gnu: samtools-0.1: Adapt to changes in "samtools" variable.
* gnu/packages/bioinformatics.scm (samtools-0.1)[arguments]: Add "LIBCURSES" make flag; delete "configure" phase; disable tests outside of "substitute-keyword-arguments".
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@ -2456,8 +2456,10 @@ viewer.")
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(sha256
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(sha256
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(base32 "1m33xsfwz0s8qi45lylagfllqg7fphf4dr0780rsvw75av9wk06h"))))
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(base32 "1m33xsfwz0s8qi45lylagfllqg7fphf4dr0780rsvw75av9wk06h"))))
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(arguments
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(arguments
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(substitute-keyword-arguments (package-arguments samtools)
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`(#:tests? #f ;no "check" target
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((#:tests? tests) #f) ;no "check" target
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,@(substitute-keyword-arguments (package-arguments samtools)
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((#:make-flags flags)
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`(cons "LIBCURSES=-lncurses" ,flags))
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((#:phases phases)
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((#:phases phases)
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`(modify-phases ,phases
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`(modify-phases ,phases
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(replace 'install
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(replace 'install
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@ -2467,7 +2469,8 @@ viewer.")
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(mkdir-p bin)
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(mkdir-p bin)
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(copy-file "samtools"
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(copy-file "samtools"
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(string-append bin "/samtools")))))
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(string-append bin "/samtools")))))
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(delete 'patch-tests)))))))
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(delete 'patch-tests)
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(delete 'configure))))))))
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(define-public mosaik
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(define-public mosaik
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(let ((commit "5c25216d"))
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(let ((commit "5c25216d"))
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