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gnu: gemma: Fix building on 32-bit architectures. 

* gnu/packages/bioinformatics.scm (gemma)[arguments]: On 32-bit
architectures add 'FORCE_32BIT' flag.
This commit is contained in:
Efraim Flashner 2017-06-15 10:17:08 +03:00
parent 9ffc1f0e95
commit 2c9232ae69
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1 changed files with 12 additions and 4 deletions
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gnu/packages/bioinformatics.scm
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@ -97,7 +97,8 @@
#:use-module (gnu packages xml) #:use-module (gnu packages xml)
#:use-module (gnu packages xorg) #:use-module (gnu packages xorg)
#:use-module (gnu packages zip) #:use-module (gnu packages zip)
#:use-module (srfi srfi-1)) #:use-module (srfi srfi-1)
#:use-module (srfi srfi-26))
(define-public r-ape (define-public r-ape
(package (package
@ -2718,19 +2719,26 @@ comment or quality sections.")
("zlib" ,zlib))) ("zlib" ,zlib)))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:make-flags '("FORCE_DYNAMIC=1") ; use shared libs `(#:make-flags
'(,@(if (any (cute string-prefix? <> (or (%current-system)
(%current-target-system)))
'("x86_64" "mips64el" "aarch64"))
'("FORCE_DYNAMIC=1") ; use shared libs
'("FORCE_DYNAMIC=1" "FORCE_32BIT=1")))
#:phases #:phases
(modify-phases %standard-phases (modify-phases %standard-phases
(delete 'configure) (delete 'configure)
(add-before 'build 'bin-mkdir (add-before 'build 'bin-mkdir
(lambda _ (lambda _
(mkdir-p "bin"))) (mkdir-p "bin")
#t))
(replace 'install (replace 'install
(lambda* (#:key outputs #:allow-other-keys) (lambda* (#:key outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out"))) (let ((out (assoc-ref outputs "out")))
(install-file "bin/gemma" (install-file "bin/gemma"
(string-append (string-append
out "/bin")))))) out "/bin")))
#t)))
#:tests? #f)) ; no tests included yet #:tests? #f)) ; no tests included yet
(home-page "https://github.com/xiangzhou/GEMMA") (home-page "https://github.com/xiangzhou/GEMMA")
(synopsis "Tool for genome-wide efficient mixed model association") (synopsis "Tool for genome-wide efficient mixed model association")