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gnu: bedops: Use INVOKE. 

* gnu/packages/bioinformatics.scm (bedops)[arguments]: Use INVOKE.
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Ricardo Wurmus 2018-10-20 22:05:10 +02:00
parent c793f4d8fb
commit 337d72fb44
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1 changed files with 3 additions and 3 deletions
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@ -367,9 +367,9 @@ transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed.")
;; Unpack the tarballs to benefit from shebang patching. ;; Unpack the tarballs to benefit from shebang patching.
(with-directory-excursion "third-party" (with-directory-excursion "third-party"
(and (zero? (system* "tar" "xvf" "jansson-2.6.tar.bz2")) (invoke "tar" "xvf" "jansson-2.6.tar.bz2")
(zero? (system* "tar" "xvf" "zlib-1.2.7.tar.bz2")) (invoke "tar" "xvf" "zlib-1.2.7.tar.bz2")
(zero? (system* "tar" "xvf" "bzip2-1.0.6.tar.bz2")))) (invoke "tar" "xvf" "bzip2-1.0.6.tar.bz2"))
;; Disable unpacking of tarballs in Makefile. ;; Disable unpacking of tarballs in Makefile.
(substitute* "system.mk/Makefile.linux" (substitute* "system.mk/Makefile.linux"
(("^\tbzcat .*") "\t@echo \"not unpacking\"\n") (("^\tbzcat .*") "\t@echo \"not unpacking\"\n")