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gnu: Add r-hapassoc. 

* gnu/packages/cran.scm (r-hapassoc): New variable.
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Ricardo Wurmus 2019-03-25 16:02:15 +01:00
parent a0583c0d13
commit 3080b81af6
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@ -12802,3 +12802,25 @@ following the algorithm of Yang (Evolution, 1998, 52(4):950-956). Functions
are also given to test via randomisations the significance of each F and are also given to test via randomisations the significance of each F and
variance components, using the likelihood-ratio statistics G.") variance components, using the likelihood-ratio statistics G.")
(license license:gpl2+))) (license license:gpl2+)))
(define-public r-hapassoc
(package
(name "r-hapassoc")
(version "1.2-8")
(source
(origin
(method url-fetch)
(uri (cran-uri "hapassoc" version))
(sha256
(base32
"0qs5jl0snzfchgpp6pabncwywxcmi743g91jvjiyyzw0lw85yv4s"))))
(build-system r-build-system)
(home-page "http://stat.sfu.ca/statgen/research/hapassoc.html")
(synopsis "Inference of trait associations with SNP haplotypes")
(description
"Hapassoc performs likelihood inference of trait associations with
haplotypes and other covariates in @dfn{generalized linear models} (GLMs). The
functions are developed primarily for data collected in cohort or
cross-sectional studies. They can accommodate uncertain haplotype phase and
handle missing genotypes at some SNPs.")
(license license:gpl2)))