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gnu: orfm: Update to 0.5.3. 

* gnu/packages/bioinformatics.scm (orfm): Update to 0.5.3.
[native-inputs]: Add inputs required for tests.
[description]: Add commas.
This commit is contained in:
Ben Woodcroft 2015-11-21 10:37:34 +10:00
parent 3d84a99e73
commit 6b6f7d6a0e
1 changed files with 7 additions and 3 deletions
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@ -2079,7 +2079,7 @@ that a read originated from a particular isoform.")
(define-public orfm (define-public orfm
(package (package
(name "orfm") (name "orfm")
(version "0.4.1") (version "0.5.3")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append (uri (string-append
@ -2087,12 +2087,16 @@ that a read originated from a particular isoform.")
version "/orfm-" version ".tar.gz")) version "/orfm-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"05fmw145snk646ly076zby0fjav0k7ysbclck5d4s9pmgcfpijc2")))) "0vb6d771gl4mix8bwx919x5ayy9pkj44n7ki336nz3rz2rx4c7gk"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(inputs `(("zlib" ,zlib))) (inputs `(("zlib" ,zlib)))
(native-inputs
`(("ruby-bio-commandeer" ,ruby-bio-commandeer)
("ruby-rspec" ,ruby-rspec)
("ruby" ,ruby)))
(synopsis "Simple and not slow open reading frame (ORF) caller") (synopsis "Simple and not slow open reading frame (ORF) caller")
(description (description
"An ORF caller finds stretches of DNA that when translated are not "An ORF caller finds stretches of DNA that, when translated, are not
interrupted by stop codons. OrfM finds and prints these ORFs.") interrupted by stop codons. OrfM finds and prints these ORFs.")
(home-page "https://github.com/wwood/OrfM") (home-page "https://github.com/wwood/OrfM")
(license license:lgpl3+))) (license license:lgpl3+)))