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Merge branch 'master' into staging

This commit is contained in:
Marius Bakke 2019-06-29 23:23:59 +02:00
parent c24b896365 8e92d5465f
commit 6e1f8d552b
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113 changed files with 3795 additions and 1104 deletions
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3
Makefile.am
View File

@ -489,9 +489,8 @@ check-system: $(GOBJECTS)
-e '(@@ (run-system-tests) run-system-tests)' \ -e '(@@ (run-system-tests) run-system-tests)' \
$(top_srcdir)/build-aux/run-system-tests.scm $(top_srcdir)/build-aux/run-system-tests.scm
# Public key used to sign substitutes from hydra.gnu.org & co. # Public keys used to sign substitutes.
dist_pkgdata_DATA = \ dist_pkgdata_DATA = \
etc/substitutes/hydra.gnu.org.pub \
etc/substitutes/berlin.guixsd.org.pub \ etc/substitutes/berlin.guixsd.org.pub \
etc/substitutes/ci.guix.gnu.org.pub \ etc/substitutes/ci.guix.gnu.org.pub \
etc/substitutes/ci.guix.info.pub etc/substitutes/ci.guix.info.pub

27
build-aux/compile-all.scm
View File

@ -91,6 +91,8 @@ to 'make'."
(match (command-line) (match (command-line)
((_ . files) ((_ . files)
(catch #t
(lambda ()
(compile-files srcdir (getcwd) (compile-files srcdir (getcwd)
(filter file-needs-compilation? files) (filter file-needs-compilation? files)
#:workers (parallel-job-count) #:workers (parallel-job-count)
@ -107,4 +109,27 @@ to 'make'."
(% (+ total completed 1) (% (+ total completed 1)
(* 2 total)) (* 2 total))
(scm->go file)) (scm->go file))
(force-output)))))) (force-output)))))
(lambda _
(primitive-exit 1))
(lambda args
;; Try to report the error in an intelligible way.
(let* ((stack (make-stack #t))
(frame (if (> (stack-length stack) 1)
(stack-ref stack 1) ;skip the 'throw' frame
(stack-ref stack 0)))
(ui (false-if-exception
(resolve-module '(guix ui))))
(report (and ui
(false-if-exception
(module-ref ui 'report-load-error)))))
(if report
;; In Guile <= 2.2.5, 'current-load-port' was not exported.
(let ((load-port ((module-ref (resolve-module '(ice-9 ports))
'current-load-port))))
(report (or (and=> load-port port-filename) "?.scm")
args frame))
(begin
(print-exception (current-error-port) frame
(car args) (cdr args))
(display-backtrace stack (current-error-port)))))))))

5
doc/contributing.texi
View File

@ -281,8 +281,7 @@ Once your package builds correctly, please send us a patch
(@pxref{Submitting Patches}). Well, if you need help, we will be happy to (@pxref{Submitting Patches}). Well, if you need help, we will be happy to
help you too. Once the patch is committed in the Guix repository, the help you too. Once the patch is committed in the Guix repository, the
new package automatically gets built on the supported platforms by new package automatically gets built on the supported platforms by
@url{http://hydra.gnu.org/jobset/gnu/master, our continuous integration @url{@value{SUBSTITUTE-SERVER}, our continuous integration system}.
system}.
@cindex substituter @cindex substituter
Users can obtain the new package definition simply by running Users can obtain the new package definition simply by running
@ -893,7 +892,7 @@ changes). This branch is intended to be merged in @code{master} every
2.5 months or so. 2.5 months or so.
@end table @end table
All these branches are @uref{https://hydra.gnu.org/project/gnu, All these branches are @uref{@value{SUBSTITUTE-SERVER},
tracked by our build farm} and merged into @code{master} once tracked by our build farm} and merged into @code{master} once
everything has been successfully built. This allows us to fix issues everything has been successfully built. This allows us to fix issues
before they hit users, and to reduce the window during which pre-built before they hit users, and to reduce the window during which pre-built

43
doc/guix.texi
View File

@ -2430,13 +2430,14 @@ The resulting file will be much smaller than 50 GB (typically less than
Boot the USB installation image in an VM: Boot the USB installation image in an VM:
@example @example
qemu-system-x86_64 -m 1024 -smp 1 \ qemu-system-x86_64 -m 1024 -smp 1 -enable-kvm \
-net user -net nic,model=virtio -boot menu=on \ -net user -net nic,model=virtio -boot menu=on \
-drive file=guix-system-install-@value{VERSION}.@var{system}.iso \ -drive file=guix-system-install-@value{VERSION}.@var{system}.iso \
-drive file=guixsd.img -drive file=guixsd.img
@end example @end example
The ordering of the drives matters. The ordering of the drives matters. @code{-enable-kvm} is optional, but
significantly improves performance, @pxref{Running Guix in a VM}.
In the VM console, quickly press the @kbd{F12} key to enter the boot In the VM console, quickly press the @kbd{F12} key to enter the boot
menu. Then press the @kbd{2} key and the @kbd{RET} key to validate your menu. Then press the @kbd{2} key and the @kbd{RET} key to validate your
@ -3133,7 +3134,6 @@ also result from derivation builds, can be available as substitutes.
@node Official Substitute Server @node Official Substitute Server
@subsection Official Substitute Server @subsection Official Substitute Server
@cindex hydra
@cindex build farm @cindex build farm
The @code{@value{SUBSTITUTE-SERVER}} server is a front-end to an official build farm The @code{@value{SUBSTITUTE-SERVER}} server is a front-end to an official build farm
that builds packages from Guix continuously for some that builds packages from Guix continuously for some
@ -3185,12 +3185,6 @@ Then, you can run something like this:
# guix archive --authorize < @var{prefix}/share/guix/@value{SUBSTITUTE-SERVER}.pub # guix archive --authorize < @var{prefix}/share/guix/@value{SUBSTITUTE-SERVER}.pub
@end example @end example
@quotation Note
Similarly, the @file{hydra.gnu.org.pub} file contains the public key
of an independent build farm also run by the project, reachable at
@indicateurl{https://mirror.hydra.gnu.org}.
@end quotation
Once this is in place, the output of a command like @code{guix build} Once this is in place, the output of a command like @code{guix build}
should change from something like: should change from something like:
@ -9610,7 +9604,7 @@ their store with others, who can then use it as a substitute server
When @command{guix publish} runs, it spawns an HTTP server which allows When @command{guix publish} runs, it spawns an HTTP server which allows
anyone with network access to obtain substitutes from it. This means anyone with network access to obtain substitutes from it. This means
that any machine running Guix can also act as if it were a build farm, that any machine running Guix can also act as if it were a build farm,
since the HTTP interface is compatible with Hydra, the software behind since the HTTP interface is compatible with Cuirass, the software behind
the @code{@value{SUBSTITUTE-SERVER}} build farm. the @code{@value{SUBSTITUTE-SERVER}} build farm.
For security, each substitute is signed, allowing recipients to check For security, each substitute is signed, allowing recipients to check
@ -12735,10 +12729,35 @@ NetworkManager will update @code{resolv.conf} to reflect the nameservers
provided by currently active connections. provided by currently active connections.
@item dnsmasq @item dnsmasq
NetworkManager will run @code{dnsmasq} as a local caching nameserver, NetworkManager will run @code{dnsmasq} as a local caching nameserver, using a
using a "split DNS" configuration if you are connected to a VPN, and @dfn{conditional forwarding} configuration if you are connected to a VPN, and
then update @code{resolv.conf} to point to the local nameserver. then update @code{resolv.conf} to point to the local nameserver.
With this setting, you can share your network connection. For example when
you want to share your network connection to another laptop @i{via} an
Ethernet cable, you can open @command{nm-connection-editor} and configure the
Wired connection's method for IPv4 and IPv6 to be ``Shared to other computers''
and reestablish the connection (or reboot).
You can also set up a @dfn{host-to-guest connection} to QEMU VMs
(@pxref{Installing Guix in a VM}). With a host-to-guest connection, you can
e.g.@: access a Web server running on the VM (@pxref{Web Services}) from a Web
browser on your host system, or connect to the VM @i{via} SSH
(@pxref{Networking Services, @code{openssh-service-type}}). To set up a
host-to-guest connection, run this command once:
@example
nmcli connection add type tun \
connection.interface-name tap0 \
tun.mode tap tun.owner $(id -u) \
ipv4.method shared \
ipv4.addresses 172.28.112.1/24
@end example
Then each time you launch your QEMU VM (@pxref{Running Guix in a VM}), pass
@option{-nic tap,ifname=tap0,script=no,downscript=no} to
@command{qemu-system-...}.
@item none @item none
NetworkManager will not modify @code{resolv.conf}. NetworkManager will not modify @code{resolv.conf}.
@end table @end table

8
etc/guix-install.sh
View File

@ -362,13 +362,11 @@ sys_enable_guix_daemon()
} }
sys_authorize_build_farms() sys_authorize_build_farms()
{ # authorize the public keys of the two build farms { # authorize the public key of the build farm
while true; do while true; do
read -p "Permit downloading pre-built package binaries from the project's build farms? (yes/no) " yn read -p "Permit downloading pre-built package binaries from the project's build farm? (yes/no) " yn
case $yn in case $yn in
[Yy]*) guix archive --authorize < "${ROOT_HOME}/.config/guix/current/share/guix/hydra.gnu.org.pub" && [Yy]*) guix archive --authorize < "${ROOT_HOME}/.config/guix/current/share/guix/ci.guix.gnu.org.pub" &&
_msg "${PAS}Authorized public key for hydra.gnu.org";
guix archive --authorize < "${ROOT_HOME}/.config/guix/current/share/guix/ci.guix.gnu.org.pub" &&
_msg "${PAS}Authorized public key for ci.guix.gnu.org"; _msg "${PAS}Authorized public key for ci.guix.gnu.org";
break;; break;;
[Nn]*) _msg "${INF}Skipped authorizing build farm public keys" [Nn]*) _msg "${INF}Skipped authorizing build farm public keys"

6
etc/substitutes/hydra.gnu.org.pub
View File

@ -1,6 +0,0 @@
(public-key
(rsa
(n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
(e #010001#)
)
)

14
gnu/build/accounts.scm
View File

@ -19,7 +19,6 @@
(define-module (gnu build accounts) (define-module (gnu build accounts)
#:use-module (guix records) #:use-module (guix records)
#:use-module (guix combinators) #:use-module (guix combinators)
#:use-module ((guix build syscalls) #:select (fdatasync))
#:use-module (gnu system accounts) #:use-module (gnu system accounts)
#:use-module (srfi srfi-1) #:use-module (srfi srfi-1)
#:use-module (srfi srfi-11) #:use-module (srfi srfi-11)
@ -231,14 +230,6 @@ each field."
;; grab this lock with 'with-file-lock' when they access the databases. ;; grab this lock with 'with-file-lock' when they access the databases.
"/etc/.pwd.lock") "/etc/.pwd.lock")
(define-syntax-rule (catch-ENOSYS exp)
(catch 'system-error
(lambda () exp)
(lambda args
(if (= ENOSYS (system-error-errno args))
#f
(apply throw args)))))
(define (database-writer file mode entry->string) (define (database-writer file mode entry->string)
(lambda* (entries #:optional (file-or-port file)) (lambda* (entries #:optional (file-or-port file))
"Write ENTRIES to FILE-OR-PORT. When FILE-OR-PORT is a file name, write "Write ENTRIES to FILE-OR-PORT. When FILE-OR-PORT is a file name, write
@ -259,10 +250,7 @@ to it atomically and set the appropriate permissions."
(chmod port mode) (chmod port mode)
(write-entries port) (write-entries port)
;; XXX: When booting with the statically-linked Guile, (fsync port)
;; 'fdatasync' is unavailable.
(catch-ENOSYS (fdatasync port))
(close-port port) (close-port port)
(rename-file template file-or-port)) (rename-file template file-or-port))
(lambda () (lambda ()

16
gnu/build/linux-container.scm
View File

@ -22,7 +22,6 @@
#:use-module (ice-9 match) #:use-module (ice-9 match)
#:use-module (ice-9 rdelim) #:use-module (ice-9 rdelim)
#:use-module (srfi srfi-98) #:use-module (srfi srfi-98)
#:use-module (guix utils)
#:use-module (guix build utils) #:use-module (guix build utils)
#:use-module (guix build syscalls) #:use-module (guix build syscalls)
#:use-module (gnu system file-systems) ;<file-system> #:use-module (gnu system file-systems) ;<file-system>
@ -279,6 +278,21 @@ that host UIDs (respectively GIDs) map to in the namespace."
(_ ;unexpected termination (_ ;unexpected termination
#f))))))))) #f)))))))))
;; FIXME: This is copied from (guix utils), which we cannot use because it
;; would pull (guix config) and all.
(define (call-with-temporary-directory proc)
"Call PROC with a name of a temporary directory; close the directory and
delete it when leaving the dynamic extent of this call."
(let* ((directory (or (getenv "TMPDIR") "/tmp"))
(template (string-append directory "/guix-directory.XXXXXX"))
(tmp-dir (mkdtemp! template)))
(dynamic-wind
(const #t)
(lambda ()
(proc tmp-dir))
(lambda ()
(false-if-exception (delete-file-recursively tmp-dir))))))
(define* (call-with-container mounts thunk #:key (namespaces %namespaces) (define* (call-with-container mounts thunk #:key (namespaces %namespaces)
(host-uids 1) (guest-uid 0) (guest-gid 0)) (host-uids 1) (guest-uid 0) (guest-gid 0))
"Run THUNK in a new container process and return its exit status. "Run THUNK in a new container process and return its exit status.

