gnu: Add r-reportingtools.
* gnu/packages/bioconductor.scm (r-reportingtools): New variable.
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@ -1151,6 +1151,54 @@ customizable permutation tests to assess the association between genomic
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region sets and other genomic features.")
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(license license:artistic2.0)))
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(define-public r-reportingtools
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(package
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(name "r-reportingtools")
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(version "2.24.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "ReportingTools" version))
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(sha256
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(base32
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"16ska7mlacka0xi8x2icy8v42vaxccb3a1x73szmfvcrwr592qsc"))))
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(properties
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`((upstream-name . "ReportingTools")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-annotate" ,r-annotate)
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("r-annotationdbi" ,r-annotationdbi)
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("r-biobase" ,r-biobase)
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("r-biocgenerics" ,r-biocgenerics)
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("r-category" ,r-category)
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("r-deseq2" ,r-deseq2)
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("r-edger" ,r-edger)
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("r-ggbio" ,r-ggbio)
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("r-ggplot2" ,r-ggplot2)
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("r-gostats" ,r-gostats)
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("r-gseabase" ,r-gseabase)
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("r-hwriter" ,r-hwriter)
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("r-iranges" ,r-iranges)
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("r-knitr" ,r-knitr)
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("r-lattice" ,r-lattice)
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("r-limma" ,r-limma)
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("r-pfam-db" ,r-pfam-db)
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("r-r-utils" ,r-r-utils)
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("r-xml" ,r-xml)))
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(home-page "https://bioconductor.org/packages/ReportingTools/")
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(synopsis "Tools for making reports in various formats")
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(description
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"The ReportingTools package enables users to easily display reports of
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analysis results generated from sources such as microarray and sequencing
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data. The package allows users to create HTML pages that may be viewed on a
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web browser, or in other formats. Users can generate tables with sortable and
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filterable columns, make and display plots, and link table entries to other
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data sources such as NCBI or larger plots within the HTML page. Using the
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package, users can also produce a table of contents page to link various
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reports together for a particular project that can be viewed in a web
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browser.")
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(license license:artistic2.0)))
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(define-public r-geneplotter
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(package
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(name "r-geneplotter")
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