gnu: flexbar: Enable tests.
* gnu/packages/bioinformatics.scm (flexbar): Enable tests.
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@ -623,15 +623,20 @@ results. The FASTX-Toolkit tools perform some of these preprocessing tasks.")
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"13jaykc3y1x8y5nn9j8ljnb79s5y51kyxz46hdmvvjj6qhyympmf"))))
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(build-system cmake-build-system)
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(arguments
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`(;; There is no test target, although there is a directory containing
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;; test data and scripts (launched by flexbar_validate.sh).
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#:tests? #f
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#:configure-flags (list
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`(#:configure-flags (list
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(string-append "-DFLEXBAR_BINARY_DIR="
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(assoc-ref %outputs "out")
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"/bin/"))
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#:phases
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(alist-delete 'install %standard-phases)))
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(alist-replace
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'check
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(lambda* (#:key outputs #:allow-other-keys)
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(setenv "PATH" (string-append
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(assoc-ref outputs "out") "/bin:"
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(getenv "PATH")))
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(chdir "../flexbar_v2.5_src/test")
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(zero? (system* "bash" "flexbar_validate.sh")))
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(alist-delete 'install %standard-phases))))
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(inputs
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`(("tbb" ,tbb)
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("zlib" ,zlib)))
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