gnu: Add gap.

* gnu/packages/algebra.scm (gap): New variable.
master
Andreas Enge 2019-02-17 17:46:10 +01:00
parent 966aa714c8
commit 3f074a21f0
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@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017, 2018 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2013, 2015, 2017, 2018 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2016, 2017, 2018, 2019 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2014, 2018 Mark H Weaver <mhw@netris.org>
@ -856,3 +856,147 @@ xtensor provides:
@item tools to manipulate array expressions and build upon xtensor.
@end itemize")
(license license:bsd-3)))
(define-public gap
(package
(name "gap")
(version "4.10.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://www.gap-system.org/pub/gap/gap-"
(version-major+minor version)
"/tar.bz2/gap-"
version
".tar.bz2"))
(sha256
(base32
"1dmb8v4p7j1nnf7sx8sg54b49yln36bi9acwp7w1d3a1nxj17ird"))
(modules '((guix build utils) (ice-9 ftw) (srfi srfi-1)))
(snippet
'(begin
;; Delete the external gmp and zlib libraries
;; and a subdirectory not needed for our build.
(for-each delete-file-recursively
'("extern" "hpcgap"))
;; Delete a failing test.
;; FIXME: This might be fixed in the next release, see
;; https://github.com/gap-system/gap/issues/3292
(delete-file "tst/testinstall/dir.tst")
;; Delete all packages except for a fixed list.
(with-directory-excursion "pkg"
(for-each delete-file-recursively
(lset-difference string=? (scandir ".")
'("." ".."
;; Necessary packages.
"GAPDoc-1.6.2"
"primgrp-3.3.2"
"SmallGrp-1.3" ; artistic2.0
"transgrp" ; artistic2.0 for data,
; gpl2 or gpl3 for code
;; Recommanded package.
"io-4.5.4" ; gpl3+
;; Optional packages, searched for at start,
;; and their depedencies.
"alnuth-3.1.0"
"AutoDoc-2018.09.20"
"autpgrp-1.10"
"crisp-1.4.4" ; bsd-2
; "ctbllib" ; no explicit license, drop
"FactInt-1.6.2"
"fga"
"irredsol-1.4" ; bsd-2
"laguna-3.9.0"
"polenta-1.3.8"
"polycyclic-2.14"
"radiroot-2.8"
"resclasses-4.7.1"
"sophus-1.24"
; "tomlib-1.2.7" ; no explicit license, drop
"utils-0.59"))))
#t))))
(build-system gnu-build-system)
(inputs
`(("gmp" ,gmp)
("zlib" ,zlib)))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'build 'build-packages
;; Compile all packages that have not been deleted by the
;; code snippet above.
(lambda _
(setenv "CONFIG_SHELL" (which "bash"))
(with-directory-excursion "pkg"
(invoke "../bin/BuildPackages.sh")
#t)))
(add-after 'build-packages 'build-doc
;; The documentation is bundled, but we create it from source.
(lambda _
(with-directory-excursion "doc"
(invoke "./make_doc"))
#t))
(replace 'check
(lambda _
;; "make check" is expected to appear in gap-4.10.1
(invoke "./gap" "tst/testinstall.g")
#t))
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(bin (string-append out "/bin"))
(prog (string-append bin "/gap"))
(prog-real (string-append bin "/.gap-real"))
(share (string-append out "/share/gap"))
(include (string-append out "/include/gap")))
;; Install only the gap binary; the gac compiler is left
;; for maybe later. "Wrap" it in a shell script that calls
;; the binary with the correct parameter.
(mkdir-p bin)
(copy-file "gap" prog-real)
(call-with-output-file prog
(lambda (port)
(format port
"#!~a~%exec ~a -l ~a \"$@\"~%"
(which "bash")
prog-real
share)))
(chmod prog #o755)
;; Install the headers and the library, which are needed by
;; Sage. The Makefile targets are available in gap-4.10.0,
;; but planned to be removed in gap-4.10.1.
(invoke "make" "install-headers")
(invoke "make" "install-libgap")
(install-file "gen/config.h" include)
;; Install a certain number of files and directories to
;; SHARE, where the wrapped shell script expects them.
;; Remove information on the build directory from sysinfo.gap.
(substitute* "sysinfo.gap"
(("GAP_BIN_DIR=\".*\"") "GAP_BIN_DIR=\"\"")
(("GAP_LIB_DIR=\".*\"") "GAP_LIB_DIR=\"\"")
(("GAP_CPPFLAGS=\".*\"") "GAP_CPPFLAGS=\"\""))
(install-file "sysinfo.gap" share)
(copy-recursively "grp" (string-append share "/grp"))
(copy-recursively "pkg" (string-append share "/pkg"))
;; The following is not the C library libgap.so, but a
;; library of GAP code.
(copy-recursively "lib" (string-append share "/lib"))
;; The gap binary looks for documentation inside SHARE.
(copy-recursively "doc" (string-append share "/doc")))
#t)))))
(home-page "https://www.gap-system.org/")
(synopsis
"System for computational group theory")
(description
"GAP is a system for computational discrete algebra, with particular
emphasis on computational group theory. It provides a programming language,
a library of thousands of functions implementing algebraic algorithms
written in the GAP language as well as large data libraries of algebraic
objects.")
;; Some packages have different licenses (effectively forcing the
;; combined work to be licensed as gpl3+); if this is the case, this
;; is mentioned above next to their name.
;; Some packages have no license mentioned explicitly; supposedly this
;; means that the gpl2+ licence of GAP itself applies, but to be on the
;; safe side, we drop them for now.
(license license:gpl2+)))