gnu: Add r-rbowtie2.

* gnu/packages/bioconductor.scm (r-rbowtie2): New variable.
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Ricardo Wurmus 2019-04-03 16:59:36 +02:00
parent 83546785b2
commit 2bdc88fce7
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@ -4179,3 +4179,26 @@ Currently only Affymetrix oligonucleotide analysis is supported.")
This algorithm is based on the publication by Hart et al., 2013 (Pubmed ID This algorithm is based on the publication by Hart et al., 2013 (Pubmed ID
24215113).") 24215113).")
(license license:gpl3))) (license license:gpl3)))
(define-public r-rbowtie2
(package
(name "r-rbowtie2")
(version "1.4.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "Rbowtie2" version))
(sha256
(base32
"045cmfwqzcj4zn6r16hkpmr5sd5y0mxvrs5yynf460fdz2p418cr"))))
(properties `((upstream-name . "Rbowtie2")))
(build-system r-build-system)
(inputs
`(("zlib" ,zlib)))
(home-page "https://bioconductor.org/packages/Rbowtie2/")
(synopsis "R wrapper for Bowtie2 and AdapterRemoval")
(description
"This package provides an R wrapper of the popular @code{bowtie2}
sequencing reads aligner and @code{AdapterRemoval}, a convenient tool for
rapid adapter trimming, identification, and read merging.")
(license license:gpl3+)))