gnu: python2-bx-python: Update to 0.8.2.
* gnu/packages/bioinformatics.scm (python2-bx-python): Update to 0.8.2. [source]: Remove obsolete snippet. [inputs]: Move python2-numpy from here... [propagated-inputs]: ...to here; add python2-six. [native-inputs]: Add python2-lzo and python2-cython. [home-page]: Update to new home at Github.
This commit is contained in:
parent
1d18ee6dfd
commit
2ba2d62c69
|
@ -1477,31 +1477,27 @@ well as many of the command line options.")
|
||||||
(define-public python2-bx-python
|
(define-public python2-bx-python
|
||||||
(package
|
(package
|
||||||
(name "python2-bx-python")
|
(name "python2-bx-python")
|
||||||
(version "0.7.3")
|
(version "0.8.2")
|
||||||
(source (origin
|
(source (origin
|
||||||
(method url-fetch)
|
(method url-fetch)
|
||||||
(uri (pypi-uri "bx-python" version))
|
(uri (pypi-uri "bx-python" version))
|
||||||
(sha256
|
(sha256
|
||||||
(base32
|
(base32
|
||||||
"15z2w3bvnc0n4qmb9bd6d8ylc2h2nj883x2w9iixf4x3vki9b22i"))
|
"11kksg2rbzihpmcid823xvg42xi88m7sz58rzk29abybkxy0rszs"))))
|
||||||
(modules '((guix build utils)))
|
|
||||||
(snippet
|
|
||||||
'(begin
|
|
||||||
(substitute* "setup.py"
|
|
||||||
;; remove dependency on outdated "distribute" module
|
|
||||||
(("^from distribute_setup import use_setuptools") "")
|
|
||||||
(("^use_setuptools\\(\\)") ""))
|
|
||||||
#t))))
|
|
||||||
(build-system python-build-system)
|
(build-system python-build-system)
|
||||||
(arguments
|
(arguments
|
||||||
`(#:tests? #f ;tests fail because test data are not included
|
`(#:tests? #f ;tests fail because test data are not included
|
||||||
#:python ,python-2))
|
#:python ,python-2))
|
||||||
(inputs
|
(propagated-inputs
|
||||||
`(("python-numpy" ,python2-numpy)
|
`(("python-numpy" ,python2-numpy)
|
||||||
("zlib" ,zlib)))
|
("python-six" ,python2-six)))
|
||||||
|
(inputs
|
||||||
|
`(("zlib" ,zlib)))
|
||||||
(native-inputs
|
(native-inputs
|
||||||
`(("python-nose" ,python2-nose)))
|
`(("python-lzo" ,python2-lzo)
|
||||||
(home-page "http://bitbucket.org/james_taylor/bx-python/")
|
("python-nose" ,python2-nose)
|
||||||
|
("python-cython" ,python2-cython)))
|
||||||
|
(home-page "https://github.com/bxlab/bx-python")
|
||||||
(synopsis "Tools for manipulating biological data")
|
(synopsis "Tools for manipulating biological data")
|
||||||
(description
|
(description
|
||||||
"bx-python provides tools for manipulating biological data, particularly
|
"bx-python provides tools for manipulating biological data, particularly
|
||||||
|
|
Loading…
Reference in New Issue