12
gnu/local.mk
View File

@ -20,6 +20,7 @@
# Copyright © 2018, 2019 Oleg Pykhalov <go.wigust@gmail.com> # Copyright © 2018, 2019 Oleg Pykhalov <go.wigust@gmail.com>
# Copyright © 2018 Stefan Stefanović <stefanx2ovic@gmail.com> # Copyright © 2018 Stefan Stefanović <stefanx2ovic@gmail.com>
# Copyright © 2018 Maxim Cournoyer <maxim.cournoyer@gmail.com> # Copyright © 2018 Maxim Cournoyer <maxim.cournoyer@gmail.com>
# Copyright © 2019 Guillaume Le Vaillant <glv@posteo.net>
# #
# This file is part of GNU Guix. # This file is part of GNU Guix.
# #
@ -195,6 +196,7 @@ GNU_SYSTEM_MODULES = \
%D%/packages/gcc.scm \ %D%/packages/gcc.scm \
%D%/packages/gd.scm \ %D%/packages/gd.scm \
%D%/packages/gdb.scm \ %D%/packages/gdb.scm \
%D%/packages/genealogy.scm \
%D%/packages/genimage.scm \ %D%/packages/genimage.scm \
%D%/packages/geo.scm \ %D%/packages/geo.scm \
%D%/packages/gettext.scm \ %D%/packages/gettext.scm \
@ -899,6 +901,7 @@ dist_patch_DATA = \
%D%/packages/patches/guile-relocatable.patch \ %D%/packages/patches/guile-relocatable.patch \
%D%/packages/patches/guile-rsvg-pkgconfig.patch \ %D%/packages/patches/guile-rsvg-pkgconfig.patch \
%D%/packages/patches/guile-emacs-fix-configure.patch \ %D%/packages/patches/guile-emacs-fix-configure.patch \
%D%/packages/patches/gstreamer-buffer-reset-offset.patch \
%D%/packages/patches/gtk2-respect-GUIX_GTK2_PATH.patch \ %D%/packages/patches/gtk2-respect-GUIX_GTK2_PATH.patch \
%D%/packages/patches/gtk2-respect-GUIX_GTK2_IM_MODULE_FILE.patch \ %D%/packages/patches/gtk2-respect-GUIX_GTK2_IM_MODULE_FILE.patch \
%D%/packages/patches/gtk2-theme-paths.patch \ %D%/packages/patches/gtk2-theme-paths.patch \
@ -951,7 +954,6 @@ dist_patch_DATA = \
%D%/packages/patches/java-xerces-xjavac_taskdef.patch \ %D%/packages/patches/java-xerces-xjavac_taskdef.patch \
%D%/packages/patches/jbig2dec-ignore-testtest.patch \ %D%/packages/patches/jbig2dec-ignore-testtest.patch \
%D%/packages/patches/kdbusaddons-kinit-file-name.patch \ %D%/packages/patches/kdbusaddons-kinit-file-name.patch \
%D%/packages/patches/khmer-use-libraries.patch \
%D%/packages/patches/libziparchive-add-includes.patch \ %D%/packages/patches/libziparchive-add-includes.patch \
%D%/packages/patches/localed-xorg-keyboard.patch \ %D%/packages/patches/localed-xorg-keyboard.patch \
%D%/packages/patches/kiki-level-selection-crash.patch \ %D%/packages/patches/kiki-level-selection-crash.patch \
@ -973,9 +975,14 @@ dist_patch_DATA = \
%D%/packages/patches/kodi-set-libcurl-ssl-parameters.patch \ %D%/packages/patches/kodi-set-libcurl-ssl-parameters.patch \
%D%/packages/patches/kodi-skip-test-449.patch \ %D%/packages/patches/kodi-skip-test-449.patch \
%D%/packages/patches/laby-make-install.patch \ %D%/packages/patches/laby-make-install.patch \
%D%/packages/patches/lcalc-default-parameters-1.patch \
%D%/packages/patches/lcalc-default-parameters-2.patch \
%D%/packages/patches/lcalc-lcommon-h.patch \
%D%/packages/patches/lcalc-using-namespace-std.patch \
%D%/packages/patches/lcms-CVE-2018-16435.patch \ %D%/packages/patches/lcms-CVE-2018-16435.patch \
%D%/packages/patches/ldc-bootstrap-disable-tests.patch \ %D%/packages/patches/ldc-bootstrap-disable-tests.patch \
%D%/packages/patches/ldc-disable-phobos-tests.patch \ %D%/packages/patches/ldc-disable-phobos-tests.patch \
%D%/packages/patches/leela-zero-gtest.patch \
%D%/packages/patches/liba52-enable-pic.patch \ %D%/packages/patches/liba52-enable-pic.patch \
%D%/packages/patches/liba52-link-with-libm.patch \ %D%/packages/patches/liba52-link-with-libm.patch \
%D%/packages/patches/liba52-set-soname.patch \ %D%/packages/patches/liba52-set-soname.patch \
@ -1044,6 +1051,7 @@ dist_patch_DATA = \
%D%/packages/patches/llvm-3.5-fix-clang-build-with-gcc5.patch \ %D%/packages/patches/llvm-3.5-fix-clang-build-with-gcc5.patch \
%D%/packages/patches/llvm-for-extempore.patch \ %D%/packages/patches/llvm-for-extempore.patch \
%D%/packages/patches/lm-sensors-hwmon-attrs.patch \ %D%/packages/patches/lm-sensors-hwmon-attrs.patch \
%D%/packages/patches/lrcalc-includes.patch \
%D%/packages/patches/lrzip-CVE-2017-8842.patch \ %D%/packages/patches/lrzip-CVE-2017-8842.patch \
%D%/packages/patches/lua-CVE-2014-5461.patch \ %D%/packages/patches/lua-CVE-2014-5461.patch \
%D%/packages/patches/lua-pkgconfig.patch \ %D%/packages/patches/lua-pkgconfig.patch \
@ -1214,6 +1222,7 @@ dist_patch_DATA = \
%D%/packages/patches/python-mox3-python3.6-compat.patch \ %D%/packages/patches/python-mox3-python3.6-compat.patch \
%D%/packages/patches/python-testtools.patch \ %D%/packages/patches/python-testtools.patch \
%D%/packages/patches/python-paste-remove-timing-test.patch \ %D%/packages/patches/python-paste-remove-timing-test.patch \
%D%/packages/patches/python-pyatspi-python-37.patch \
%D%/packages/patches/python-pycrypto-CVE-2013-7459.patch \ %D%/packages/patches/python-pycrypto-CVE-2013-7459.patch \
%D%/packages/patches/python2-pygobject-2-gi-info-type-error-domain.patch \ %D%/packages/patches/python2-pygobject-2-gi-info-type-error-domain.patch \
%D%/packages/patches/python-pygpgme-fix-pinentry-tests.patch \ %D%/packages/patches/python-pygpgme-fix-pinentry-tests.patch \
@ -1259,7 +1268,6 @@ dist_patch_DATA = \
%D%/packages/patches/rust-1.25-accept-more-detailed-gdb-lines.patch \ %D%/packages/patches/rust-1.25-accept-more-detailed-gdb-lines.patch \
%D%/packages/patches/rust-bootstrap-stage0-test.patch \ %D%/packages/patches/rust-bootstrap-stage0-test.patch \
%D%/packages/patches/rust-coresimd-doctest.patch \ %D%/packages/patches/rust-coresimd-doctest.patch \
%D%/packages/patches/rust-1.30-gdb-llvm.patch \
%D%/packages/patches/rust-reproducible-builds.patch \ %D%/packages/patches/rust-reproducible-builds.patch \
%D%/packages/patches/rxvt-unicode-escape-sequences.patch \ %D%/packages/patches/rxvt-unicode-escape-sequences.patch \
%D%/packages/patches/scalapack-blacs-mpi-deprecations.patch \ %D%/packages/patches/scalapack-blacs-mpi-deprecations.patch \

8
gnu/packages.scm
View File

@ -534,14 +534,18 @@ optionally contain a version number and an output name, as in these examples:
guile@2.0.9:debug guile@2.0.9:debug
If SPEC does not specify a version number, return the preferred newest If SPEC does not specify a version number, return the preferred newest
version; if SPEC does not specify an output, return OUTPUT." version; if SPEC does not specify an output, return OUTPUT.
When OUTPUT is false and SPEC does not specify any output, return #f as the
output."
(let-values (((name version sub-drv) (let-values (((name version sub-drv)
(package-specification->name+version+output spec output))) (package-specification->name+version+output spec output)))
(match (%find-package spec name version) (match (%find-package spec name version)
(#f (#f
(values #f #f)) (values #f #f))
(package (package
(if (member sub-drv (package-outputs package)) (if (or (and (not output) (not sub-drv))
(member sub-drv (package-outputs package)))
(values package sub-drv) (values package sub-drv)
(leave (G_ "package `~a' lacks output `~a'~%") (leave (G_ "package `~a' lacks output `~a'~%")
(package-full-name package) (package-full-name package)

12
gnu/packages/admin.scm
View File

@ -2220,19 +2220,19 @@ a new command using the matched rule, and runs it.")
(define-public di (define-public di
(package (package
(name "di") (name "di")
(version "4.47") (version "4.47.1")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://gentoo.com/di/di-" version ".tar.gz")) (uri (string-append "https://gentoo.com/di/di-" version ".tar.gz"))
(sha256 (sha256
(base32 "0zlapxlzjizwzwa8xwrwibhcbkh0wx7n74gvjpp6wlwq7cgiq0xm")))) (base32 "1bdbl9k3gqf4h6g21difqc0w17pjid6r587y19wi37vx36aava7f"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:tests? #f ; obscure test failures. `(#:tests? #f ; obscure test failures
#:phases #:phases
(modify-phases %standard-phases (modify-phases %standard-phases
(delete 'configure) (delete 'configure) ; no configure script
(add-before 'build 'setup-environment (add-before 'build 'setup-environment
(lambda* (#:key outputs #:allow-other-keys) (lambda* (#:key outputs #:allow-other-keys)
(setenv "CC" "gcc") (setenv "CC" "gcc")
@ -2251,7 +2251,7 @@ produce uniform output across heterogeneous networks.")
(define-public cbatticon (define-public cbatticon
(package (package
(name "cbatticon") (name "cbatticon")
(version "1.6.8") (version "1.6.9")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
@ -2259,7 +2259,7 @@ produce uniform output across heterogeneous networks.")
(url "https://github.com/valr/cbatticon.git") (url "https://github.com/valr/cbatticon.git")
(commit version))) (commit version)))
(sha256 (sha256
(base32 "16g26vin1693dbdr9qsnw36fdchx394lp79gvp7gcbw0w1ny9av6")) (base32 "0kw09d678sd3m18fmi4380sl4a2m5lkfmq0kps16cdmq7z80rvaf"))
(file-name (git-file-name name version)))) (file-name (git-file-name name version))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments

47
gnu/packages/algebra.scm
View File

@ -1333,47 +1333,6 @@ multiplication algorithm.")
(license license:gpl2+) (license license:gpl2+)
(home-page "https://bitbucket.org/malb/m4ri/"))) (home-page "https://bitbucket.org/malb/m4ri/")))
(define-public ratpoints
(package
(name "ratpoints")
(version "2.1.3")
(source (origin
(method url-fetch)
(uri (string-append
"http://www.mathe2.uni-bayreuth.de/stoll/programs/"
"ratpoints-" version ".tar.gz"))
(sha256
(base32
"0zhad84sfds7izyksbqjmwpfw4rvyqk63yzdjd3ysd32zss5bgf4"))
(patches
;; Taken from
;; <https://git.sagemath.org/sage.git/plain/build/pkgs/ratpoints/patches/>
(search-patches "ratpoints-sturm_and_rp_private.patch"))))
(build-system gnu-build-system)
(arguments
`(#:test-target "test"
#:make-flags
(list (string-append "INSTALL_DIR=" (assoc-ref %outputs "out")))
#:phases
(modify-phases %standard-phases
(delete 'configure) ;no configure script
(add-before 'install 'create-install-directories
(lambda* (#:key outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out")))
(mkdir-p out)
(with-directory-excursion out
(for-each (lambda (d) (mkdir-p d))
'("bin" "include" "lib"))))
#t)))))
(inputs
`(("gmp" ,gmp)))
(home-page "http://www.mathe2.uni-bayreuth.de/stoll/programs/")
(synopsis "Find rational points on hyperelliptic curves")
(description "Ratpoints tries to find all rational points within
a given height bound on a hyperelliptic curve in a very efficient way,
by using an optimized quadratic sieve algorithm.")
(license license:gpl2+)))
(define-public symmetrica (define-public symmetrica
(package (package
(name "symmetrica") (name "symmetrica")
@ -1400,7 +1359,7 @@ by using an optimized quadratic sieve algorithm.")
(add-after 'unpack 'fix-makefile (add-after 'unpack 'fix-makefile
(lambda _ (lambda _
(substitute* "makefile" (substitute* "makefile"
(("cc -c") "gcc -c")) (("cc -c") "gcc -c -fPIC"))
#t)) #t))
(add-after 'fix-makefile 'turn-off-banner (add-after 'fix-makefile 'turn-off-banner
(lambda _ (lambda _
@ -1503,7 +1462,8 @@ John Cremona to compute his elliptic curve database.")
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"1c12d04jdyxkkav4ak8d1aqrv594gzihwhpxvc6p9js0ry1fahss")))) "1c12d04jdyxkkav4ak8d1aqrv594gzihwhpxvc6p9js0ry1fahss"))
(patches (search-patches "lrcalc-includes.patch"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(native-inputs (native-inputs
`(("autoconf" ,autoconf) `(("autoconf" ,autoconf)
@ -1547,6 +1507,7 @@ structure constants of Schubert polynomials.")
(arguments (arguments
`(#:configure-flags `(#:configure-flags
(list (list
"--enable-shared"
(string-append "--with-gmp-include=" (string-append "--with-gmp-include="
(assoc-ref %build-inputs "gmp") "/include") (assoc-ref %build-inputs "gmp") "/include")
(string-append "--with-gmp-lib=" (string-append "--with-gmp-lib="

12
gnu/packages/android.scm
View File

@ -8,6 +8,7 @@
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2018 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2019 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2019 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2019 Ricardo Wurmus <rekado@elephly.net>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -90,6 +91,17 @@ use their packages mostly unmodified in our Android NDK build system.")
(define-public android-googletest (define-public android-googletest
(package (inherit googletest) (package (inherit googletest)
(name "android-googletest") (name "android-googletest")
(version "1.8.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/google/googletest.git")
(commit (string-append "release-" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0bjlljmbf8glnd9qjabx73w6pd7ibv43yiyngqvmvgxsabzr8399"))))
(arguments (arguments
`(#:configure-flags '("-DBUILD_SHARED_LIBS=ON") `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON")
#:phases #:phases

