gnu: Add r-flowsom.
* gnu/packages/bioconductor.scm (r-flowsom): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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@ -4904,3 +4904,31 @@ with flow cytometry data.")
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Cytometry data using non-parametric clustering and segmented-regression-based
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Cytometry data using non-parametric clustering and segmented-regression-based
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change point detection.")
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change point detection.")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-flowsom
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(package
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(name "r-flowsom")
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(version "1.16.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "FlowSOM" version))
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(sha256
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(base32
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"03wl3xk7g7vajc4kkrqa0gsbjfxlqr918qi849h5nir31963398l"))))
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(properties `((upstream-name . "FlowSOM")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biocgenerics" ,r-biocgenerics)
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("r-consensusclusterplus" ,r-consensusclusterplus)
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("r-flowcore" ,r-flowcore)
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("r-flowutils" ,r-flowutils)
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("r-igraph" ,r-igraph)
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("r-tsne" ,r-tsne)
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("r-xml" ,r-xml)))
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(home-page "https://bioconductor.org/packages/FlowSOM/")
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(synopsis "Visualize and interpret cytometry data")
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(description
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"FlowSOM offers visualization options for cytometry data, by using
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self-organizing map clustering and minimal spanning trees.")
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(license license:gpl2+)))
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