gnu: Add r-chipseq.
* gnu/packages/bioinformatics.scm (r-chipseq): New variable.
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;;; GNU Guix --- Functional package management for GNU
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;;; GNU Guix --- Functional package management for GNU
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;;; Copyright © 2014, 2015, 2016 Ricardo Wurmus <rekado@elephly.net>
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;;; Copyright © 2014, 2015, 2016, 2017 Ricardo Wurmus <rekado@elephly.net>
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;;; Copyright © 2015, 2016 Ben Woodcroft <donttrustben@gmail.com>
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;;; Copyright © 2015, 2016 Ben Woodcroft <donttrustben@gmail.com>
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;;; Copyright © 2015, 2016 Pjotr Prins <pjotr.guix@thebird.nl>
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;;; Copyright © 2015, 2016 Pjotr Prins <pjotr.guix@thebird.nl>
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;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
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;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
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@ -7869,3 +7869,28 @@ replacement for strverscmp.")
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samples into a single report. It contains modules for a large number of
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samples into a single report. It contains modules for a large number of
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common bioinformatics tools.")
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common bioinformatics tools.")
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(license license:gpl3)))
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(license license:gpl3)))
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(define-public r-chipseq
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(package
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(name "r-chipseq")
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(version "1.24.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "chipseq" version))
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(sha256
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(base32
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"115ayp82rs99iaswrx45skw1i5iacgwzz5k8rzijbp5qic0554n0"))))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biocgenerics" ,r-biocgenerics)
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("r-genomicranges" ,r-genomicranges)
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("r-iranges" ,r-iranges)
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("r-s4vectors" ,r-s4vectors)
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("r-shortread" ,r-shortread)))
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(home-page "http://bioconductor.org/packages/chipseq")
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(synopsis "Package for analyzing ChIPseq data")
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(description
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"This package provides tools for processing short read data from ChIPseq
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experiments.")
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(license license:artistic2.0)))
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