import cran: Add "recursive" option.
* guix/scripts/import/cran.scm: (%options): Add "recursive" option. (guix-import-cran): Handle "recursive" option. * doc/guix.texi (Invoking guix import): Document it.
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@ -5148,6 +5148,10 @@ R package:
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guix import cran Cairo
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@end example
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When @code{--recursive} is added, the importer will traverse the
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dependency graph of the given upstream package recursively and generate
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package expressions for all those packages that are not yet in Guix.
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When @code{--archive=bioconductor} is added, metadata is imported from
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@uref{http://www.bioconductor.org/, Bioconductor}, a repository of R
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packages for for the analysis and comprehension of high-throughput
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@ -26,6 +26,7 @@
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#:use-module (srfi srfi-1)
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#:use-module (srfi srfi-11)
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#:use-module (srfi srfi-37)
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#:use-module (srfi srfi-41)
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#:use-module (ice-9 match)
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#:use-module (ice-9 format)
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#:export (guix-import-cran))
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@ -63,6 +64,9 @@ Import and convert the CRAN package for PACKAGE-NAME.\n"))
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(lambda (opt name arg result)
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(alist-cons 'repo (string->symbol arg)
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(alist-delete 'repo result))))
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(option '(#\r "recursive") #f #f
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(lambda (opt name arg result)
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(alist-cons 'recursive #t result)))
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%standard-import-options))
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@ -88,12 +92,22 @@ Import and convert the CRAN package for PACKAGE-NAME.\n"))
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(reverse opts))))
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(match args
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((package-name)
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(if (assoc-ref opts 'recursive)
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;; Recursive import
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(map (match-lambda
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((and ('package ('name name) . rest) pkg)
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`(define-public ,(string->symbol name)
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,pkg))
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(_ #f))
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(stream->list (recursive-import package-name
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(or (assoc-ref opts 'repo) 'cran))))
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;; Single import
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(let ((sexp (cran->guix-package package-name
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(or (assoc-ref opts 'repo) 'cran))))
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(unless sexp
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(leave (_ "failed to download description for package '~a'~%")
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package-name))
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sexp))
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sexp)))
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(()
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(leave (_ "too few arguments~%")))
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((many ...)
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