8
gnu/packages/apl.scm
View File

@ -1,7 +1,7 @@
;;; GNU Guix --- Functional package management for GNU ;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2013 Nikita Karetnikov <nikita@karetnikov.org> ;;; Copyright © 2013 Nikita Karetnikov <nikita@karetnikov.org>
;;; Copyright © 2014, 2015 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2014, 2015 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2017, 2019 Efraim Flashner <efraim@flashner.co.il>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -25,25 +25,27 @@
#:use-module (guix build-system gnu) #:use-module (guix build-system gnu)
#:use-module (gnu packages gettext) #:use-module (gnu packages gettext)
#:use-module (gnu packages maths) #:use-module (gnu packages maths)
#:use-module (gnu packages pcre)
#:use-module (gnu packages readline) #:use-module (gnu packages readline)
#:use-module (gnu packages sqlite)) #:use-module (gnu packages sqlite))
(define-public apl (define-public apl
(package (package
(name "apl") (name "apl")
(version "1.7") (version "1.8")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (string-append "mirror://gnu/apl/apl-" version ".tar.gz")) (uri (string-append "mirror://gnu/apl/apl-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"07xq8ddlmz8psvsmwr23gar108ri0lwmw0n6kpxcv8ypas1f5xlg")))) "1jxvv2h3y1am1fw6r5sn3say1n0dj8shmscbybl0qhqdia2lqkql"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(home-page "https://www.gnu.org/software/apl/") (home-page "https://www.gnu.org/software/apl/")
(inputs (inputs
`(("gettext" ,gettext-minimal) `(("gettext" ,gettext-minimal)
("lapack" ,lapack) ("lapack" ,lapack)
("pcre" ,pcre2)
("sqlite" ,sqlite) ("sqlite" ,sqlite)
("readline" ,readline))) ("readline" ,readline)))
(arguments (arguments

87
gnu/packages/astronomy.scm
View File

@ -2,6 +2,7 @@
;;; Copyright © 2016 John Darrington <jmd@gnu.org> ;;; Copyright © 2016 John Darrington <jmd@gnu.org>
;;; Copyright © 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018, 2019 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2018, 2019 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2019 by Amar Singh <nly@disroot.org>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -22,17 +23,27 @@
#:use-module (guix packages) #:use-module (guix packages)
#:use-module ((guix licenses) #:prefix license:) #:use-module ((guix licenses) #:prefix license:)
#:use-module (guix download) #:use-module (guix download)
#:use-module (guix git-download)
#:use-module (guix utils) #:use-module (guix utils)
#:use-module (gnu packages autotools) #:use-module (gnu packages autotools)
#:use-module (gnu packages image) #:use-module (gnu packages image)
#:use-module (gnu packages compression) #:use-module (gnu packages compression)
#:use-module (gnu packages gettext) #:use-module (gnu packages gettext)
#:use-module (gnu packages version-control)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages xiph)
#:use-module (gnu packages pretty-print)
#:use-module (gnu packages algebra)
#:use-module (gnu packages lua)
#:use-module (gnu packages perl) #:use-module (gnu packages perl)
#:use-module (gnu packages gl) #:use-module (gnu packages gl)
#:use-module (gnu packages qt) #:use-module (gnu packages qt)
#:use-module (gnu packages gtk)
#:use-module (gnu packages gnome)
#:use-module (gnu packages maths) #:use-module (gnu packages maths)
#:use-module (guix build-system cmake) #:use-module (guix build-system cmake)
#:use-module (guix build-system gnu)) #:use-module (guix build-system gnu)
#:use-module (srfi srfi-1))
(define-public cfitsio (define-public cfitsio
(package (package
@ -133,15 +144,15 @@ programs for the manipulation and analysis of astronomical data.")
(define-public stellarium (define-public stellarium
(package (package
(name "stellarium") (name "stellarium")
(version "0.19.0") (version "0.19.1")
(source (origin (source
(origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://github.com/Stellarium/" name (uri (string-append "https://github.com/Stellarium/stellarium"
"/releases/download/v" version "/releases/download/v" version
"/" name "-" version ".tar.gz")) "/stellarium-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32 "0s7v5iyhah258k83kvy2a91a3mdf34r150lcar4mmdsrrcmas98g"))))
"1mjjqcpgm5a1022x0mpqj3v6qkvpm9wqm1hqyg0mlypc5681va8a"))))
(build-system cmake-build-system) (build-system cmake-build-system)
(inputs (inputs
`(("qtbase" ,qtbase) `(("qtbase" ,qtbase)
@ -176,3 +187,65 @@ programs for the manipulation and analysis of astronomical data.")
can be used to control telescopes over a serial port for tracking celestial can be used to control telescopes over a serial port for tracking celestial
objects.") objects.")
(license license:gpl2+))) (license license:gpl2+)))
(define-public celestia
(let ((commit "9dbdf29c4ac3d20afb2d9a80d3dff241ecf81dce"))
(package
(name "celestia")
(version (git-version "1.6.1" "815" commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/celestiaproject/celestia")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"00xibg87l1arzifakgj7s828x9pszcgx7x7ij88a561ig49ryh78"))))
(build-system cmake-build-system)
(native-inputs
`(("perl" ,perl)
("libgit2" ,libgit2)
("pkg-config" ,pkg-config)
("libtool" ,libtool)
("gettext" ,gettext-minimal)))
(inputs
`(("glu" ,glu)
("glew" ,glew)
("libtheora" ,libtheora)
("libjpeg" ,libjpeg)
("libpng" ,libpng)
;; maybe required?
("mesa" ,mesa)
;; optional: fmtlib, Eigen3;
("fmt" ,fmt)
("eigen" ,eigen)
;; glut: for glut interface
("freeglut" ,freeglut)))
(propagated-inputs
`(("lua" ,lua)))
(arguments
`(#:configure-flags '("-DENABLE_GLUT=ON" "-DENABLE_QT=OFF")
#:tests? #f)) ;no tests
(home-page "https://celestia.space/")
(synopsis "Real-time 3D visualization of space")
(description
"This simulation program lets you explore our universe in three
dimensions. Celestia simulates many different types of celestial objects.
From planets and moons to star clusters and galaxies, you can visit every
object in the expandable database and view it from any point in space and
time. The position and movement of solar system objects is calculated
accurately in real time at any rate desired.")
(license license:gpl2+))))
(define-public celestia-gtk
(package
(inherit celestia)
(name "celestia-gtk")
(inputs
(append (alist-delete "freeglut" (package-inputs celestia))
`(("gtk2" ,gtk+-2)
("gtkglext" ,gtkglext))))
(arguments
`(#:configure-flags '("-DENABLE_GTK=ON" "-DENABLE_QT=OFF")
#:tests? #f))))

8
gnu/packages/bash.scm
View File

@ -4,6 +4,7 @@
;;; Copyright © 2015, 2017 Leo Famulari <leo@famulari.name> ;;; Copyright © 2015, 2017 Leo Famulari <leo@famulari.name>
;;; Copyright © 2016, 2017, 2018 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016, 2017, 2018 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 Mathieu Othacehe <m.othacehe@gmail.com>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -291,13 +292,16 @@ without modification.")
`(#:phases (modify-phases %standard-phases `(#:phases (modify-phases %standard-phases
(add-after (add-after
'install 'remove-redundant-completions 'install 'remove-redundant-completions
(lambda* (#:key inputs outputs #:allow-other-keys) (lambda* (#:key
inputs native-inputs
outputs #:allow-other-keys)
;; Util-linux comes with a bunch of completion files for ;; Util-linux comes with a bunch of completion files for
;; its own commands which are more sophisticated and ;; its own commands which are more sophisticated and
;; up-to-date than those of bash-completion. Remove those ;; up-to-date than those of bash-completion. Remove those
;; from bash-completion. ;; from bash-completion.
(let* ((out (assoc-ref outputs "out")) (let* ((out (assoc-ref outputs "out"))
(util-linux (assoc-ref inputs "util-linux")) (util-linux (assoc-ref (or native-inputs inputs)
"util-linux"))
(completions (string-append out (completions (string-append out
"/share/bash-completion" "/share/bash-completion"
"/completions")) "/completions"))

32
gnu/packages/bioconductor.scm
View File

@ -2915,14 +2915,14 @@ to multiple hypothesis correction.")
(define-public r-dose (define-public r-dose
(package (package
(name "r-dose") (name "r-dose")
(version "3.10.1") (version "3.10.2")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "DOSE" version)) (uri (bioconductor-uri "DOSE" version))
(sha256 (sha256
(base32 (base32
"0ab7mgj42fg6608qkciyqivr1n8s8r5ibvp0z3jfclrnyx6cl0w1")))) "06jm1mnfd92s84f21562vsmj6jfkravfqf4lcxx2lk7s4ll66znj"))))
(properties `((upstream-name . "DOSE"))) (properties `((upstream-name . "DOSE")))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
@ -3406,14 +3406,14 @@ type and symbol colors.")
(define-public r-genomicscores (define-public r-genomicscores
(package (package
(name "r-genomicscores") (name "r-genomicscores")
(version "1.8.0") (version "1.8.1")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "GenomicScores" version)) (uri (bioconductor-uri "GenomicScores" version))
(sha256 (sha256
(base32 (base32
"17bd61icfycc61b5dij1968h026w7vfd9miwdcbppak1j6s08idq")))) "0xgv5h6hwr4p2p05z8vzhivy97gfirm4rj1ihb5c8fhgc5vp85dy"))))
(properties `((upstream-name . "GenomicScores"))) (properties `((upstream-name . "GenomicScores")))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
@ -4745,3 +4745,27 @@ enhancers. The annotatr package provides an easy way to summarize and
visualize the intersection of genomic sites/regions with genomic visualize the intersection of genomic sites/regions with genomic
annotations.") annotations.")
(license license:gpl3))) (license license:gpl3)))
(define-public r-rsubread
(package
(name "r-rsubread")
(version "1.34.4")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "Rsubread" version))
(sha256
(base32
"1230p8nsakifmpsqfiaj8rpm7npa8ab903mfjmayfa71n6yzvcbs"))))
(properties `((upstream-name . "Rsubread")))
(build-system r-build-system)
(inputs `(("zlib" ,zlib)))
(home-page "https://bioconductor.org/packages/Rsubread/")
(synopsis "Subread sequence alignment and counting for R")
(description
"This package provides tools for alignment, quantification and analysis
of second and third generation sequencing data. It includes functionality for
read mapping, read counting, SNP calling, structural variant detection and
gene fusion discovery. It can be applied to all major sequencing techologies
and to both short and long sequence reads.")
(license license:gpl3)))

