gnu: Add r-motifstack.
* gnu/packages/bioconductor.scm (r-motifstack): New variable.
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@ -3240,3 +3240,34 @@ motifs. It makes use of STAMP for comparing a set of motifs to a given
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database (e.g. JASPAR). It can also be used to visualize motifs, motif
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database (e.g. JASPAR). It can also be used to visualize motifs, motif
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distributions, modules and filter motifs.")
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distributions, modules and filter motifs.")
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(license license:gpl2)))
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(license license:gpl2)))
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(define-public r-motifstack
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(package
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(name "r-motifstack")
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(version "1.26.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "motifStack" version))
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(sha256
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(base32
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"1c4w39ilc4ca4wgi1b6iypadkbxvqjw7k2br0d7q03niw9qjkhxf"))))
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(properties `((upstream-name . "motifStack")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-ade4" ,r-ade4)
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("r-biostrings" ,r-biostrings)
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("r-grimport" ,r-grimport)
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("r-htmlwidgets" ,r-htmlwidgets)
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("r-motiv" ,r-motiv)
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("r-scales" ,r-scales)
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("r-xml" ,r-xml)))
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(home-page "https://bioconductor.org/packages/motifStack/")
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(synopsis "Plot stacked logos for DNA, RNA and amino acid sequences")
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(description
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"The motifStack package is designed for graphic representation of
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multiple motifs with different similarity scores. It works with both DNA/RNA
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sequence motifs and amino acid sequence motifs. In addition, it provides the
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flexibility for users to customize the graphic parameters such as the font
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type and symbol colors.")
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(license license:gpl2+)))
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