gnu: Add r-affycompatible.

* gnu/packages/bioconductor.scm (r-affycompatible): New variable.
master
Ricardo Wurmus 2019-09-15 20:53:21 +02:00
parent 5cf940de21
commit 5094aa9472
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@ -1002,6 +1002,34 @@ packages.")
measures for Affymetrix Oligonucleotide Arrays.")
(license license:gpl2+)))
(define-public r-affycompatible
(package
(name "r-affycompatible")
(version "1.44.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "AffyCompatible" version))
(sha256
(base32
"1zi96qa6vkgwvvy5cn6c3p1kbfsaz74zsw2kjxarz5qs744f0xvs"))))
(properties
`((upstream-name . "AffyCompatible")))
(build-system r-build-system)
(propagated-inputs
`(("r-biostrings" ,r-biostrings)
("r-rcurl" ,r-rcurl)
("r-xml" ,r-xml)))
(home-page "https://bioconductor.org/packages/AffyCompatible/")
(synopsis "Work with Affymetrix GeneChip files")
(description
"This package provides an interface to Affymetrix chip annotation and
sample attribute files. The package allows an easy way for users to download
and manage local data bases of Affynmetrix NetAffx annotation files. It also
provides access to @dfn{GeneChip Operating System} (GCOS) and @dfn{GeneChip
Command Console} (AGCC)-compatible sample annotation files.")
(license license:artistic2.0)))
(define-public r-annotate
(package
(name "r-annotate")