44
gnu/packages/bioinformatics.scm
View File

@ -4168,7 +4168,7 @@ command, or queried for specific k-mers with @code{jellyfish query}.")
(define-public khmer (define-public khmer
(package (package
(name "khmer") (name "khmer")
(version "2.1.2") (version "3.0.0a3")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
@ -4178,8 +4178,7 @@ command, or queried for specific k-mers with @code{jellyfish query}.")
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"02x38d9jw2r58y8dmnj4hffy9wxv1yc1jwbvdbhby9dxndv94r9m")) "01l4jczglkl7yfhgvzx8j0df7k54bk1r8sli9ll16i1mis0d8f37"))
(patches (search-patches "khmer-use-libraries.patch"))
(modules '((guix build utils))) (modules '((guix build utils)))
(snippet (snippet
'(begin '(begin
@ -4192,6 +4191,12 @@ command, or queried for specific k-mers with @code{jellyfish query}.")
;; https://lists.gnu.org/archive/html/guix-devel/2016-06/msg00977.html ;; https://lists.gnu.org/archive/html/guix-devel/2016-06/msg00977.html
(delete-file-recursively "third-party/zlib") (delete-file-recursively "third-party/zlib")
(delete-file-recursively "third-party/bzip2") (delete-file-recursively "third-party/bzip2")
(delete-file-recursively "third-party/seqan")
(substitute* "setup.cfg"
(("# libraries = z,bz2")
"libraries = z,bz2")
(("include:third-party/zlib:third-party/bzip2")
"include:"))
#t)))) #t))))
(build-system python-build-system) (build-system python-build-system)
(arguments (arguments
@ -4208,6 +4213,7 @@ command, or queried for specific k-mers with @code{jellyfish query}.")
(inputs (inputs
`(("zlib" ,zlib) `(("zlib" ,zlib)
("bzip2" ,bzip2) ("bzip2" ,bzip2)
("seqan" ,seqan-1)
("python-screed" ,python-screed) ("python-screed" ,python-screed)
("python-bz2file" ,python-bz2file))) ("python-bz2file" ,python-bz2file)))
(home-page "https://khmer.readthedocs.org/") (home-page "https://khmer.readthedocs.org/")
@ -6954,14 +6960,14 @@ ungapped alignment formats.")
(define-public r-systempiper (define-public r-systempiper
(package (package
(name "r-systempiper") (name "r-systempiper")
(version "1.18.1") (version "1.18.2")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "systemPipeR" version)) (uri (bioconductor-uri "systemPipeR" version))
(sha256 (sha256
(base32 (base32
"1k57zyzagd7g7wl38l3cn9csylykxcllbfvyq7dz8pvihgkn0ssi")))) "18s5vpmw766pm64w7bwwfgpsv9yzhwclf0ya1rpqz8qslw7bbdjf"))))
(properties `((upstream-name . "systemPipeR"))) (properties `((upstream-name . "systemPipeR")))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
@ -7461,13 +7467,13 @@ names in their natural, rather than lexicographic, order.")
(define-public r-edger (define-public r-edger
(package (package
(name "r-edger") (name "r-edger")
(version "3.26.4") (version "3.26.5")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "edgeR" version)) (uri (bioconductor-uri "edgeR" version))
(sha256 (sha256
(base32 (base32
"013glavk6a1wpyq3q35k343bdp6rf27w30q59i4kf47rp3i37g15")))) "0iba4krz30dx5b0s89n5cfkwn64867s7vmvvfqms9lbcr4kj439m"))))
(properties `((upstream-name . "edgeR"))) (properties `((upstream-name . "edgeR")))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
@ -7661,13 +7667,13 @@ annotation data packages using SQLite data storage.")
(define-public r-biomart (define-public r-biomart
(package (package
(name "r-biomart") (name "r-biomart")
(version "2.40.0") (version "2.40.1")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "biomaRt" version)) (uri (bioconductor-uri "biomaRt" version))
(sha256 (sha256
(base32 (base32
"1i457s91bn7n60bzw3zk4h64xgmawlrr6bq4z4cb7jlm04hdq8qm")))) "1abl0c4qbhfqf9ixdp74183phm7s8rszrr5ldczm59b8vyng8rhx"))))
(properties (properties
`((upstream-name . "biomaRt"))) `((upstream-name . "biomaRt")))
(build-system r-build-system) (build-system r-build-system)
@ -7853,13 +7859,13 @@ samples.")
(define-public r-genomicalignments (define-public r-genomicalignments
(package (package
(name "r-genomicalignments") (name "r-genomicalignments")
(version "1.20.0") (version "1.20.1")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "GenomicAlignments" version)) (uri (bioconductor-uri "GenomicAlignments" version))
(sha256 (sha256
(base32 (base32
"13zw7bb1adgph9bf9b9y725nr0320b80y70p2yqf3bjb2klfxf55")))) "0s3q97q4pgj5jwn4g95al44rahrwsncsf45v01v4071msx3xmjxq"))))
(properties (properties
`((upstream-name . "GenomicAlignments"))) `((upstream-name . "GenomicAlignments")))
(build-system r-build-system) (build-system r-build-system)
@ -7933,13 +7939,13 @@ as well as query and modify the browser state, such as the current viewport.")
(define-public r-genomicfeatures (define-public r-genomicfeatures
(package (package
(name "r-genomicfeatures") (name "r-genomicfeatures")
(version "1.36.1") (version "1.36.3")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "GenomicFeatures" version)) (uri (bioconductor-uri "GenomicFeatures" version))
(sha256 (sha256
(base32 (base32
"02psq3jfgghdydwbydb1j792lvfg44l5npb44mx8d54ckr8658dd")))) "0zkd57i5qjxsravv0gbyckc0wrnqzgxd61ibh3jmhmrccrr9ihn3"))))
(properties (properties
`((upstream-name . "GenomicFeatures"))) `((upstream-name . "GenomicFeatures")))
(build-system r-build-system) (build-system r-build-system)
@ -8556,13 +8562,13 @@ factors bound at the specific regions.")
(define-public r-tximport (define-public r-tximport
(package (package
(name "r-tximport") (name "r-tximport")
(version "1.12.1") (version "1.12.3")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "tximport" version)) (uri (bioconductor-uri "tximport" version))
(sha256 (sha256
(base32 (base32
"1nq8v1sgkm2ssmvr2z3qw0zsk7zy0dzb95g1mfs8fkpjqh3nqq5s")))) "070nx0blvvfhsnkbb5j899wy7dgalrh4xfcciir9l2xl67lna1zf"))))
(build-system r-build-system) (build-system r-build-system)
(home-page "https://bioconductor.org/packages/tximport") (home-page "https://bioconductor.org/packages/tximport")
(synopsis "Import and summarize transcript-level estimates for gene-level analysis") (synopsis "Import and summarize transcript-level estimates for gene-level analysis")
@ -10687,14 +10693,14 @@ memory usage and processing time is minimized.")
(define-public r-phangorn (define-public r-phangorn
(package (package
(name "r-phangorn") (name "r-phangorn")
(version "2.5.3") (version "2.5.5")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "phangorn" version)) (uri (cran-uri "phangorn" version))
(sha256 (sha256
(base32 (base32
"1bv86yfk5r015s7ij6v4zz7bagwrw9m13yfs5853drxb19d5h1m3")))) "0ihkaykqjmf80d8wrk3saphxvnv58zma6pd13633bd3cwanc33f5"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-ape" ,r-ape) `(("r-ape" ,r-ape)
@ -12742,7 +12748,7 @@ methylation and segmentation.")
(define-public pigx-scrnaseq (define-public pigx-scrnaseq
(package (package
(name "pigx-scrnaseq") (name "pigx-scrnaseq")
(version "0.0.7") (version "0.0.8")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://github.com/BIMSBbioinfo/pigx_scrnaseq/" (uri (string-append "https://github.com/BIMSBbioinfo/pigx_scrnaseq/"
@ -12750,7 +12756,7 @@ methylation and segmentation.")
"/pigx_scrnaseq-" version ".tar.gz")) "/pigx_scrnaseq-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"131zarirv16w8653m0d66jgjnwqfsxqc0hix0rypssz4d83bl51j")))) "0zv0sc5amivxhb95vx2gfx6l9bh7n80fh7h47dalnwxxnfvnzai4"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:configure-flags `(#:configure-flags

4
gnu/packages/calcurse.scm
View File

@ -30,14 +30,14 @@
(define-public calcurse (define-public calcurse
(package (package
(name "calcurse") (name "calcurse")
(version "4.4.0") (version "4.5.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://calcurse.org/files/calcurse-" (uri (string-append "https://calcurse.org/files/calcurse-"
version ".tar.gz")) version ".tar.gz"))
(sha256 (sha256
(base32 "0vw2xi6a2lrhrb8n55zq9lv4mzxhby4xdf3hmi1vlfpyrpdwkjzd")))) (base32 "1vjwcmp51h7dsvwn0qx93w9chp3wp970v7d9mjhk7jyamcbfywn3"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(inputs `(("ncurses" ,ncurses))) (inputs `(("ncurses" ,ncurses)))
(native-inputs `(("tzdata" ,tzdata-for-tests))) (native-inputs `(("tzdata" ,tzdata-for-tests)))

7
gnu/packages/check.scm
View File

@ -478,12 +478,10 @@ test coverage and has a web user interface that will refresh automatically.")
(home-page "https://github.com/smartystreets/goconvey") (home-page "https://github.com/smartystreets/goconvey")
(license license:expat))) (license license:expat)))
;; XXX When updating, check whether ZNC's GOOGLETEST-SOURCES can be
;; switched back to simply using (PACKAGE-SOURCE ...).
(define-public googletest (define-public googletest
(package (package
(name "googletest") (name "googletest")
(version "1.8.0") (version "1.8.1")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
@ -492,8 +490,7 @@ test coverage and has a web user interface that will refresh automatically.")
(commit (string-append "release-" version)))) (commit (string-append "release-" version))))
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32 "0270msj6n7mggh4xqqjp54kswbl7mkcc8px1p5dqdpmw5ngh9fzk"))))
"0bjlljmbf8glnd9qjabx73w6pd7ibv43yiyngqvmvgxsabzr8399"))))
(build-system cmake-build-system) (build-system cmake-build-system)
(arguments (arguments
`(#:configure-flags '("-DBUILD_SHARED_LIBS=ON"))) `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON")))

5
gnu/packages/chromium.scm
View File

@ -755,6 +755,11 @@ from forcing GEXP-PROMISE."
("udev" ,eudev) ("udev" ,eudev)
("valgrind" ,valgrind) ("valgrind" ,valgrind)
("vulkan-headers" ,vulkan-headers))) ("vulkan-headers" ,vulkan-headers)))
;; Building Chromium with a single core takes around 6 hours on an x86_64
;; system. Give some leeway for slower or busy machines.
(properties '((timeout . 64800))) ;18 hours
(home-page "https://github.com/Eloston/ungoogled-chromium") (home-page "https://github.com/Eloston/ungoogled-chromium")
(description (description
"Ungoogled-Chromium is the Chromium web browser, with some functionality "Ungoogled-Chromium is the Chromium web browser, with some functionality

40
gnu/packages/compression.scm
View File

@ -23,6 +23,7 @@
;;; Copyright © 2018 Rutger Helling <rhelling@mykolab.com> ;;; Copyright © 2018 Rutger Helling <rhelling@mykolab.com>
;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com> ;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
;;; Copyright © 2018 Pierre Neidhardt <mail@ambrevar.xyz> ;;; Copyright © 2018 Pierre Neidhardt <mail@ambrevar.xyz>
;;; Copyright © 2019 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -55,11 +56,13 @@
#:use-module (gnu packages boost) #:use-module (gnu packages boost)
#:use-module (gnu packages check) #:use-module (gnu packages check)
#:use-module (gnu packages curl) #:use-module (gnu packages curl)
#:use-module (gnu packages documentation)
#:use-module (gnu packages file) #:use-module (gnu packages file)
#:use-module (gnu packages maths) #:use-module (gnu packages maths)
#:use-module (gnu packages perl) #:use-module (gnu packages perl)
#:use-module (gnu packages pkg-config) #:use-module (gnu packages pkg-config)
#:use-module (gnu packages python) #:use-module (gnu packages python)
#:use-module (gnu packages qt)
#:use-module (gnu packages tls) #:use-module (gnu packages tls)
#:use-module (gnu packages valgrind) #:use-module (gnu packages valgrind)
#:use-module (ice-9 match) #:use-module (ice-9 match)
@ -1886,3 +1889,40 @@ compressor. UPX typically reduces the file size of programs and shared
libraries by around 50%--70%, thus reducing disk space, network load times, libraries by around 50%--70%, thus reducing disk space, network load times,
download times, and other distribution and storage costs.") download times, and other distribution and storage costs.")
(license license:gpl2+))) (license license:gpl2+)))
(define-public quazip
(package
(name "quazip")
(version "0.8.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/stachenov/quazip.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1g473gnsbkvxpsv8lbsmhspn7jnq86b05zzgqh11r581v8ndvz5s"))))
(build-system cmake-build-system)
(arguments
`(#:tests? #f)) ;no test
(native-inputs
`(("doxygen" ,doxygen)))
(inputs
`(("qtbase" ,qtbase)
("zlib" ,zlib)))
(home-page "https://stachenov.github.io/quazip/index.html")
(synopsis "Qt/C++ wrapper for Minizip")
(description "QuaZIP is a simple C++ wrapper over Gilles Vollant's
ZIP/UNZIP package that can be used to access ZIP archives. It uses
Trolltech's Qt toolkit.
QuaZIP allows you to access files inside ZIP archives using QIODevice
API, and that means that you can also use QTextStream, QDataStream or
whatever you would like to use on your zipped files.
QuaZIP provides complete abstraction of the ZIP/UNZIP API, for both
reading from and writing to ZIP archives. ")
;; Project is distributed under LGPL, but "quazip/z*" "quazip/unzip.*" are
;; distributed under zlib terms.
(license (list license:lgpl2.1+ license:zlib))))

