nixo
/
guix-devel
1
0
Fork 0
Code Issues Pull Requests Releases Wiki Activity

gnu: r-seurat: Update to 3.1.0. 

* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.1.0.
[propagated-inputs]: Add r-leiden, r-rcppannoy, and r-uwot.
This commit is contained in:
Ricardo Wurmus 2019-09-02 14:39:11 +02:00
parent 91addfe05c
commit 32fcd898f0
No known key found for this signature in database
GPG Key ID: 197A5888235FACAC
1 changed files with 6 additions and 3 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

9
gnu/packages/bioinformatics.scm
View File

@ -9457,13 +9457,13 @@ and irregular enzymatic cleavages, mass measurement accuracy, etc.")
(define-public r-seurat (define-public r-seurat
(package (package
(name "r-seurat") (name "r-seurat")
(version "3.0.2") (version "3.1.0")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "Seurat" version)) (uri (cran-uri "Seurat" version))
(sha256 (sha256
(base32 (base32
"016fgcmjz3sjfxdvam5hd7mdxpmpnc7f6p5zqlh97m21dgn5vpqn")))) "0icxndnnkkmmr9hhd01dv3w8pih7x9r0rlp3fq9pk3qajp9gmlyq"))))
(properties `((upstream-name . "Seurat"))) (properties `((upstream-name . "Seurat")))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
@ -9480,6 +9480,7 @@ and irregular enzymatic cleavages, mass measurement accuracy, etc.")
("r-igraph" ,r-igraph) ("r-igraph" ,r-igraph)
("r-irlba" ,r-irlba) ("r-irlba" ,r-irlba)
("r-kernsmooth" ,r-kernsmooth) ("r-kernsmooth" ,r-kernsmooth)
("r-leiden" ,r-leiden)
("r-lmtest" ,r-lmtest) ("r-lmtest" ,r-lmtest)
("r-mass" ,r-mass) ("r-mass" ,r-mass)
("r-matrix" ,r-matrix) ("r-matrix" ,r-matrix)
@ -9490,6 +9491,7 @@ and irregular enzymatic cleavages, mass measurement accuracy, etc.")
("r-rann" ,r-rann) ("r-rann" ,r-rann)
("r-rcolorbrewer" ,r-rcolorbrewer) ("r-rcolorbrewer" ,r-rcolorbrewer)
("r-rcpp" ,r-rcpp) ("r-rcpp" ,r-rcpp)
("r-rcppannoy" ,r-rcppannoy)
("r-rcppeigen" ,r-rcppeigen) ("r-rcppeigen" ,r-rcppeigen)
("r-rcppprogress" ,r-rcppprogress) ("r-rcppprogress" ,r-rcppprogress)
("r-reticulate" ,r-reticulate) ("r-reticulate" ,r-reticulate)
@ -9500,7 +9502,8 @@ and irregular enzymatic cleavages, mass measurement accuracy, etc.")
("r-scales" ,r-scales) ("r-scales" ,r-scales)
("r-sctransform" ,r-sctransform) ("r-sctransform" ,r-sctransform)
("r-sdmtools" ,r-sdmtools) ("r-sdmtools" ,r-sdmtools)
("r-tsne" ,r-tsne))) ("r-tsne" ,r-tsne)
("r-uwot" ,r-uwot)))
(home-page "http://www.satijalab.org/seurat") (home-page "http://www.satijalab.org/seurat")
(synopsis "Seurat is an R toolkit for single cell genomics") (synopsis "Seurat is an R toolkit for single cell genomics")
(description (description