gnu: Add r-chipexoqual.

* gnu/packages/bioconductor.scm (r-chipexoqual): New variable.
master
Ricardo Wurmus 2018-11-27 23:23:20 +01:00
parent 4236959de8
commit 41ffc214e4
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1 changed files with 38 additions and 0 deletions

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@ -1030,3 +1030,41 @@ maps.")
"This package provides tools to parse Illumina Sequence Analysis "This package provides tools to parse Illumina Sequence Analysis
Viewer (SAV) files, access data, and generate QC plots.") Viewer (SAV) files, access data, and generate QC plots.")
(license license:agpl3+))) (license license:agpl3+)))
(define-public r-chipexoqual
(package
(name "r-chipexoqual")
(version "1.6.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "ChIPexoQual" version))
(sha256
(base32
"1773bpiybn4g9jlv46z29x19q4dpcvn7lairr3lq5pdqbqmz5hnp"))))
(properties `((upstream-name . "ChIPexoQual")))
(build-system r-build-system)
(propagated-inputs
`(("r-biocparallel" ,r-biocparallel)
("r-biovizbase" ,r-biovizbase)
("r-broom" ,r-broom)
("r-data-table" ,r-data-table)
("r-dplyr" ,r-dplyr)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicalignments" ,r-genomicalignments)
("r-genomicranges" ,r-genomicranges)
("r-ggplot2" ,r-ggplot2)
("r-hexbin" ,r-hexbin)
("r-iranges" ,r-iranges)
("r-rcolorbrewer" ,r-rcolorbrewer)
("r-rmarkdown" ,r-rmarkdown)
("r-rsamtools" ,r-rsamtools)
("r-s4vectors" ,r-s4vectors)
("r-scales" ,r-scales)
("r-viridis" ,r-viridis)))
(home-page "https://github.com/keleslab/ChIPexoQual")
(synopsis "Quality control pipeline for ChIP-exo/nexus data")
(description
"This package provides a quality control pipeline for ChIP-exo/nexus
sequencing data.")
(license license:gpl2+)))