85
gnu/packages/cran.scm
View File

@ -97,15 +97,17 @@ the system clipboards.")
(define-public r-ellipsis (define-public r-ellipsis
(package (package
(name "r-ellipsis") (name "r-ellipsis")
(version "0.1.0") (version "0.2.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "ellipsis" version)) (uri (cran-uri "ellipsis" version))
(sha256 (sha256
(base32 (base32
"0pw94qpg81xmsdsagpqxddv7m2cmdszmyyq99dk3caqqj01z7wg6")))) "0hdk79q4wn5nq52p8qd65kqz81l0b8gfzsbzyvmfais0p24qclib"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs
`(("r-rlang" ,r-rlang)))
(home-page "https://github.com/hadley/ellipsis") (home-page "https://github.com/hadley/ellipsis")
(synopsis "Tools for working with additional arguments") (synopsis "Tools for working with additional arguments")
(description (description
@ -1115,14 +1117,14 @@ and several other tools.")
(define-public r-abbyyr (define-public r-abbyyr
(package (package
(name "r-abbyyr") (name "r-abbyyr")
(version "0.5.4") (version "0.5.5")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "abbyyR" version)) (uri (cran-uri "abbyyR" version))
(sha256 (sha256
(base32 (base32
"1jh1c1ad6mgw7brdh2isnza1qpjlfxnqr7jl76yd93axyfl76xjx")))) "1vldnd3dg89aj6a73nhirirqddbfdrnzhb5m3679i60sark8nk6r"))))
(properties `((upstream-name . "abbyyR"))) (properties `((upstream-name . "abbyyR")))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
@ -3196,14 +3198,14 @@ simplifying cross-class interoperability.")
(define-public r-performanceanalytics (define-public r-performanceanalytics
(package (package
(name "r-performanceanalytics") (name "r-performanceanalytics")
(version "1.5.2") (version "1.5.3")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "PerformanceAnalytics" version)) (uri (cran-uri "PerformanceAnalytics" version))
(sha256 (sha256
(base32 (base32
"01bgm57z079g6r505w3bj293zkbd49fwa8sg55z87vizwavipml6")))) "0jhjldwyxwq7a47zmk5y1jjck7hvq92p8rlgjvdfy51hx2dmlqqd"))))
(properties (properties
`((upstream-name . "PerformanceAnalytics"))) `((upstream-name . "PerformanceAnalytics")))
(build-system r-build-system) (build-system r-build-system)
@ -3617,14 +3619,14 @@ iVAT).")
(define-public r-xfun (define-public r-xfun
(package (package
(name "r-xfun") (name "r-xfun")
(version "0.7") (version "0.8")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "xfun" version)) (uri (cran-uri "xfun" version))
(sha256 (sha256
(base32 (base32
"1gllyyjhkvswcwa15h1f3kb1l1drs2ifpxy4jjanmmhaj7wcmvy9")))) "05jlbi5byqpw0fkhmmxqglnaxh9gwbcigx77kcpw1pkxnpwfry62"))))
(build-system r-build-system) (build-system r-build-system)
(home-page "https://github.com/yihui/xfun") (home-page "https://github.com/yihui/xfun")
(synopsis "Miscellaneous functions") (synopsis "Miscellaneous functions")
@ -3761,14 +3763,14 @@ terminals.")
(define-public r-tinytex (define-public r-tinytex
(package (package
(name "r-tinytex") (name "r-tinytex")
(version "0.13") (version "0.14")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "tinytex" version)) (uri (cran-uri "tinytex" version))
(sha256 (sha256
(base32 (base32
"1bbphyrbk2rnyi0jhw4hj2w4l84kyhb0km901qd5qnnl0cy6dzvb")))) "0aab7ybc6kkxxk3lzdmbla8zcpp6nmlahchc33miv28cmnqw363w"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-xfun" ,r-xfun))) `(("r-xfun" ,r-xfun)))
@ -4009,14 +4011,14 @@ Fisher's method), and Sidak correction.")
(define-public r-quantmod (define-public r-quantmod
(package (package
(name "r-quantmod") (name "r-quantmod")
(version "0.4-14") (version "0.4-15")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "quantmod" version)) (uri (cran-uri "quantmod" version))
(sha256 (sha256
(base32 (base32
"1csljagnpkr1mmc18h70b64zbyj07kx972nip9dng39jfg7ilnyr")))) "0lyzaf5ypk93v6zj9gdghy05cc7cxgn9yasv1apx5r6qsjcfgwky"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-curl" ,r-curl) `(("r-curl" ,r-curl)
@ -4418,17 +4420,18 @@ fit into memory.")
(define-public r-cgdsr (define-public r-cgdsr
(package (package
(name "r-cgdsr") (name "r-cgdsr")
(version "1.2.10") (version "1.3.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "cgdsr" version)) (uri (cran-uri "cgdsr" version))
(sha256 (sha256
(base32 (base32
"1xyhw7mhmjichr1l6f9y1qvfj9wm87kfbm87ji7lcwf36gxh5g23")))) "07yc819hkabpzzh0g0cbqza6bcfy67b2marrzz1lj97f9iba78ja"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-r-methodss3" ,r-r-methodss3) `(("r-httr" ,r-httr)
("r-r-methodss3" ,r-r-methodss3)
("r-r-oo" ,r-r-oo))) ("r-r-oo" ,r-r-oo)))
(home-page "https://github.com/cBioPortal/cgdsr") (home-page "https://github.com/cBioPortal/cgdsr")
(synopsis "R-based API for accessing the MSKCC Cancer Genomics Data Server") (synopsis "R-based API for accessing the MSKCC Cancer Genomics Data Server")
@ -5385,14 +5388,14 @@ and adds the annotation to the plot.")
(define-public r-ggpubr (define-public r-ggpubr
(package (package
(name "r-ggpubr") (name "r-ggpubr")
(version "0.2") (version "0.2.1")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "ggpubr" version)) (uri (cran-uri "ggpubr" version))
(sha256 (sha256
(base32 (base32
"0rkpcjb1x7lvhj68aam5airbi534jqyiq12x5xk40a25iifhghq6")))) "0a4dv6a752hwvc7l31xs7bgqhfzfdy94xp6wgwaxf5dxm46na7k1"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-cowplot" ,r-cowplot) `(("r-cowplot" ,r-cowplot)
@ -5719,14 +5722,14 @@ references and Rd files.")
(define-public r-officer (define-public r-officer
(package (package
(name "r-officer") (name "r-officer")
(version "0.3.4") (version "0.3.5")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "officer" version)) (uri (cran-uri "officer" version))
(sha256 (sha256
(base32 (base32
"1m4b3mcn5j5q3nq0jp1nranh4rdb8vxcpabn6ryqk9m6709fvhjz")))) "005kaxjhr40shpav2pg7s7gj8f49579r7rbgwlncbwv16nn0rbbg"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-base64enc" ,r-base64enc) `(("r-base64enc" ,r-base64enc)
@ -5883,14 +5886,14 @@ parse and convert strings into cases like snake or camel among others.")
(define-public r-prediction (define-public r-prediction
(package (package
(name "r-prediction") (name "r-prediction")
(version "0.3.6.2") (version "0.3.14")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "prediction" version)) (uri (cran-uri "prediction" version))
(sha256 (sha256
(base32 (base32
"0kx7xbm2j6c8h6gk1iig4vfpg877psg16j74hl7zc2mv40sc6dy5")))) "0awlq5lxfia6m2b91w73rksp93rbwv5gwqb36wbji4rgq41rzbrx"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-data-table" ,r-data-table))) `(("r-data-table" ,r-data-table)))
@ -5962,14 +5965,14 @@ vice versa), or to deal with multiple declared missing values.")
(define-public r-sjmisc (define-public r-sjmisc
(package (package
(name "r-sjmisc") (name "r-sjmisc")
(version "2.8.0") (version "2.8.1")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "sjmisc" version)) (uri (cran-uri "sjmisc" version))
(sha256 (sha256
(base32 (base32
"0pgavkygsj8fa591pmasx78b4gd32sf2pa067yqvi82xha7dj5k4")))) "1a30n3cyd9h9ilaiai9ywy53f03nikafc47rvpws2c2vghc8mbn7"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-dplyr" ,r-dplyr) `(("r-dplyr" ,r-dplyr)
@ -6039,14 +6042,14 @@ functions.")
(define-public r-flextable (define-public r-flextable
(package (package
(name "r-flextable") (name "r-flextable")
(version "0.5.4") (version "0.5.5")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "flextable" version)) (uri (cran-uri "flextable" version))
(sha256 (sha256
(base32 (base32
"0h6ylgz1mn61d2kh1bym8hfl3r7nf4z092lmjsaav3h1ki3avrnl")))) "1q6x9mfk5gikqjbbra1dn8hs1rq5ws99jdjav3m113gx9f2j5yxh"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-base64enc" ,r-base64enc) `(("r-base64enc" ,r-base64enc)
@ -6639,13 +6642,13 @@ and coverage methods to tune the choice of threshold.")
(define-public r-ggstance (define-public r-ggstance
(package (package
(name "r-ggstance") (name "r-ggstance")
(version "0.3.1") (version "0.3.2")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "ggstance" version)) (uri (cran-uri "ggstance" version))
(sha256 (sha256
(base32 "0v7f3xdaaridw6d4jvnsfwxmpjrasvx5vl555wsrn50aah17fkvh")))) (base32 "078ih9s5b0xzf582qg0vjnxvg5qad5ms1v2vdd062ckahi8zz1r8"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-ggplot2" ,r-ggplot2) `(("r-ggplot2" ,r-ggplot2)
@ -7694,14 +7697,14 @@ Hothorn, Westfall, 2010, CRC Press).")
(define-public r-emmeans (define-public r-emmeans
(package (package
(name "r-emmeans") (name "r-emmeans")
(version "1.3.5") (version "1.3.5.1")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "emmeans" version)) (uri (cran-uri "emmeans" version))
(sha256 (sha256
(base32 (base32
"0zyink60132f2a0491a94bf67hq8a0bwmw5wn19l0ms8iyiml9d2")))) "0rgzjvmp3yqhwgfg96v17wi8gbafzbrmz134shj2jsf5bsmw6vbj"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-estimability" ,r-estimability) `(("r-estimability" ,r-estimability)
@ -7926,14 +7929,14 @@ differentiation.")
(define-public r-bayestestr (define-public r-bayestestr
(package (package
(name "r-bayestestr") (name "r-bayestestr")
(version "0.2.0") (version "0.2.2")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "bayestestR" version)) (uri (cran-uri "bayestestR" version))
(sha256 (sha256
(base32 (base32
"0729j4fdxkkvmh99nmny38dywidzgmipdjqbi2ljxygsn4jg7ysy")))) "09r654lrhwwnshn5h2s2fbx3c8wigv3j4sva5hmfnkwjg8cclhd9"))))
(properties `((upstream-name . "bayestestR"))) (properties `((upstream-name . "bayestestR")))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
@ -8209,14 +8212,14 @@ more information about packages, and where they were installed from.")
(define-public r-remotes (define-public r-remotes
(package (package
(name "r-remotes") (name "r-remotes")
(version "2.0.4") (version "2.1.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "remotes" version)) (uri (cran-uri "remotes" version))
(sha256 (sha256
(base32 (base32
"1jbn4kjimcr82zv5lnqxqa2487a96vn6jxf7wc6gnpxr6k06d61p")))) "19v8dmnk9l4i9m64p7zgmj7y1vhnnwhi5kyn0k5d034zzkvchi49"))))
(build-system r-build-system) (build-system r-build-system)
(home-page "https://github.com/r-lib/remotes#readme") (home-page "https://github.com/r-lib/remotes#readme")
(synopsis "R package installation from remote repositories") (synopsis "R package installation from remote repositories")
@ -8722,14 +8725,14 @@ Bioconductor packages.")
(define-public r-rgl (define-public r-rgl
(package (package
(name "r-rgl") (name "r-rgl")
(version "0.100.19") (version "0.100.24")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "rgl" version)) (uri (cran-uri "rgl" version))
(sha256 (sha256
(base32 (base32
"09bhvx8aq104yzysfgd7wlnq4vrvmnd4jzgj0c32whjfal10fqsh")))) "0nm3iyvhhmh0zlywkfmrq3vyh8z1l296xxfmcky0ifd2qnysfcqj"))))
(build-system r-build-system) (build-system r-build-system)
(native-inputs (native-inputs
`(("pkg-config" ,pkg-config))) `(("pkg-config" ,pkg-config)))
@ -9555,14 +9558,14 @@ Touzet and Varre (2007).")
(define-public r-rnifti (define-public r-rnifti
(package (package
(name "r-rnifti") (name "r-rnifti")
(version "0.10.0") (version "0.11.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "RNifti" version)) (uri (cran-uri "RNifti" version))
(sha256 (sha256
(base32 (base32
"07sfzps4yg5zdhbxh6i4rbjvbjvvf2d8i9jcf64ywbmi557sw1zv")))) "0zs8ffa6gpi9cygxk7xjin6k3vpvfgb540a506zlk50bf6kc5nlf"))))
(properties `((upstream-name . "RNifti"))) (properties `((upstream-name . "RNifti")))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs `(("r-rcpp" ,r-rcpp))) (propagated-inputs `(("r-rcpp" ,r-rcpp)))
@ -10590,14 +10593,14 @@ for association and heterogeneity.")
(define-public r-bootstrap (define-public r-bootstrap
(package (package
(name "r-bootstrap") (name "r-bootstrap")
(version "2017.2") (version "2019.6")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "bootstrap" version)) (uri (cran-uri "bootstrap" version))
(sha256 (sha256
(base32 (base32
"08lmsy7k8wsgv89yc904c6fidcymr1ma2ry4fl0p69p21v4iiwa4")))) "1546jqhhw5h177ii8jkdikyd26rv6gwkav816np1zks4p7zgsljj"))))
(build-system r-build-system) (build-system r-build-system)
(native-inputs `(("gfortran" ,gfortran))) (native-inputs `(("gfortran" ,gfortran)))
(home-page "https://cran.r-project.org/web/packages/bootstrap") (home-page "https://cran.r-project.org/web/packages/bootstrap")
@ -11000,14 +11003,14 @@ the local machine to, say, distributed processing on a remote compute cluster.")
(define-public r-future-apply (define-public r-future-apply
(package (package
(name "r-future-apply") (name "r-future-apply")
(version "1.2.0") (version "1.3.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "future.apply" version)) (uri (cran-uri "future.apply" version))
(sha256 (sha256
(base32 (base32
"00ma43ma3byrf9vfqqn9g8sn18c71ryhk7lpza5h7817f1kibw1h")))) "0wd3bh114zkvrqlpn8gqz4ix1igr9hr8x72h2g00a7mqkfjfqx33"))))
(properties `((upstream-name . "future.apply"))) (properties `((upstream-name . "future.apply")))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs

22
gnu/packages/databases.scm
View File

@ -35,6 +35,7 @@
;;; Copyright © 2018 Maxim Cournoyer <maxim.cournoyer@gmail.com> ;;; Copyright © 2018 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us> ;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us>
;;; Copyright © 2019 Alex Griffin <a@ajgrf.com> ;;; Copyright © 2019 Alex Griffin <a@ajgrf.com>
;;; Copyright © 2019 Gábor Boskovits <boskovits@gmail.com>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -272,14 +273,14 @@ mapping from string keys to string values.")
(define-public memcached (define-public memcached
(package (package
(name "memcached") (name "memcached")
(version "1.5.14") (version "1.5.16")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (string-append (uri (string-append
"https://memcached.org/files/memcached-" version ".tar.gz")) "https://memcached.org/files/memcached-" version ".tar.gz"))
(sha256 (sha256
(base32 "1agj198rm5kc64z8qxck65kdzvw30pdfxalygipnryw0lwlxynww")))) (base32 "0nnccb697jhdn5gqrh3phibzs6xr4nf4ryv7nmyv5vf11n4jr8j5"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(inputs (inputs
`(("libevent" ,libevent) `(("libevent" ,libevent)
@ -846,6 +847,19 @@ TIMESTAMP. It also supports storage of binary large objects, including
pictures, sounds, or video.") pictures, sounds, or video.")
(license (license:x11-style "file://COPYRIGHT")))) (license (license:x11-style "file://COPYRIGHT"))))
(define-public postgresql-11
(package
(inherit postgresql)
(name "postgresql")
(version "11.4")
(source (origin
(method url-fetch)
(uri (string-append "https://ftp.postgresql.org/pub/source/v"
version "/postgresql-" version ".tar.bz2"))
(sha256
(base32
"12ycjlqncijgmd5z078ybwda8ilas96lc7nxxmdq140mzpgjv002"))))))
(define-public postgresql-9.6 (define-public postgresql-9.6
(package (package
(inherit postgresql) (inherit postgresql)
@ -2150,13 +2164,13 @@ etc., and an SQL engine for performing simple SQL queries.")
(define-public python-lmdb (define-public python-lmdb
(package (package
(name "python-lmdb") (name "python-lmdb")
(version "0.94") (version "0.95")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (pypi-uri "lmdb" version)) (uri (pypi-uri "lmdb" version))
(sha256 (sha256
(base32 (base32
"1zh38gvkqw1jm5105if6rr7ccbgyxr7k2rm5ygb9ab3bq82pyaww")) "0nx9f193gzl33r1lbqhb96h1igya7pz8wmahr8m9x5zgc05hal91"))
(modules '((guix build utils))) (modules '((guix build utils)))
(snippet (snippet
;; Delete bundled lmdb source files. ;; Delete bundled lmdb source files.

