools.
* gnu/packages/bioconductor.scm (r-affycoretools): New variable.
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@ -1077,6 +1077,45 @@ This package provides some simple approaches to in silico creation of quality
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problems in CEL-level data to help evaluate performance of quality metrics.")
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(license license:artistic2.0)))
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(define-public r-affycoretools
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(package
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(name "r-affycoretools")
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(version "1.56.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "affycoretools" version))
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(sha256
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(base32
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"17dxpzhwwdwnxkdpmyjwdnacg41hw60mlc71w4nzlvs28sfsy09s"))))
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(properties `((upstream-name . "affycoretools")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-affy" ,r-affy)
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("r-annotationdbi" ,r-annotationdbi)
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("r-biobase" ,r-biobase)
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("r-biocgenerics" ,r-biocgenerics)
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("r-dbi" ,r-dbi)
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("r-edger" ,r-edger)
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("r-gcrma" ,r-gcrma)
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("r-ggplot2" ,r-ggplot2)
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("r-gostats" ,r-gostats)
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("r-gplots" ,r-gplots)
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("r-hwriter" ,r-hwriter)
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("r-lattice" ,r-lattice)
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("r-limma" ,r-limma)
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("r-oligoclasses" ,r-oligoclasses)
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("r-reportingtools" ,r-reportingtools)
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("r-rsqlite" ,r-rsqlite)
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("r-s4vectors" ,r-s4vectors)
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("r-xtable" ,r-xtable)))
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(home-page "https://bioconductor.org/packages/affycoretools/")
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(synopsis "Functions for analyses with Affymetrix GeneChips")
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(description
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"This package provides various wrapper functions that have been written
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to streamline the more common analyses that a Biostatistician might see.")
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(license license:artistic2.0)))
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(define-public r-annotate
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(package
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(name "r-annotate")
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