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guix: Update to Bioconductor 3.9. 

* guix/build-system/r.scm (bioconductor-uri): Use 3.9 archive URL.
* guix/import/cran.scm (%bioconductor-version): Update to 3.9.
This commit is contained in:
Ricardo Wurmus 2019-05-04 10:26:31 +02:00
parent 123e424e95
commit 6490cd31cc
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2 changed files with 3 additions and 3 deletions
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2
guix/build-system/r.scm
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@ -53,7 +53,7 @@ release corresponding to NAME and VERSION."
(list (string-append "https://bioconductor.org/packages/release/bioc/src/contrib/" (list (string-append "https://bioconductor.org/packages/release/bioc/src/contrib/"
name "_" version ".tar.gz") name "_" version ".tar.gz")
;; TODO: use %bioconductor-version from (guix import cran) ;; TODO: use %bioconductor-version from (guix import cran)
(string-append "https://bioconductor.org/packages/3.8/bioc/src/contrib/Archive/" (string-append "https://bioconductor.org/packages/3.9/bioc/src/contrib/Archive/"
name "_" version ".tar.gz"))) name "_" version ".tar.gz")))
(define %r-build-system-modules (define %r-build-system-modules

4
guix/import/cran.scm
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@ -128,9 +128,9 @@ package definition."
(define %cran-url "https://cran.r-project.org/web/packages/") (define %cran-url "https://cran.r-project.org/web/packages/")
(define %bioconductor-url "https://bioconductor.org/packages/") (define %bioconductor-url "https://bioconductor.org/packages/")
;; The latest Bioconductor release is 3.8. Bioconductor packages should be ;; The latest Bioconductor release is 3.9. Bioconductor packages should be
;; updated together. ;; updated together.
(define %bioconductor-version "3.8") (define %bioconductor-version "3.9")
(define %bioconductor-packages-list-url (define %bioconductor-packages-list-url
(string-append "https://bioconductor.org/packages/" (string-append "https://bioconductor.org/packages/"