From 2e2d88539ceb52369c0f20566786603f4d368c94 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 8 Nov 2018 09:12:43 +0100 Subject: [PATCH] gnu: sra-tools: Use INVOKE. * gnu/packages/bioinformatics.scm (sra-tools)[arguments]: Use INVOKE and return #T unconditionally. --- gnu/packages/bioinformatics.scm | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index b453b46873..2947b51d03 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -5712,8 +5712,7 @@ sequence itself can be retrieved from these databases.") ;; The 'configure' script doesn't recognize things like ;; '--enable-fast-install'. - (zero? (system* - "./configure" + (invoke "./configure" (string-append "--build-prefix=" (getcwd) "/build") (string-append "--prefix=" (assoc-ref outputs "out")) (string-append "--debug") @@ -5731,7 +5730,8 @@ sequence itself can be retrieved from these databases.") (string-append "--with-ngs-sdk-prefix=" (assoc-ref inputs "ngs-sdk")) (string-append "--with-hdf5-prefix=" - (assoc-ref inputs "hdf5")))))) + (assoc-ref inputs "hdf5"))) + #t)) ;; This version of sra-tools fails to build with glibc because of a ;; naming conflict. glibc-2.25/include/bits/mathcalls.h already ;; contains a definition of "canonicalize", so we rename it.