13
gnu/packages/disk.scm
View File

@ -439,15 +439,16 @@ a card with a smaller capacity than stated.")
(define-public python-parted (define-public python-parted
(package (package
(name "python-parted") (name "python-parted")
(version "3.11.1") (version "3.11.2")
(source (source
(origin (origin
(method url-fetch) (method git-fetch)
(uri (string-append "https://github.com/dcantrell/pyparted/archive/v" (uri (git-reference
version ".tar.gz")) (url "https://github.com/dcantrell/pyparted.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32 "0r6916n3w4vldxrq30a3z2iagvxgly4vfmlidjm65vwqnyv17bvn"))))
"0r1nyjj40nacnfnv17x2mnsj6ga1qplyxyza82v2809dfhim2fwq"))))
(build-system python-build-system) (build-system python-build-system)
(arguments (arguments
`(#:phases `(#:phases

6
gnu/packages/education.scm
View File

@ -250,17 +250,17 @@ easy.")
(define-public snap (define-public snap
(package (package
(name "snap") (name "snap")
(version "4.2.2.9") (version "5")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
(uri (git-reference (uri (git-reference
(url "https://github.com/jmoenig/Snap.git") (url "https://github.com/jmoenig/Snap.git")
(commit version))) (commit (string-append "v" version))))
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"07qyhh4f8gr1fqyvxa2i6lkzaaa0vl12yzllgp81rdil8z8bi976")))) "0bh52n7nklaaq02qb56v7bvrslf047my6irl7g8h6xfjgw04yf20"))))
(build-system trivial-build-system) (build-system trivial-build-system)
(arguments (arguments
`(#:modules ((guix build utils)) `(#:modules ((guix build utils))

