gnu: r-acsnminer: Move to (gnu packages cran).
* gnu/packages/bioinformatics.scm (r-acsnminer): Move from here... * gnu/packages/cran.scm (r-acsnminer): ...to here.
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@ -7243,32 +7243,6 @@ BLAST, KEGG, GenBank, MEDLINE and GO.")
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;; (LGPLv2.1+) and scripts in samples (which have GPL2 and GPL2+)
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;; (LGPLv2.1+) and scripts in samples (which have GPL2 and GPL2+)
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(license (list license:ruby license:lgpl2.1+ license:gpl2+ ))))
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(license (list license:ruby license:lgpl2.1+ license:gpl2+ ))))
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(define-public r-acsnminer
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(package
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(name "r-acsnminer")
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(version "0.16.8.25")
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(source (origin
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(method url-fetch)
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(uri (cran-uri "ACSNMineR" version))
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(sha256
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(base32
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"0gh604s8qall6zfjlwcg2ilxjvz08dplf9k5g47idhv43scm748l"))))
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(properties `((upstream-name . "ACSNMineR")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-ggplot2" ,r-ggplot2)
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("r-gridextra" ,r-gridextra)))
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(home-page "https://cran.r-project.org/web/packages/ACSNMineR")
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(synopsis "Gene enrichment analysis")
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(description
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"This package provides tools to compute and represent gene set enrichment
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or depletion from your data based on pre-saved maps from the @dfn{Atlas of
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Cancer Signalling Networks} (ACSN) or user imported maps. The gene set
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enrichment can be run with hypergeometric test or Fisher exact test, and can
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use multiple corrections. Visualization of data can be done either by
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barplots or heatmaps.")
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(license license:gpl2+)))
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(define-public r-biocinstaller
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(define-public r-biocinstaller
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(package
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(package
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(name "r-biocinstaller")
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(name "r-biocinstaller")
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@ -12023,6 +12023,32 @@ statistics, with applications to @dfn{single-nucleotide polymorphism} (SNP)
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data.")
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data.")
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(license license:gpl2+)))
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(license license:gpl2+)))
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(define-public r-acsnminer
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(package
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(name "r-acsnminer")
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(version "0.16.8.25")
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(source (origin
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(method url-fetch)
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(uri (cran-uri "ACSNMineR" version))
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(sha256
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(base32
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"0gh604s8qall6zfjlwcg2ilxjvz08dplf9k5g47idhv43scm748l"))))
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(properties `((upstream-name . "ACSNMineR")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-ggplot2" ,r-ggplot2)
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("r-gridextra" ,r-gridextra)))
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(home-page "https://cran.r-project.org/web/packages/ACSNMineR")
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(synopsis "Gene enrichment analysis")
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(description
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"This package provides tools to compute and represent gene set enrichment
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or depletion from your data based on pre-saved maps from the @dfn{Atlas of
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Cancer Signalling Networks} (ACSN) or user imported maps. The gene set
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enrichment can be run with hypergeometric test or Fisher exact test, and can
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use multiple corrections. Visualization of data can be done either by
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barplots or heatmaps.")
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(license license:gpl2+)))
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(define-public r-units
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(define-public r-units
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(package
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(package
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(name "r-units")
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(name "r-units")
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