gnu: Add r-homo-sapiens.
* gnu/packages/bioinformatics.scm (r-homo-sapiens): New variable.
This commit is contained in:
parent
b52a866d14
commit
421c68e3f7
|
@ -9881,6 +9881,38 @@ the earlier snpMatrix package, allowing for uncertainty in genotypes.")
|
||||||
on mapping using Entrez Gene identifiers.")
|
on mapping using Entrez Gene identifiers.")
|
||||||
(license license:artistic2.0)))
|
(license license:artistic2.0)))
|
||||||
|
|
||||||
|
(define-public r-homo-sapiens
|
||||||
|
(package
|
||||||
|
(name "r-homo-sapiens")
|
||||||
|
(version "1.3.1")
|
||||||
|
(source (origin
|
||||||
|
(method url-fetch)
|
||||||
|
;; We cannot use bioconductor-uri here because this tarball is
|
||||||
|
;; located under "data/annotation/" instead of "bioc/".
|
||||||
|
(uri (string-append "http://www.bioconductor.org/packages/"
|
||||||
|
"release/data/annotation/src/contrib/"
|
||||||
|
"Homo.sapiens_"
|
||||||
|
version ".tar.gz"))
|
||||||
|
(sha256
|
||||||
|
(base32
|
||||||
|
"151vj7h5p1c8yd5swrchk46z469p135wk50hvkl0nhgndvy0jj01"))))
|
||||||
|
(properties
|
||||||
|
`((upstream-name . "Homo.sapiens")))
|
||||||
|
(build-system r-build-system)
|
||||||
|
(propagated-inputs
|
||||||
|
`(("r-genomicfeatures" ,r-genomicfeatures)
|
||||||
|
("r-go-db" ,r-go-db)
|
||||||
|
("r-org-hs-eg-db" ,r-org-hs-eg-db)
|
||||||
|
("r-txdb-hsapiens-ucsc-hg19-knowngene" ,r-txdb-hsapiens-ucsc-hg19-knowngene)
|
||||||
|
("r-organismdbi" ,r-organismdbi)
|
||||||
|
("r-annotationdbi" ,r-annotationdbi)))
|
||||||
|
(home-page "https://bioconductor.org/packages/Homo.sapiens/")
|
||||||
|
(synopsis "Annotation package for the Homo.sapiens object")
|
||||||
|
(description
|
||||||
|
"This package contains the Homo.sapiens object to access data from
|
||||||
|
several related annotation packages.")
|
||||||
|
(license license:artistic2.0)))
|
||||||
|
|
||||||
(define-public r-qvalue
|
(define-public r-qvalue
|
||||||
(package
|
(package
|
||||||
(name "r-qvalue")
|
(name "r-qvalue")
|
||||||
|
|
Loading…
Reference in New Issue