457
gnu/packages/emacs-xyz.scm
View File

@ -236,7 +236,7 @@ configuration files, such as .gitattributes, .gitignore, and .git/config.")
(define-public emacs-with-editor (define-public emacs-with-editor
(package (package
(name "emacs-with-editor") (name "emacs-with-editor")
(version "2.8.0") (version "2.8.3")
(source (origin (source (origin
(method git-fetch) (method git-fetch)
(uri (git-reference (uri (git-reference
@ -245,7 +245,7 @@ configuration files, such as .gitattributes, .gitignore, and .git/config.")
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"1bbzvxnjpxqyvi808isld025b3pcidn4r2xf8hnk9bmzcfdvdr6q")))) "1z2h9casyw1b93ikq2mf9xixyvbl90zddf0s66lqfiyj2y376pq3"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(propagated-inputs (propagated-inputs
`(("emacs-dash" ,emacs-dash))) `(("emacs-dash" ,emacs-dash)))
@ -3151,7 +3151,7 @@ build jobs.")
(define-public emacs-company (define-public emacs-company
(package (package
(name "emacs-company") (name "emacs-company")
(version "0.9.7") (version "0.9.10")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
@ -3160,7 +3160,7 @@ build jobs.")
(commit version))) (commit version)))
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 "1gpapjxs4l6fmmj22q0q1pyhj1yd9j5iqfqnjf1abskkj69lqkpj")))) (base32 "0shmv48bq9l5xm60dwx9lqyq6b39y3d7qjxdlah7dpipv5vhra42"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(arguments (arguments
`(#:phases `(#:phases
@ -4180,7 +4180,7 @@ them easier to distinguish from other, less important buffers.")
(define-public emacs-prescient (define-public emacs-prescient
(package (package
(name "emacs-prescient") (name "emacs-prescient")
(version "2.2.2") (version "3.1")
(source (origin (source (origin
(method git-fetch) (method git-fetch)
(uri (git-reference (uri (git-reference
@ -4189,7 +4189,7 @@ them easier to distinguish from other, less important buffers.")
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"1ncplx5p3cffyzg9ygzqqxj0vpvwrz9rp2n4z6c375a78fyydrk0")))) "1cdjvlwlvxxazz7hlxgvdp0pznvj1gzqa2r6k4im0cpdrnnng6j6"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(propagated-inputs (propagated-inputs
`(("emacs-company" ,emacs-company) `(("emacs-company" ,emacs-company)
@ -4615,18 +4615,23 @@ use it, call @code{M-x ivy-yasnippet} (but make sure you have enabled
(license license:gpl3+)))) (license license:gpl3+))))
(define-public emacs-ivy-rich (define-public emacs-ivy-rich
;; The latest release version has a small mistake that has since been fixed,
;; so we use a more recent commit.
(let ((commit "f6bfa293c6df0b43cc411876b665816ec3f03d08")
(version "0.1.4")
(revision "1"))
(package (package
(name "emacs-ivy-rich") (name "emacs-ivy-rich")
(version "0.1.0") (version (git-version version revision commit))
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
(uri (git-reference (uri (git-reference
(url "https://github.com/Yevgnen/ivy-rich.git") (url "https://github.com/Yevgnen/ivy-rich.git")
(commit version))) (commit commit)))
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 "0ayf3dwfhafcbqnckm65zy8nc1rv9ji939qfn53wbhxkrgqdicgz")))) (base32 "1s8nwwb1z6lkc58g02pi8w99qms948k8d02lw8k8cq47dw87i219"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(propagated-inputs (propagated-inputs
`(("emacs-ivy" ,emacs-ivy))) `(("emacs-ivy" ,emacs-ivy)))
@ -4637,7 +4642,7 @@ use it, call @code{M-x ivy-yasnippet} (but make sure you have enabled
minibuffer for each candidate. It adds columns showing buffer modes, file minibuffer for each candidate. It adds columns showing buffer modes, file
sizes, docstrings, etc. If @code{emacs-all-the-icons} is installed, it can sizes, docstrings, etc. If @code{emacs-all-the-icons} is installed, it can
show icons as well.") show icons as well.")
(license license:gpl3+))) (license license:gpl3+))))
(define-public emacs-avy (define-public emacs-avy
(package (package
@ -5105,15 +5110,16 @@ strings, and code folding.")
(define-public emacs-nodejs-repl (define-public emacs-nodejs-repl
(package (package
(name "emacs-nodejs-repl") (name "emacs-nodejs-repl")
(version "0.2.0") (version "0.2.1")
(source (origin (source (origin
(method url-fetch) (method git-fetch)
(uri (string-append "https://github.com/abicky/nodejs-repl.el" (uri (git-reference
"/archive/" version ".tar.gz")) (url "https://github.com/abicky/nodejs-repl.el")
(commit version)))
(file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"0hq2cqdq2668yf48g7qnkci90nhih1gnhacsgz355jnib56lhmkz")) "05ccv87rnw7fss3lib8m9sywjrj6n92fnd7mmhmjh27g2klqc83z"))))
(file-name (string-append name "-" version ".tar.gz"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(home-page "https://github.com/abicky/nodejs-repl.el") (home-page "https://github.com/abicky/nodejs-repl.el")
(synopsis "Node.js REPL inside Emacs") (synopsis "Node.js REPL inside Emacs")
@ -5133,14 +5139,14 @@ features:
(name "emacs-typescript-mode") (name "emacs-typescript-mode")
(version "0.3") (version "0.3")
(source (origin (source (origin
(method url-fetch) (method git-fetch)
(uri (string-append (uri (git-reference
"https://github.com/ananthakumaran/typescript.el" (url "https://github.com/ananthakumaran/typescript.el")
"/archive/v" version ".tar.gz")) (commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"1gqjirm8scf0wysm7x97zdfbs4qa5nqdl64jfbkd18iskv5mg3rj")) "002f1xfhq43fjaqliwrgxspryfahpa82va5dw3p8kwil2xwvc6mh"))))
(file-name (string-append name "-" version ".tar.gz"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(home-page "https://github.com/ananthakumaran/typescript.el") (home-page "https://github.com/ananthakumaran/typescript.el")
(synopsis "Emacs major mode for editing Typescript code") (synopsis "Emacs major mode for editing Typescript code")
@ -5160,13 +5166,14 @@ indentation and filling of comments and C preprocessor fontification.")
(name "emacs-tide") (name "emacs-tide")
(version "3.2.3") (version "3.2.3")
(source (origin (source (origin
(method url-fetch) (method git-fetch)
(uri (string-append "https://github.com/ananthakumaran/tide" (uri (git-reference
"/archive/v" version ".tar.gz")) (url "https://github.com/ananthakumaran/tide")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"1c600myr2yqbkmy9lify38lz0zzjdqk1733db5n7vsay16vn6fzi")) "19kjq4kr2j853p5qp1s79zxmrfprli82lsnphbrlp9vbnib28xyd"))))
(file-name (string-append name "-" version ".tar.gz"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(propagated-inputs (propagated-inputs
`(("emacs-dash" ,emacs-dash) `(("emacs-dash" ,emacs-dash)
@ -5761,14 +5768,14 @@ Dust.js, React/JSX, Angularjs, ejs, etc.")
(name "emacs-wgrep") (name "emacs-wgrep")
(version "2.3.0") (version "2.3.0")
(source (origin (source (origin
(method url-fetch) (method git-fetch)
(uri (string-append (uri (git-reference
"https://github.com/mhayashi1120/Emacs-wgrep/archive/" (url "https://github.com/mhayashi1120/Emacs-wgrep")
version ".tar.gz")) (commit version)))
(file-name (string-append name "-" version ".tar.gz")) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"1cssqbg03fjb6xwf7idv1l3jjsh9r5r232ryi11czqlxfiv658bj")))) "0pgyf9vfcahb495q01hi1mvkmv846w4rj6zyf52is8x7sjj7x44s"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(home-page "https://github.com/mhayashi1120/Emacs-wgrep") (home-page "https://github.com/mhayashi1120/Emacs-wgrep")
(synopsis "Edit a grep buffer and apply those changes to the files") (synopsis "Edit a grep buffer and apply those changes to the files")
@ -6760,7 +6767,7 @@ notifications.")
(define-public emacs-alert (define-public emacs-alert
(package (package
(name "emacs-alert") (name "emacs-alert")
(version "1.2") (version "1.3")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
@ -6769,7 +6776,7 @@ notifications.")
(commit (string-append "v" version)))) (commit (string-append "v" version))))
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 "1vpc3q40m6dcrslki4bg725j4kv6c6xfxwjjl1ilg7la49fwwf26")))) (base32 "0lc0p5cl4hfrzw1z2ghb11k1lvljn5m08jw5fmgwgxv667kwh49r"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(propagated-inputs (propagated-inputs
`(("emacs-gntp" ,emacs-gntp) `(("emacs-gntp" ,emacs-gntp)
@ -6783,8 +6790,8 @@ customizable by the user.")
(license license:gpl2+))) (license license:gpl2+)))
(define-public emacs-zones (define-public emacs-zones
(let ((commit "353fc38a6544eb59887bee045e373406f1d038a5") (let ((commit "3169815c323966ff8e252b44e3558d6d045243fe")
(revision "1")) (revision "2"))
(package (package
(name "emacs-zones") (name "emacs-zones")
(version (git-version "0" revision commit)) (version (git-version "0" revision commit))
@ -6797,7 +6804,7 @@ customizable by the user.")
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"0gwnw2giii2a14nlh62xp45f47cw6ikqphhzpmcw6c7mn9x5z2ar")) "039msns5596rz0my7fxpanpxwg1lkhpiibm9ppnlzaajx1hszbzl"))
(patches (patches
(search-patches (search-patches
"emacs-zones-called-interactively.patch")))) "emacs-zones-called-interactively.patch"))))
@ -7589,15 +7596,17 @@ and cangjie.")
(define-public emacs-posframe (define-public emacs-posframe
(package (package
(name "emacs-posframe") (name "emacs-posframe")
(version "0.4.2") (version "0.5.0")
(source (source
(origin (origin
(method url-fetch) (method git-fetch)
(uri (string-append (uri (git-reference
"https://elpa.gnu.org/packages/posframe-" version ".el")) (url "https://github.com/tumashu/posframe")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"1h8vvxvsg41vc1nnglqjs2q0k1yzfsn72skga9s76qa3zxmx6kds")))) "1fhjxj7gi2pj5rdnmf0gddiwd8iifgjgjp01c01npz1gwwixyqh3"))))
(build-system emacs-build-system) (build-system emacs-build-system)
;; emacs-minimal does not include the function font-info ;; emacs-minimal does not include the function font-info
(arguments `(#:emacs ,emacs)) (arguments `(#:emacs ,emacs))
@ -7878,6 +7887,37 @@ other operations.")
on mouse-control.") on mouse-control.")
(license license:gpl3+))) (license license:gpl3+)))
(define-public emacs-gnugo
(package
(name "emacs-gnugo")
(version "3.1.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://elpa.gnu.org/packages/gnugo-"
version ".tar"))
(sha256
(base32
"0xpjvs250gg71qwapdsb1hlc61gs0gpkjds01srf784fvyxx2gf1"))))
(build-system emacs-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(add-after 'unpack 'configure-default-gnugo-xpms-variable
(lambda _
(substitute* "gnugo.el"
(("defvar gnugo-xpms nil")
"defvar gnugo-xpms #'gnugo-imgen-create-xpms"))
#t)))))
(propagated-inputs
`(("emacs-ascii-art-to-unicode" ,emacs-ascii-art-to-unicode)
("emacs-xpm" ,emacs-xpm)))
(home-page "https://elpa.gnu.org/packages/gnugo.html")
(synopsis "Emacs major mode for playing GNU Go")
(description "This package provides an Emacs based interface for GNU Go.
It has a graphical mode where the board and stones are drawn using XPM images
and supports the use of a mouse.")
(license license:gpl3+)))
(define-public emacs-gnuplot (define-public emacs-gnuplot
(package (package
(name "emacs-gnuplot") (name "emacs-gnuplot")
@ -7962,20 +8002,20 @@ pressed simultaneously or a single key quickly pressed twice.")
(define-public emacs-evil-surround (define-public emacs-evil-surround
(package (package
(name "emacs-evil-surround") (name "emacs-evil-surround")
(version "1.0.0") (version "1.0.4")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
(uri (git-reference (uri (git-reference
(url "https://github.com/timcharper/evil-surround.git") (url "https://github.com/emacs-evil/evil-surround")
(commit (string-append "v" version)))) (commit version)))
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 "1smv7sqhm1l2bi9fmispnlmjssidblwkmiiycj1n3ag54q27z031")))) (base32 "1ajsi6xn8mliwzl24h6pp9rd91z7f20yvkphr9q7k6zpjrd7fb9q"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(propagated-inputs (propagated-inputs
`(("emacs-evil" ,emacs-evil))) `(("emacs-evil" ,emacs-evil)))
(home-page "https://github.com/timcharper/evil-surround") (home-page "https://github.com/emacs-evil/evil-surround")
(synopsis "Easily modify surrounding parentheses and quotes") (synopsis "Easily modify surrounding parentheses and quotes")
(description "@code{emacs-evil-surround} allows easy deletion, change and (description "@code{emacs-evil-surround} allows easy deletion, change and
addition of surrounding pairs, such as parentheses and quotes, in evil mode.") addition of surrounding pairs, such as parentheses and quotes, in evil mode.")
@ -8636,13 +8676,13 @@ created by @code{git format-patch}, from @code{magit}, @code{dired} and
(version "1.3.3") (version "1.3.3")
(source (source
(origin (origin
(method url-fetch) (method git-fetch)
(uri (string-append "https://github.com/leathekd/erc-hl-nicks" (uri (git-reference
"/archive/" version ".tar.gz")) (url "https://github.com/leathekd/erc-hl-nicks")
(file-name (string-append name "-" version ".tar.gz")) (commit version)))
(file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32 "0c82rxpl5v7bbxirf1ksg06xv5xcddh8nkrpj7i6nvfarwdfnk4f"))))
"1a1r2kc3688g8c2ybkpwh88kgmnqhg3h3032g2yn4zr9m0n3vpkr"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(synopsis "Nickname highlighting for Emacs ERC") (synopsis "Nickname highlighting for Emacs ERC")
(description "@code{erc-hl-nicks} highlights nicknames in ERC, an IRC (description "@code{erc-hl-nicks} highlights nicknames in ERC, an IRC
@ -8792,27 +8832,20 @@ an elisp expression.")
(define-public emacs-emojify (define-public emacs-emojify
(package (package
(name "emacs-emojify") (name "emacs-emojify")
(version "0.4") (version "1.2")
(source (source
(origin (origin
(method url-fetch) (method git-fetch)
(uri (string-append "https://github.com/iqbalansari/emacs-emojify/" (uri (git-reference
"releases/download/v" version "/emojify-" (url "https://github.com/iqbalansari/emacs-emojify")
version ".tar")) (commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"0k84v2d2bkiwcky9fi1yyprgkj46g7wh6pyl9gzmcd7sqv051d5n")))) "1fqnj5x7ivjkm5y927dqqnm85q5hzczlb0hrfpjalrhasa6ijsrm"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(arguments (arguments
`(#:phases `(#:include (cons "^data/" %default-include)))
(modify-phases %standard-phases
(add-after 'install 'install-data
(lambda* (#:key outputs #:allow-other-keys)
(copy-recursively "data"
(string-append (assoc-ref outputs "out")
"/share/emacs/site-lisp/guix.d/"
"emojify-" ,version "/data"))
#t)))))
(propagated-inputs (propagated-inputs
`(("emacs-ht" ,emacs-ht))) `(("emacs-ht" ,emacs-ht)))
(home-page "https://github.com/iqbalansari/emacs-emojify") (home-page "https://github.com/iqbalansari/emacs-emojify")
@ -8823,6 +8856,36 @@ well as Github-style emojis like @code{:smile:}. It provides a minor mode
@code{emojify-mode} to enable the display of emojis in a buffer.") @code{emojify-mode} to enable the display of emojis in a buffer.")
(license license:gpl3+))) (license license:gpl3+)))
(define-public emacs-make-it-so
(let ((commit "bc3b01d6b9ed6ff66ebbd524234f9d6df60dd4be")
(version "0.1.0")
(revision "1"))
(package
(name "emacs-make-it-so")
(version (git-version version revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/abo-abo/make-it-so")
(commit commit)))
(sha256
(base32
"0833bzlscpnkvjnrg3g54yr246afbjwri8n5wxk8drnsq6acvd8z"))))
(build-system emacs-build-system)
(arguments
`(#:include (cons "^recipes/" %default-include)))
(propagated-inputs
`(("emacs-ivy" ,emacs-ivy)))
(home-page "https://github.com/abo-abo/make-it-so")
(synopsis "Transform files with Makefile recipes")
(description "This package provides an interface for selecting from
different conversion recipes, often including tools like @code{ffmpeg} or
@code{convert}. The conversion command need only be written once, and
subsequent invocations can be readily customized. Several recipes are
included by default, and more can be readily added.")
(license license:gpl3+))))
(define-public emacs-websocket (define-public emacs-websocket
(package (package
(name "emacs-websocket") (name "emacs-websocket")
@ -9186,7 +9249,7 @@ Feautures:
(define-public emacs-evil-matchit (define-public emacs-evil-matchit
(package (package
(name "emacs-evil-matchit") (name "emacs-evil-matchit")
(version "2.2.9") (version "2.3.0")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
@ -9195,7 +9258,7 @@ Feautures:
(commit version))) (commit version)))
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 "12if45pxfndy3d7r4gd3zx4d3jk4d64fdmwkhc3y5zhqq9h9iy4c")))) (base32 "0y6q42hml7jgf060d83m7hf270h01858g5kxw12na9n4r4jjpdg1"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(propagated-inputs (propagated-inputs
`(("emacs-evil" ,emacs-evil))) `(("emacs-evil" ,emacs-evil)))
@ -9646,6 +9709,27 @@ matches\" in the mode line in various search modes. This is an Emacs port of
Anzu.zim.") Anzu.zim.")
(license license:gpl3+))) (license license:gpl3+)))
(define-public emacs-ascii-art-to-unicode
(package
(name "emacs-ascii-art-to-unicode")
(version "1.12")
(source
(origin
(method url-fetch)
(uri (string-append "https://elpa.gnu.org/packages/ascii-art-to-unicode-"
version ".el"))
(sha256
(base32
"1w9h2lyriafxj71r79774gh822cz8mry3gdfzyj6ym6v9mvqypna"))))
(build-system emacs-build-system)
(home-page "https://elpa.gnu.org/packages/ascii-art-to-unicode.html")
(synopsis "ASCII to Unicode art converter for Emacs")
(description "This Emacs package provides the commands @command{aa2u} and
@command{aa2u-rectangle}. Both of these commands can be used to convert
simple ASCII art line drawings to Unicode; the former works on the active
region of the buffer, while the latter works on rectangular selections.")
(license license:gpl3+)))
(define-public emacs-emmet-mode (define-public emacs-emmet-mode
(package (package
(name "emacs-emmet-mode") (name "emacs-emmet-mode")
@ -9758,12 +9842,13 @@ and can be consulted and modified.")
(version "0.03") (version "0.03")
(source (source
(origin (origin
(method url-fetch) (method git-fetch)
(uri (string-append "https://github.com/syohex/emacs-evil-anzu" (uri (git-reference
"/archive/" version ".tar.gz")) (url "https://github.com/syohex/emacs-evil-anzu")
(file-name (string-append name "-" version ".tar.gz")) (commit version)))
(file-name (git-file-name name version))
(sha256 (sha256
(base32 "032hh2946z529cizqsg8pm6cpn5qdj8lfk3qskmx6xv3g2ra56ns")))) (base32 "0lw7fg4gqwj30r0l6k2ni36sxqkf65zf0d0z3rxnpwbxlf8dlkrr"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(propagated-inputs (propagated-inputs
`(("emacs-evil" ,emacs-evil) `(("emacs-evil" ,emacs-evil)
@ -10106,19 +10191,18 @@ text-mode (i.e. Org-mode).")
(license license:gpl3+)))) (license license:gpl3+))))
(define-public emacs-outshine (define-public emacs-outshine
(let ((commit "5f1a6b70231d2811c522e4e5e8c89ff461b311d6"))
(package (package
(name "emacs-outshine") (name "emacs-outshine")
(version (git-version "2.0" "1" commit)) (version "3.0.1")
(source (origin (source (origin
(method git-fetch) (method git-fetch)
(uri (git-reference (uri (git-reference
(url "https://github.com/alphapapa/outshine.git") (url "https://github.com/alphapapa/outshine.git")
(commit commit))) (commit (string-append "v" version))))
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"1l9v1dfhgg7il11ifbhvcvrg3acfjk9sdxlc3lja1k54d7dp60jv")))) "1lh9f5dgdbwfyzxk6nsg1xwdjs8gc6p9mbyyhp6f8fnk3h0y88cg"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(propagated-inputs (propagated-inputs
`(("emacs-outorg" ,emacs-outorg))) `(("emacs-outorg" ,emacs-outorg)))
@ -10129,6 +10213,131 @@ text-mode (i.e. Org-mode).")
of @code{outline-minor-mode} (@code{org-mode} itself derives from of @code{outline-minor-mode} (@code{org-mode} itself derives from
outline-mode), so there is no such thing like an outshine mode, only outline-mode), so there is no such thing like an outshine mode, only
@code{outline-minor-mode} with outshine extensions loaded.") @code{outline-minor-mode} with outshine extensions loaded.")
(license license:gpl3+)))
(define-public emacs-frecency
(let ((commit "31ef9ff4af1a4fed3dcc24ea74037feea8795c87")
(version "0.1-pre")
(revision "1"))
(package
(name "emacs-frecency")
(version (git-version version revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/alphapapa/frecency.el")
(commit commit)))
(sha256
(base32
"051aihjdg3x22svaxhwylpi8i6s2x9j8syvsj1jgilgjjdy15l6j"))
(file-name (git-file-name name version))))
(build-system emacs-build-system)
(propagated-inputs
`(("emacs-a" ,emacs-a)
("emacs-dash" ,emacs-dash)))
(home-page "https://github.com/alphapapa/frecency.el")
(synopsis "Sort items by frequency and recency of access")
(description "This package provides a way of sorting items via
a heuristic based on frequency and recency.")
(license license:gpl3+))))
(define-public emacs-org-recent-headings
(package
(name "emacs-org-recent-headings")
(version "0.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/alphapapa/org-recent-headings.git")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0gsrzmg3mssh9s28yjm9m866fnhm1pcligssz1q6brga6dm6f2yy"))))
(build-system emacs-build-system)
(propagated-inputs
`(("emacs-org" ,emacs-org)
("emacs-dash" ,emacs-dash)
("emacs-frecency" ,emacs-frecency)))
(home-page "https://github.com/alphapapa/org-recent-headings")
(synopsis "Navigate to recently used Org headings and lists")
(description "This package maintains a list of recently used Org headings,
as well as functions for navigating between these headings.")
(license license:gpl3+)))
(define-public emacs-org-super-agenda
(package
(name "emacs-org-super-agenda")
(version "1.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/alphapapa/org-super-agenda")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0vzf91lsxnhwf52kvm8ycpf0wb9c8l91689vyhwgv4wz8q6cvjwp"))))
(build-system emacs-build-system)
(propagated-inputs
`(("emacs-org" ,emacs-org)
("emacs-dash" ,emacs-dash)
("emacs-ht" ,emacs-ht)
("emacs-s" ,emacs-s)))
(home-page "https://github.com/alphapapa/org-super-agenda")
(synopsis "Supercharged Org agenda")
(description "This package allows items in the Org agenda to be grouped
into sections while preserving the structure imposed by any timestamps.")
(license license:gpl3+)))
(define-public emacs-org-make-toc
(package
(name "emacs-org-make-toc")
(version "0.3")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/alphapapa/org-make-toc")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0syhj8q4pv33xgl5qa6x27yhwqvfhffw5xqp819hj4qs1ddlc7j5"))))
(build-system emacs-build-system)
(propagated-inputs
`(("emacs-org" ,emacs-org)
("emacs-dash" ,emacs-dash)
("emacs-s" ,emacs-s)))
(home-page "https://github.com/alphapapa/org-make-toc")
(synopsis "Maintain a table of contents for an Org file")
(description "This package facilitates the creation and maintenance of
tables of contents.")
(license license:gpl3+)))
(define-public emacs-org-ql
(let ((commit "0aec8ec60395197b2ef2b885c216cf84286efed9")
(version "0.1-pre")
(revision "1"))
(package
(name "emacs-org-ql")
(version (git-version version revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/alphapapa/org-ql")
(commit commit)))
(sha256
(base32
"0bj85hxhym7rvkaddcxybxdm7g7w439wij9f2w5ljz1hmvp55991"))
(file-name (git-file-name name version))))
(build-system emacs-build-system)
(propagated-inputs
`(("emacs-s" ,emacs-s)
("emacs-dash" ,emacs-dash)))
(home-page "https://github.com/alphapapa/org-ql")
(synopsis "Query language for Org buffers")
(description "This package provides a Lispy query language for Org
files, allowing for actions to be performed based on search criteria.")
(license license:gpl3+)))) (license license:gpl3+))))
(define-public emacs-parsebib (define-public emacs-parsebib
@ -11206,10 +11415,10 @@ You should really read org-ref.org in this package for details.")
;; This project is unmaintained. Please use emacs-org-re-reveal instead. ;; This project is unmaintained. Please use emacs-org-re-reveal instead.
(define-public emacs-org-reveal (define-public emacs-org-reveal
(let ((commit "1cdd088ec5fab631c564dca7f9f74fd3e9b7d4d4")) (let ((commit "9210413202a360a559a51e8275faa42be68cf44b"))
(package (package
(name "emacs-org-reveal") (name "emacs-org-reveal")
(version (git-version "0.1" "2" commit)) (version (git-version "0.1" "3" commit))
(source (origin (source (origin
(method git-fetch) (method git-fetch)
(uri (git-reference (uri (git-reference
@ -11218,7 +11427,7 @@ You should really read org-ref.org in this package for details.")
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"1vjxjadq2i74p96y9jxnqj1yb86fsgxzmn7bjgnb88ay6nvc1l72")))) "1wlfk823d3vrn480m38j7ncaqm193lvh6y22b92fx4b3yhdbndza"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(home-page "https://github.com/yjwen/org-reveal") (home-page "https://github.com/yjwen/org-reveal")
(synopsis "Org and Reveal.js powered HTML presentation tool") (synopsis "Org and Reveal.js powered HTML presentation tool")
@ -11382,7 +11591,7 @@ downloading manager for Emacs.")
(define-public emacs-helpful (define-public emacs-helpful
(package (package
(name "emacs-helpful") (name "emacs-helpful")
(version "0.15") (version "0.16")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
@ -11391,10 +11600,14 @@ downloading manager for Emacs.")
(commit version))) (commit version)))
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 "1rqnx7672175288yqaslw0d9vw04j6psw7mys8j9zcp2i72hlvkn")))) (base32 "1pzlx3galyryd3hd84hnd7r5s6yl9sdrfhy1s6dgz40glw41wmpr"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(propagated-inputs (propagated-inputs
`(("emacs-elisp-refs" ,emacs-elisp-refs))) `(("emacs-elisp-refs" ,emacs-elisp-refs)
("emacs-dash" ,emacs-dash)
("emacs-s" ,emacs-s)
("emacs-f" ,emacs-f)
("emacs-shut-up" ,emacs-shut-up)))
(home-page "https://github.com/Wilfred/helpful") (home-page "https://github.com/Wilfred/helpful")
(synopsis "More contextual information in Emacs help") (synopsis "More contextual information in Emacs help")
(description "@code{helpful} is an alternative to the built-in Emacs help (description "@code{helpful} is an alternative to the built-in Emacs help
@ -12780,10 +12993,30 @@ datastructures as needed, both for method parameters and return values, making
using XML-RPC methods fairly transparent to the Lisp code.") using XML-RPC methods fairly transparent to the Lisp code.")
(license license:gpl3+)))) (license license:gpl3+))))
(define-public emacs-xpm
(package
(name "emacs-xpm")
(version "1.0.4")
(source
(origin
(method url-fetch)
(uri (string-append "https://elpa.gnu.org/packages/xpm-"
version ".tar"))
(sha256
(base32
"075miyashh9cm3b0gk6ngld3rm8bfgnh4qxnhxmmvjgzf6a64grh"))))
(build-system emacs-build-system)
(home-page "https://elpa.gnu.org/packages/xpm.html")
(synopsis "XPM image editing mode for Emacs")
(description "This Emacs package makes editing XPM images easy (and maybe
fun). Editing is done directly on the (textual) image format, for maximal
cohesion with the Emacs Way.")
(license license:gpl3+)))
(define-public emacs-fish-completion (define-public emacs-fish-completion
(package (package
(name "emacs-fish-completion") (name "emacs-fish-completion")
(version "1.0") (version "1.1")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
@ -12793,7 +13026,7 @@ using XML-RPC methods fairly transparent to the Lisp code.")
version)) version))
(sha256 (sha256
(base32 (base32
"1hpma1c5j50ja03ibr7h1xmyv7k8j3rbvqivad47kwqhlsgw0jk0")))) "0bpvifv6c2a65nks6kvarw0hhm37fnyy74wikwf9qq1i20va0fpv"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(inputs `(("fish" ,fish))) (inputs `(("fish" ,fish)))
(arguments (arguments
@ -13593,7 +13826,7 @@ buffers – other modes on the TODO list).
(define-public emacs-magit-todos (define-public emacs-magit-todos
(package (package
(name "emacs-magit-todos") (name "emacs-magit-todos")
(version "1.1.7") (version "1.2")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
@ -13603,7 +13836,7 @@ buffers – other modes on the TODO list).
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"0qagdxpik64n4rw9scy451ws5sw00v64ri9g2dcw7b66bx2c6c6w")))) "17a18gszbypz82bj36xbfyykc4s9rz83vwmpxvlf65svhd51c0nh"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(propagated-inputs (propagated-inputs
`(("emacs-async" ,emacs-async) `(("emacs-async" ,emacs-async)
@ -14456,7 +14689,7 @@ to open SQLite databases.")
(define-public emacs-nix-mode (define-public emacs-nix-mode
(package (package
(name "emacs-nix-mode") (name "emacs-nix-mode")
(version "1.2.2") (version "1.4.1")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
@ -14465,10 +14698,11 @@ to open SQLite databases.")
(commit (string-append "v" version)))) (commit (string-append "v" version))))
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 "1vz3s2jx14nzy53f04d821n4f2s22ys5h9s7af6cnpynkwawyhhq")))) (base32 "04xpgg9nba5m1bl7ci5l456whcb8nfhsbvgxyx89bp0zqgr005q7"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(inputs (inputs
`(("emacs-company" ,emacs-company) `(("emacs-company" ,emacs-company)
("emacs-json-mode" ,emacs-json-mode)
("emacs-mmm-mode" ,emacs-mmm-mode))) ("emacs-mmm-mode" ,emacs-mmm-mode)))
(home-page "https://github.com/NixOS/nix-mode") (home-page "https://github.com/NixOS/nix-mode")
(synopsis "Emacs major mode for editing Nix expressions") (synopsis "Emacs major mode for editing Nix expressions")
@ -14665,20 +14899,19 @@ recursively. The results are cached for speed.")
(license license:gpl3+))) (license license:gpl3+)))
(define-public emacs-orgit (define-public emacs-orgit
(let ((commit "2456436a7e64d26bcf455b3890a586acaa3e7f93"))
(package (package
(name "emacs-orgit") (name "emacs-orgit")
(version (git-version "1.5.1" "2" commit)) (version "1.5.3")
(home-page "https://github.com/magit/orgit") (home-page "https://github.com/magit/orgit")
(source (origin (source (origin
(method git-fetch) (method git-fetch)
(uri (git-reference (uri (git-reference
(url home-page) (url home-page)
(commit commit))) (commit (string-append "v" version))))
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"1i52dq2ynddb1irgigr5mdwfbfd3bvm1f29jnzd7nlc0nk186nvh")))) "1ywavzki510rslsgfm0cnn3mlh644p61ha2nfb715xhkg7cd3j9g"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(propagated-inputs (propagated-inputs
`(("emacs-dash" ,emacs-dash) `(("emacs-dash" ,emacs-dash)
@ -14689,7 +14922,7 @@ used to link to certain Magit buffers. Use the command
@command{org-store-link} while such a buffer is current to store a link. @command{org-store-link} while such a buffer is current to store a link.
Later you can insert it into an Org buffer using the command Later you can insert it into an Org buffer using the command
@code{org-insert-link}.") @code{org-insert-link}.")
(license license:gpl3+)))) (license license:gpl3+)))
(define-public emacs-amx (define-public emacs-amx
(package (package
@ -15616,7 +15849,7 @@ previewed by scrolling up and down within a @code{dired} buffer.")
(define-public emacs-counsel-etags (define-public emacs-counsel-etags
(package (package
(name "emacs-counsel-etags") (name "emacs-counsel-etags")
(version "1.8.3") (version "1.8.4")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
@ -15626,7 +15859,7 @@ previewed by scrolling up and down within a @code{dired} buffer.")
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"1d8nlrbsyza6q7yqm9248bxxsf49qf6hchg3zwv0l11acn3w8np5")))) "14my9jvxl26a5yn381h5pi5481y9d9gyk7wnxxd0s4sjc964c5h5"))))
(build-system emacs-build-system) (build-system emacs-build-system)
(propagated-inputs (propagated-inputs
`(("emacs-ivy" ,emacs-ivy))) `(("emacs-ivy" ,emacs-ivy)))
@ -15636,6 +15869,32 @@ previewed by scrolling up and down within a @code{dired} buffer.")
and searching through @code{Ctags} files.") and searching through @code{Ctags} files.")
(license license:gpl3+))) (license license:gpl3+)))
(define-public emacs-org-download
(let ((commit "ac72bf8fce3e855da60687027b6b8601cf1de480")
(version "0.1.0")
(revision "1"))
(package
(name "emacs-org-download")
(version (git-version version revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/abo-abo/org-download")
(commit commit)))
(sha256
(base32
"0ax5wd44765wnwabkam1g2r62gq8crx2qq733s2mg1z72cfvwxqb"))
(file-name (git-file-name name version))))
(build-system emacs-build-system)
(propagated-inputs
`(("emacs-org" ,emacs-org)
("emacs-async" ,emacs-async)))
(home-page "https://github.com/abo-abo/org-download")
(synopsis "Facilitate moving images")
(description "This package provides utilities for managing image files
copied into @code{org-mode} buffers.")
(license license:gpl3+))))
(define-public emacs-helm-dash (define-public emacs-helm-dash
(let ((commit "192b862185df661439a06de644791171e899348a") (let ((commit "192b862185df661439a06de644791171e899348a")
(version "1.3.0") (version "1.3.0")

