gnu: Add r-erma.

* gnu/packages/bioinformatics.scm (r-erma): New variable.
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Ricardo Wurmus 2017-11-07 15:52:11 +01:00
parent 421c68e3f7
commit 15f98b0d23
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@ -9913,6 +9913,42 @@ on mapping using Entrez Gene identifiers.")
several related annotation packages.") several related annotation packages.")
(license license:artistic2.0))) (license license:artistic2.0)))
(define-public r-erma
(package
(name "r-erma")
(version "0.10.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "erma" version))
(sha256
(base32
"0gcfs9g8vvdv5vmq9b21kd8sq5mizjj49nfzd4in9zvp4b9v7x1g"))))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-foreach" ,r-foreach)
("r-genomicfiles" ,r-genomicfiles)
("r-genomicranges" ,r-genomicranges)
("r-ggplot2" ,r-ggplot2)
("r-homo-sapiens" ,r-homo-sapiens)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)
("r-shiny" ,r-shiny)
("r-summarizedexperiment" ,r-summarizedexperiment)))
(home-page "https://bioconductor.org/packages/erma")
(synopsis "Epigenomic road map adventures")
(description
"The epigenomics road map describes locations of epigenetic marks in DNA
from a variety of cell types. Of interest are locations of histone
modifications, sites of DNA methylation, and regions of accessible chromatin.
This package presents a selection of elements of the road map including
metadata and outputs of the ChromImpute procedure applied to ENCODE cell lines
by Ernst and Kellis.")
(license license:artistic2.0)))
(define-public r-qvalue (define-public r-qvalue
(package (package
(name "r-qvalue") (name "r-qvalue")