gnu: gemma: Fix building on 32-bit architectures.
* gnu/packages/bioinformatics.scm (gemma)[arguments]: On 32-bit architectures add 'FORCE_32BIT' flag.
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@ -97,7 +97,8 @@
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#:use-module (gnu packages xml)
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#:use-module (gnu packages xorg)
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#:use-module (gnu packages zip)
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#:use-module (srfi srfi-1))
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#:use-module (srfi srfi-1)
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#:use-module (srfi srfi-26))
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(define-public r-ape
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(package
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@ -2718,19 +2719,26 @@ comment or quality sections.")
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("zlib" ,zlib)))
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(build-system gnu-build-system)
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(arguments
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`(#:make-flags '("FORCE_DYNAMIC=1") ; use shared libs
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`(#:make-flags
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'(,@(if (any (cute string-prefix? <> (or (%current-system)
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(%current-target-system)))
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'("x86_64" "mips64el" "aarch64"))
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'("FORCE_DYNAMIC=1") ; use shared libs
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'("FORCE_DYNAMIC=1" "FORCE_32BIT=1")))
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#:phases
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(modify-phases %standard-phases
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(delete 'configure)
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(add-before 'build 'bin-mkdir
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(lambda _
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(mkdir-p "bin")))
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(mkdir-p "bin")
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#t))
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(replace 'install
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(lambda* (#:key outputs #:allow-other-keys)
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(let ((out (assoc-ref outputs "out")))
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(install-file "bin/gemma"
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(string-append
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out "/bin"))))))
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out "/bin")))
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#t)))
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#:tests? #f)) ; no tests included yet
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(home-page "https://github.com/xiangzhou/GEMMA")
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(synopsis "Tool for genome-wide efficient mixed model association")
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