gnu: Add r-phangorn.

* gnu/packages/bioinformatics.scm (r-phangorn): New variable.
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Ricardo Wurmus 2018-03-08 23:29:59 +01:00
parent be815dbdda
commit 22a0c65969
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1 changed files with 28 additions and 0 deletions

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@ -10853,6 +10853,34 @@ are optimized per data type and for subsetted calculations such that both
memory usage and processing time is minimized.")
(license license:expat)))
(define-public r-phangorn
(package
(name "r-phangorn")
(version "2.4.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "phangorn" version))
(sha256
(base32
"0xc8k552nxczy19jr0xjjagrzc8x6lafasgk2c099ls8bc1yml1i"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ape" ,r-ape)
("r-fastmatch" ,r-fastmatch)
("r-igraph" ,r-igraph)
("r-magrittr" ,r-magrittr)
("r-matrix" ,r-matrix)
("r-quadprog" ,r-quadprog)
("r-rcpp" ,r-rcpp)))
(home-page "https://github.com/KlausVigo/phangorn")
(synopsis "Phylogenetic analysis in R")
(description
"Phangorn is a package for phylogenetic analysis in R. It supports
estimation of phylogenetic trees and networks using Maximum Likelihood,
Maximum Parsimony, distance methods and Hadamard conjugation.")
(license license:gpl2+)))
(define-public r-dropbead
(let ((commit "d746c6f3b32110428ea56d6a0001ce52a251c247")
(revision "2"))