gnu: Add r-rbowtie2.
* gnu/packages/bioconductor.scm (r-rbowtie2): New variable.
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@ -4179,3 +4179,26 @@ Currently only Affymetrix oligonucleotide analysis is supported.")
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This algorithm is based on the publication by Hart et al., 2013 (Pubmed ID
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This algorithm is based on the publication by Hart et al., 2013 (Pubmed ID
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24215113).")
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24215113).")
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(license license:gpl3)))
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(license license:gpl3)))
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(define-public r-rbowtie2
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(package
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(name "r-rbowtie2")
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(version "1.4.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "Rbowtie2" version))
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(sha256
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(base32
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"045cmfwqzcj4zn6r16hkpmr5sd5y0mxvrs5yynf460fdz2p418cr"))))
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(properties `((upstream-name . "Rbowtie2")))
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(build-system r-build-system)
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(inputs
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`(("zlib" ,zlib)))
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(home-page "https://bioconductor.org/packages/Rbowtie2/")
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(synopsis "R wrapper for Bowtie2 and AdapterRemoval")
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(description
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"This package provides an R wrapper of the popular @code{bowtie2}
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sequencing reads aligner and @code{AdapterRemoval}, a convenient tool for
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rapid adapter trimming, identification, and read merging.")
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(license license:gpl3+)))
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