gnu: Add python-mpi4py.

* gnu/packages/mpi.scm (python-mpi4py): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
master
Paul Garlick 2018-11-12 16:00:33 +00:00 committed by Ludovic Courtès
parent 0fe1fba4af
commit 54fcd547b3
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@ -6,6 +6,7 @@
;;; Copyright © 2017 Dave Love <fx@gnu.org>
;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Paul Garlick <pgarlick@tourbillion-technology.com>
;;;
;;; This file is part of GNU Guix.
;;;
@ -29,6 +30,7 @@
#:use-module (guix download)
#:use-module (guix utils)
#:use-module (guix build-system gnu)
#:use-module (guix build-system python)
#:use-module (gnu packages)
#:use-module (gnu packages gcc)
#:use-module (gnu packages linux)
@ -263,3 +265,43 @@ only provides @code{MPI_THREAD_FUNNELED}.")))
;; in the build environment than the package wants while testing.
(setenv "OMPI_MCA_rmaps_base_oversubscribe" "yes")
#t))
(define-public python-mpi4py
(package
(name "python-mpi4py")
(version "3.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "mpi4py" version))
(sha256
(base32
"1mzgd26dfv4vwbci8gq77ss9f0x26i9aqzq9b9vs9ndxhlnv0mxl"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'build 'mpi-setup
,%openmpi-setup)
(add-before 'check 'pre-check
(lambda _
;; Skip BaseTestSpawn class (causes error 'ompi_dpm_dyn_init()
;; failed --> Returned "Unreachable"' in chroot environment).
(substitute* "test/test_spawn.py"
(("unittest.skipMPI\\('openmpi\\(<3.0.0\\)'\\)")
"unittest.skipMPI('openmpi')"))
#t)))))
(inputs
`(("openmpi" ,openmpi)))
(home-page "https://bitbucket.org/mpi4py/mpi4py/")
(synopsis "Python bindings for the Message Passing Interface standard")
(description "MPI for Python (mpi4py) provides bindings of the Message
Passing Interface (MPI) standard for the Python programming language, allowing
any Python program to exploit multiple processors.
mpi4py is constructed on top of the MPI-1/MPI-2 specification and provides an
object oriented interface which closely follows MPI-2 C++ bindings. It
supports point-to-point and collective communications of any picklable Python
object as well as optimized communications of Python objects (such as NumPy
arrays) that expose a buffer interface.")
(license bsd-3)))