gnu: ngs-java: Update to 1.2.2.
* gnu/packages/bioinformatics.scm (ngs-java): Update to 1.2.2. [arguments]: Remove build phase "fix-java-symlink-installation".
This commit is contained in:
parent
d6a1cd7cae
commit
614a8977cb
|
@ -2389,26 +2389,8 @@ simultaneously.")
|
|||
(srfi srfi-26))
|
||||
,@(package-arguments ngs-sdk))
|
||||
((#:phases phases)
|
||||
`(alist-cons-after
|
||||
'enter-dir 'fix-java-symlink-installation
|
||||
(lambda _
|
||||
;; Only replace the version suffix, not the version number in
|
||||
;; the directory name. Reported here:
|
||||
;; https://github.com/ncbi/ngs/pull/4
|
||||
(substitute* "Makefile.java"
|
||||
(((string-append "\\$\\(subst "
|
||||
"(\\$\\(VERSION[^\\)]*\\)),"
|
||||
"(\\$\\([^\\)]+\\)),"
|
||||
"(\\$\\([^\\)]+\\)|\\$\\@)"
|
||||
"\\)")
|
||||
_ pattern replacement target)
|
||||
(string-append "$(patsubst "
|
||||
"%" pattern ","
|
||||
"%" replacement ","
|
||||
target ")"))))
|
||||
(alist-replace
|
||||
'enter-dir (lambda _ (chdir "ngs-java") #t)
|
||||
,phases))))))
|
||||
`(modify-phases ,phases
|
||||
(replace 'enter-dir (lambda _ (chdir "ngs-java") #t)))))))
|
||||
(inputs
|
||||
`(("jdk" ,icedtea6 "jdk")
|
||||
("ngs-sdk" ,ngs-sdk)))
|
||||
|
|
Loading…
Reference in New Issue