gnu: Add r-reportingtools.
* gnu/packages/bioconductor.scm (r-reportingtools): New variable.
This commit is contained in:
parent
83b4209122
commit
15184fb386
|
@ -1151,6 +1151,54 @@ customizable permutation tests to assess the association between genomic
|
||||||
region sets and other genomic features.")
|
region sets and other genomic features.")
|
||||||
(license license:artistic2.0)))
|
(license license:artistic2.0)))
|
||||||
|
|
||||||
|
(define-public r-reportingtools
|
||||||
|
(package
|
||||||
|
(name "r-reportingtools")
|
||||||
|
(version "2.24.0")
|
||||||
|
(source
|
||||||
|
(origin
|
||||||
|
(method url-fetch)
|
||||||
|
(uri (bioconductor-uri "ReportingTools" version))
|
||||||
|
(sha256
|
||||||
|
(base32
|
||||||
|
"16ska7mlacka0xi8x2icy8v42vaxccb3a1x73szmfvcrwr592qsc"))))
|
||||||
|
(properties
|
||||||
|
`((upstream-name . "ReportingTools")))
|
||||||
|
(build-system r-build-system)
|
||||||
|
(propagated-inputs
|
||||||
|
`(("r-annotate" ,r-annotate)
|
||||||
|
("r-annotationdbi" ,r-annotationdbi)
|
||||||
|
("r-biobase" ,r-biobase)
|
||||||
|
("r-biocgenerics" ,r-biocgenerics)
|
||||||
|
("r-category" ,r-category)
|
||||||
|
("r-deseq2" ,r-deseq2)
|
||||||
|
("r-edger" ,r-edger)
|
||||||
|
("r-ggbio" ,r-ggbio)
|
||||||
|
("r-ggplot2" ,r-ggplot2)
|
||||||
|
("r-gostats" ,r-gostats)
|
||||||
|
("r-gseabase" ,r-gseabase)
|
||||||
|
("r-hwriter" ,r-hwriter)
|
||||||
|
("r-iranges" ,r-iranges)
|
||||||
|
("r-knitr" ,r-knitr)
|
||||||
|
("r-lattice" ,r-lattice)
|
||||||
|
("r-limma" ,r-limma)
|
||||||
|
("r-pfam-db" ,r-pfam-db)
|
||||||
|
("r-r-utils" ,r-r-utils)
|
||||||
|
("r-xml" ,r-xml)))
|
||||||
|
(home-page "https://bioconductor.org/packages/ReportingTools/")
|
||||||
|
(synopsis "Tools for making reports in various formats")
|
||||||
|
(description
|
||||||
|
"The ReportingTools package enables users to easily display reports of
|
||||||
|
analysis results generated from sources such as microarray and sequencing
|
||||||
|
data. The package allows users to create HTML pages that may be viewed on a
|
||||||
|
web browser, or in other formats. Users can generate tables with sortable and
|
||||||
|
filterable columns, make and display plots, and link table entries to other
|
||||||
|
data sources such as NCBI or larger plots within the HTML page. Using the
|
||||||
|
package, users can also produce a table of contents page to link various
|
||||||
|
reports together for a particular project that can be viewed in a web
|
||||||
|
browser.")
|
||||||
|
(license license:artistic2.0)))
|
||||||
|
|
||||||
(define-public r-geneplotter
|
(define-public r-geneplotter
|
||||||
(package
|
(package
|
||||||
(name "r-geneplotter")
|
(name "r-geneplotter")
|
||||||
|
|
Loading…
Reference in New Issue