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gnu: pigx-chipseq: Update to 0.0.8. 

* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.8.
[inputs]: Add python-magic, python-xlrd, and trim-galore.
[arguments]: Disable tests.
This commit is contained in:
Ricardo Wurmus 2018-03-19 10:45:40 +01:00
parent 2915221bcb
commit 32b7ccf9b4
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1 changed files with 7 additions and 3 deletions
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@ -12737,7 +12737,7 @@ expression report comparing samples in an easily configurable manner.")
(define-public pigx-chipseq (define-public pigx-chipseq
(package (package
(name "pigx-chipseq") (name "pigx-chipseq")
(version "0.0.2") (version "0.0.8")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://github.com/BIMSBbioinfo/pigx_chipseq/" (uri (string-append "https://github.com/BIMSBbioinfo/pigx_chipseq/"
@ -12745,10 +12745,11 @@ expression report comparing samples in an easily configurable manner.")
"/pigx_chipseq-" version ".tar.gz")) "/pigx_chipseq-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"1jliwhifnjgl9x0z730bzpxswi2s84fyg5y8cagbyzpw509452f5")))) "1plw0bz0b7flj0g9irbn8n520005lmajkiq5flpizzapsl0a0r9g"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:phases `(#:tests? #f ; parts of the tests rely on access to the network
#:phases
(modify-phases %standard-phases (modify-phases %standard-phases
(add-after 'install 'wrap-executable (add-after 'install 'wrap-executable
;; Make sure the executable finds all R modules. ;; Make sure the executable finds all R modules.
@ -12773,8 +12774,11 @@ expression report comparing samples in an easily configurable manner.")
("r-ggplot2" ,r-ggplot2) ("r-ggplot2" ,r-ggplot2)
("r-plotly" ,r-plotly) ("r-plotly" ,r-plotly)
("python-wrapper" ,python-wrapper) ("python-wrapper" ,python-wrapper)
("python-magic" ,python-magic)
("python-pyyaml" ,python-pyyaml) ("python-pyyaml" ,python-pyyaml)
("python-xlrd" ,python-xlrd)
("snakemake" ,snakemake) ("snakemake" ,snakemake)
("trim-galore" ,trim-galore)
("macs" ,macs) ("macs" ,macs)
("multiqc" ,multiqc) ("multiqc" ,multiqc)
("perl" ,perl) ("perl" ,perl)