gnu: Add r-gwascat.

* gnu/packages/bioinformatics.scm (r-gwascat): New variable.
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Ricardo Wurmus 2017-11-07 17:19:25 +01:00
parent 4272000661
commit 2e4ce60e7c
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1 changed files with 40 additions and 0 deletions

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@ -10080,6 +10080,46 @@ grid graphics package. This results in genomic information plotted together
with your data.") with your data.")
(license license:artistic2.0))) (license license:artistic2.0)))
(define-public r-gwascat
(package
(name "r-gwascat")
(version "2.10.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "gwascat" version))
(sha256
(base32
"0n5x5i5v6a8wpn5mxmlpkl34b4kyypmymiwww6g61zch7xqrgywi"))))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
("r-annotationhub" ,r-annotationhub)
("r-biocgenerics" ,r-biocgenerics)
("r-biostrings" ,r-biostrings)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicfeatures" ,r-genomicfeatures)
("r-genomicranges" ,r-genomicranges)
("r-ggbio" ,r-ggbio)
("r-ggplot2" ,r-ggplot2)
("r-gqtlstats" ,r-gqtlstats)
("r-graph" ,r-graph)
("r-gviz" ,r-gviz)
("r-homo-sapiens" ,r-homo-sapiens)
("r-iranges" ,r-iranges)
("r-rsamtools" ,r-rsamtools)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)
("r-snpstats" ,r-snpstats)
("r-summarizedexperiment" ,r-summarizedexperiment)
("r-variantannotation" ,r-variantannotation)))
(home-page "https://bioconductor.org/packages/gwascat")
(synopsis "Tools for data in the EMBL-EBI GWAS catalog")
(description
"This package provides tools for representing and modeling data in the
EMBL-EBI GWAS catalog.")
(license license:artistic2.0)))
(define-public r-qvalue (define-public r-qvalue
(package (package
(name "r-qvalue") (name "r-qvalue")