gnu: Add r-ebimage.
* gnu/packages/bioconductor.scm (r-ebimage): New variable.
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@ -30,6 +30,7 @@
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#:use-module (gnu packages gcc)
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#:use-module (gnu packages gcc)
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#:use-module (gnu packages graph)
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#:use-module (gnu packages graph)
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#:use-module (gnu packages haskell)
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#:use-module (gnu packages haskell)
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#:use-module (gnu packages image)
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#:use-module (gnu packages maths)
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#:use-module (gnu packages maths)
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#:use-module (gnu packages pkg-config)
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#:use-module (gnu packages pkg-config)
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#:use-module (gnu packages statistics)
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#:use-module (gnu packages statistics)
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@ -3586,3 +3587,42 @@ procedure. In addition, since the cells are evaluated individually, it can
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easily be applied to bigger datasets, subsetting the expression matrix if
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easily be applied to bigger datasets, subsetting the expression matrix if
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needed.")
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needed.")
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(license license:gpl3)))
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(license license:gpl3)))
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(define-public r-ebimage
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(package
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(name "r-ebimage")
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(version "4.24.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "EBImage" version))
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(sha256
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(base32
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"18v2zr7xh0d0xbs7mxa2b6xjqlqiml0hji27gq1351xp5bf2pxvx"))))
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(properties `((upstream-name . "EBImage")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-abind" ,r-abind)
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("r-biocgenerics" ,r-biocgenerics)
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("r-fftwtools" ,r-fftwtools)
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("r-htmltools" ,r-htmltools)
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("r-htmlwidgets" ,r-htmlwidgets)
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("r-jpeg" ,r-jpeg)
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("r-locfit" ,r-locfit)
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("r-png" ,r-png)
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("r-rcurl" ,r-rcurl)
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("r-tiff" ,r-tiff)))
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(native-inputs
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`(("r-knitr" ,r-knitr))) ; for vignettes
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(home-page "https://github.com/aoles/EBImage")
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(synopsis "Image processing and analysis toolbox for R")
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(description
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"EBImage provides general purpose functionality for image processing and
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analysis. In the context of (high-throughput) microscopy-based cellular
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assays, EBImage offers tools to segment cells and extract quantitative
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cellular descriptors. This allows the automation of such tasks using the R
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programming language and facilitates the use of other tools in the R
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environment for signal processing, statistical modeling, machine learning and
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visualization with image data.")
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;; Any version of the LGPL.
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(license license:lgpl2.1+)))
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