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gnu: r-scran: Update to 1.12.0. 

* gnu/packages/bioinformatics.scm (r-scran): Update to 1.12.0.
[propagated-inputs]: Add r-bh, r-biocsingular, and r-dqrng; remove r-rhdf5lib.
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Ricardo Wurmus 2019-05-05 23:42:47 +02:00
parent f2a63d1588
commit 4540727a21
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1 changed files with 5 additions and 3 deletions
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gnu/packages/bioinformatics.scm
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@ -10606,29 +10606,31 @@ quality control.")
(define-public r-scran (define-public r-scran
(package (package
(name "r-scran") (name "r-scran")
(version "1.10.2") (version "1.12.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "scran" version)) (uri (bioconductor-uri "scran" version))
(sha256 (sha256
(base32 (base32
"07mgilr3gq3lnrm1fjm9zhz4w7970bjhsykln1drqy9gkzj5sn7g")))) "19cyjjzgmhswni6js4bhbj5djp976sl9n648kk7viazgkspql884"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-beachmat" ,r-beachmat) `(("r-beachmat" ,r-beachmat)
("r-bh" ,r-bh)
("r-biocgenerics" ,r-biocgenerics) ("r-biocgenerics" ,r-biocgenerics)
("r-biocneighbors" ,r-biocneighbors) ("r-biocneighbors" ,r-biocneighbors)
("r-biocparallel" ,r-biocparallel) ("r-biocparallel" ,r-biocparallel)
("r-biocsingular" ,r-biocsingular)
("r-delayedarray" ,r-delayedarray) ("r-delayedarray" ,r-delayedarray)
("r-delayedmatrixstats" ,r-delayedmatrixstats) ("r-delayedmatrixstats" ,r-delayedmatrixstats)
("r-dqrng" ,r-dqrng)
("r-dynamictreecut" ,r-dynamictreecut) ("r-dynamictreecut" ,r-dynamictreecut)
("r-edger" ,r-edger) ("r-edger" ,r-edger)
("r-igraph" ,r-igraph) ("r-igraph" ,r-igraph)
("r-limma" ,r-limma) ("r-limma" ,r-limma)
("r-matrix" ,r-matrix) ("r-matrix" ,r-matrix)
("r-rcpp" ,r-rcpp) ("r-rcpp" ,r-rcpp)
("r-rhdf5lib" ,r-rhdf5lib)
("r-s4vectors" ,r-s4vectors) ("r-s4vectors" ,r-s4vectors)
("r-scater" ,r-scater) ("r-scater" ,r-scater)
("r-singlecellexperiment" ,r-singlecellexperiment) ("r-singlecellexperiment" ,r-singlecellexperiment)