gnu: Add bpp-popgen.
* gnu/packages/bioinformatics.scm (bpp-popgen): New variable.
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@ -592,6 +592,39 @@ analysis, phylogenetics, molecular evolution and population genetics. This
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library provides phylogenetics-related modules.")
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(license license:cecill-c))))
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(define-public bpp-popgen
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;; The last release was in 2014 and the recommended way to install from source
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;; is to clone the git repository, so we do this.
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;; http://biopp.univ-montp2.fr/wiki/index.php/Main_Page
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(let ((commit "e472bac9b1a148803895d747cd6d0c5904f85d9f"))
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(package
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(name "bpp-popgen")
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(version (string-append "2.2.0-1." (string-take commit 7)))
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "http://biopp.univ-montp2.fr/git/bpp-popgen")
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(commit commit)))
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(file-name (string-append name "-" version "-checkout"))
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(sha256
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(base32
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"0yn82dzn1n5629nzja68xfrhi655709rjanyryb36vzkmymy6dw5"))))
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(build-system cmake-build-system)
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(arguments
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`(#:parallel-build? #f
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#:tests? #f)) ; There are no tests.
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(inputs
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`(("bpp-core" ,bpp-core)
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("bpp-seq" ,bpp-seq)
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("gcc" ,gcc-5)))
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(home-page "http://biopp.univ-montp2.fr")
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(synopsis "Bio++ population genetics library")
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(description
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"Bio++ is a set of C++ libraries for Bioinformatics, including sequence
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analysis, phylogenetics, molecular evolution and population genetics. This
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library provides population genetics-related modules.")
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(license license:cecill-c))))
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(define-public bpp-seq
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;; The last release was in 2014 and the recommended way to install from source
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;; is to clone the git repository, so we do this.
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