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gnu: r-gwascat: Update to 2.16.0. 

* gnu/packages/bioinformatics.scm (r-gwascat): Update to 2.16.0.
[propagated-inputs]: Remove r-annotationhub, r-ggbio, r-ggplot2, r-gqtlstats,
r-graph, r-gviz, r-snpstats, r-summarizedexperiment, and r-variantannotation.
master
Ricardo Wurmus 2019-05-05 23:46:28 +02:00
parent 256609eb46
commit 1b454f9f69
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1 changed files with 3 additions and 12 deletions
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@ -10302,36 +10302,27 @@ with your data.")
(define-public r-gwascat (define-public r-gwascat
(package (package
(name "r-gwascat") (name "r-gwascat")
(version "2.14.0") (version "2.16.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "gwascat" version)) (uri (bioconductor-uri "gwascat" version))
(sha256 (sha256
(base32 (base32
"1fnyjydhicq4ayrv0lqjv48h9bd72h40s6l82g1h2ng0icwz38g0")))) "0akb36mrybmxbb1bc9kgxbnj3cdypfylj3yzrmhjwqxml03mg61i"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi) `(("r-annotationdbi" ,r-annotationdbi)
("r-annotationhub" ,r-annotationhub)
("r-biocgenerics" ,r-biocgenerics) ("r-biocgenerics" ,r-biocgenerics)
("r-biostrings" ,r-biostrings) ("r-biostrings" ,r-biostrings)
("r-genomeinfodb" ,r-genomeinfodb) ("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicfeatures" ,r-genomicfeatures) ("r-genomicfeatures" ,r-genomicfeatures)
("r-genomicranges" ,r-genomicranges) ("r-genomicranges" ,r-genomicranges)
("r-ggbio" ,r-ggbio)
("r-ggplot2" ,r-ggplot2)
("r-gqtlstats" ,r-gqtlstats)
("r-graph" ,r-graph)
("r-gviz" ,r-gviz)
("r-homo-sapiens" ,r-homo-sapiens) ("r-homo-sapiens" ,r-homo-sapiens)
("r-iranges" ,r-iranges) ("r-iranges" ,r-iranges)
("r-rsamtools" ,r-rsamtools) ("r-rsamtools" ,r-rsamtools)
("r-rtracklayer" ,r-rtracklayer) ("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors) ("r-s4vectors" ,r-s4vectors)))
("r-snpstats" ,r-snpstats)
("r-summarizedexperiment" ,r-summarizedexperiment)
("r-variantannotation" ,r-variantannotation)))
(home-page "https://bioconductor.org/packages/gwascat") (home-page "https://bioconductor.org/packages/gwascat")
(synopsis "Tools for data in the EMBL-EBI GWAS catalog") (synopsis "Tools for data in the EMBL-EBI GWAS catalog")
(description (description