gnu: Add r-simpleaffy.

* gnu/packages/bioconductor.scm (r-simpleaffy): New variable.
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Ricardo Wurmus 2019-03-29 22:19:30 +01:00
parent e99380d67b
commit 4675b3cfa3
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@ -3798,3 +3798,31 @@ affinity is estimated in an NSB experiment in which only NSB but no
gene-specific bidning is expected.") gene-specific bidning is expected.")
;; Any version of the LGPL ;; Any version of the LGPL
(license license:lgpl2.1+))) (license license:lgpl2.1+)))
(define-public r-simpleaffy
(package
(name "r-simpleaffy")
(version "2.58.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "simpleaffy" version))
(sha256
(base32
"0bry0d2vw0w2rrpnmfm1kl5v4rdclypmy33jvs9l43vd6vx2ra9s"))))
(build-system r-build-system)
(propagated-inputs
`(("r-affy" ,r-affy)
("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-gcrma" ,r-gcrma)
("r-genefilter" ,r-genefilter)))
(home-page "https://bioconductor.org/packages/simpleaffy/")
(synopsis "Very simple high level analysis of Affymetrix data")
(description
"This package provides high level functions for reading Affy @file{.CEL}
files, phenotypic data, and then computing simple things with it, such as
t-tests, fold changes and the like. It makes heavy use of the @code{affy}
library. It also has some basic scatter plot functions and mechanisms for
generating high resolution journal figures.")
(license license:gpl2+)))