gnu: petsc: Use modify-phases.
* gnu/packages/maths.scm (petsc)[arguments]: Use modify-phases.
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@ -829,30 +829,28 @@ ASCII text files using Gmsh's own scripting language.")
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,(string-append "--with-superlu-lib="
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(assoc-ref %build-inputs "superlu") "/lib/libsuperlu.a"))
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#:phases
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(alist-replace
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'configure
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;; PETSc's configure script is actually a python script, so we can't
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;; run it with bash.
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(lambda* (#:key outputs (configure-flags '())
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#:allow-other-keys)
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(let* ((prefix (assoc-ref outputs "out"))
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(flags `(,(string-append "--prefix=" prefix)
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,@configure-flags)))
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(format #t "build directory: ~s~%" (getcwd))
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(format #t "configure flags: ~s~%" flags)
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(zero? (apply system* "./configure" flags))))
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(alist-cons-after
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'configure 'clean-local-references
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;; Try to keep build directory names from leaking into compiled code
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(lambda* (#:key inputs outputs #:allow-other-keys)
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(let ((out (assoc-ref outputs "out")))
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(substitute* (find-files "." "^petsc(conf|machineinfo).h$")
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(((getcwd)) out))))
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(alist-cons-after
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'install 'clean-install
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(modify-phases %standard-phases
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(replace 'configure
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;; PETSc's configure script is actually a python script, so we can't
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;; run it with bash.
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(lambda* (#:key outputs (configure-flags '())
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#:allow-other-keys)
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(let* ((prefix (assoc-ref outputs "out"))
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(flags `(,(string-append "--prefix=" prefix)
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,@configure-flags)))
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(format #t "build directory: ~s~%" (getcwd))
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(format #t "configure flags: ~s~%" flags)
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(zero? (apply system* "./configure" flags)))))
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(add-after 'configure 'clean-local-references
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;; Try to keep build directory names from leaking into compiled code
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(lambda* (#:key inputs outputs #:allow-other-keys)
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(let ((out (assoc-ref outputs "out")))
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(substitute* (find-files "." "^petsc(conf|machineinfo).h$")
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(((getcwd)) out)))))
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(add-after 'install 'clean-install
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;; Try to keep installed files from leaking build directory names.
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(lambda* (#:key inputs outputs #:allow-other-keys)
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(let ((out (assoc-ref outputs "out")))
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(let ((out (assoc-ref outputs "out")))
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(substitute* (map (lambda (file)
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(string-append out "/lib/petsc/conf/" file))
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'("petscvariables" "PETScConfig.cmake"))
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@ -869,8 +867,7 @@ ASCII text files using Gmsh's own scripting language.")
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'("configure.log" "make.log" "gmake.log"
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"test.log" "error.log" "RDict.db"
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;; Once installed, should uninstall with Guix
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"uninstall.py"))))
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%standard-phases)))))
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"uninstall.py"))))))))
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(home-page "http://www.mcs.anl.gov/petsc")
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(synopsis "Library to solve PDEs")
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(description "PETSc, pronounced PET-see (the S is silent), is a suite of
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