gnu: Add r-bsgenome-dmelanogaster-ucsc-dm6.
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm6): New variable.
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@ -29,6 +29,38 @@
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#:use-module (gnu packages statistics)
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#:use-module (gnu packages bioinformatics))
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(define-public r-bsgenome-dmelanogaster-ucsc-dm6
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(package
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(name "r-bsgenome-dmelanogaster-ucsc-dm6")
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(version "1.4.1")
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(source (origin
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(method url-fetch)
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;; We cannot use bioconductor-uri here because this tarball is
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;; located under "data/annotation/" instead of "bioc/".
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(uri (string-append "https://www.bioconductor.org/packages/"
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"release/data/annotation/src/contrib/"
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"BSgenome.Dmelanogaster.UCSC.dm6_"
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version ".tar.gz"))
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(sha256
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(base32
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"1bhj0rdgf7lspw4xby9y9mf7v7jxxz8001bc8vw8kf04rjsx6060"))))
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(properties
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`((upstream-name . "BSgenome.Dmelanogaster.UCSC.dm6")))
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(build-system r-build-system)
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;; As this package provides little more than a very large data file it
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;; doesn't make sense to build substitutes.
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(arguments `(#:substitutable? #f))
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(propagated-inputs
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`(("r-bsgenome" ,r-bsgenome)))
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(home-page
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"https://www.bioconductor.org/packages/BSgenome.Dmelanogaster.UCSC.dm6/")
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(synopsis "Full genome sequences for Fly")
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(description
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"This package provides full genome sequences for Drosophila
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melanogaster (Fly) as provided by UCSC (dm6) and stored in Biostrings
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objects.")
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(license license:artistic2.0)))
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(define-public r-hpar
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(package
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(name "r-hpar")
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