8
gnu/packages/emulators.scm
View File

@ -239,7 +239,7 @@ turbo speed, networked multiplayer, and graphical enhancements.")
(define-public dosbox (define-public dosbox
(package (package
(name "dosbox") (name "dosbox")
(version "0.74-2") (version "0.74-3")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://sourceforge.net/projects/dosbox" (uri (string-append "https://sourceforge.net/projects/dosbox"
@ -248,7 +248,7 @@ turbo speed, networked multiplayer, and graphical enhancements.")
(file-name (string-append name "-" version ".tar.gz")) (file-name (string-append name "-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"1ksp1b5szi0vy4x55rm3j1y9wq5mlslpy8llpg87rpdyjlsk0xvh")))) "02i648i50dwicv1vaql15rccv4g8h5blf5g6inv67lrfxpbkvlf0"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:phases (modify-phases %standard-phases `(#:phases (modify-phases %standard-phases
@ -1191,7 +1191,7 @@ play them on systems for which they were never designed!")
(define-public mame (define-public mame
(package (package
(name "mame") (name "mame")
(version "0.210") (version "0.211")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
@ -1201,7 +1201,7 @@ play them on systems for which they were never designed!")
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"08c62mc8aajzh44q36qvmrcq404hdzh3i8wwdfnvn0c4w8dbf486")) "0gbxgncbzmmplijg0c1ibwsb87fbmfvs1kjflh002yyx8yvfw83z"))
(modules '((guix build utils))) (modules '((guix build utils)))
(snippet (snippet
;; Remove bundled libraries. ;; Remove bundled libraries.

5
gnu/packages/enchant.scm
View File

@ -1,6 +1,7 @@
;;; GNU Guix --- Functional package management for GNU ;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014 Marek Benc <merkur32@gmail.com> ;;; Copyright © 2014 Marek Benc <merkur32@gmail.com>
;;; Copyright © 2018 Marius Bakke <mbakke@fastmail.com> ;;; Copyright © 2018 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -32,7 +33,7 @@
(define-public enchant (define-public enchant
(package (package
(name "enchant") (name "enchant")
(version "2.2.3") (version "2.2.4")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://github.com/AbiWord/enchant/releases" (uri (string-append "https://github.com/AbiWord/enchant/releases"
@ -40,7 +41,7 @@
version ".tar.gz")) version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"0v87p1ls0gym95qirijpclk650sjbkcjjl6ssk059zswcwaykn5b")))) "1p6a3qmrh8bjzds6x7rg9da0ir44gg804jzkf634h39wsa4vdmpm"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
'(#:configure-flags '("--disable-static" '(#:configure-flags '("--disable-static"

4
gnu/packages/finance.scm
View File

@ -399,7 +399,7 @@ other machines/servers. Electrum does not download the Bitcoin blockchain.")
(package (package
(inherit electrum) (inherit electrum)
(name "electron-cash") (name "electron-cash")
(version "4.0.1") (version "4.0.7")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
@ -410,7 +410,7 @@ other machines/servers. Electrum does not download the Bitcoin blockchain.")
".tar.gz")) ".tar.gz"))
(sha256 (sha256
(base32 (base32
"16fi03f23yb5r9s64x1a9wrxnvivlbawvrbq4d486yclzl1r7y48")) "0xswmr68cm1c77lzisi3z812jzqczm9dfrshfhdq42zz5kaz4gnn"))
(modules '((guix build utils))) (modules '((guix build utils)))
(snippet (snippet
'(begin '(begin

4
gnu/packages/flashing-tools.scm
View File

@ -48,7 +48,7 @@
(define-public flashrom (define-public flashrom
(package (package
(name "flashrom") (name "flashrom")
(version "1.0.1") (version "1.1")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append (uri (string-append
@ -56,7 +56,7 @@
version ".tar.bz2")) version ".tar.bz2"))
(sha256 (sha256
(base32 (base32
"0i6yrrl69hrqmwd7azj7x3j46m0qpvzmk3b5basym7mnlpfzhyfm")))) "06afq680n9p34hi3vrkn12vd1pfyq2062db9qqbi4hi21k3skbdf"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(inputs `(("dmidecode" ,dmidecode) (inputs `(("dmidecode" ,dmidecode)
("pciutils" ,pciutils) ("pciutils" ,pciutils)

4
gnu/packages/freedesktop.scm
View File

@ -631,7 +631,7 @@ applications, X servers (rootless or fullscreen) or other display servers.")
(define-public weston (define-public weston
(package (package
(name "weston") (name "weston")
(version "6.0.0") (version "6.0.1")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append (uri (string-append
@ -639,7 +639,7 @@ applications, X servers (rootless or fullscreen) or other display servers.")
"weston-" version ".tar.xz")) "weston-" version ".tar.xz"))
(sha256 (sha256
(base32 (base32
"04p6hal5kalmdp5dxwh2h5qhkkb4dvbsk7l091zvvcq70slj6qsl")))) "1d2m658ll8x7prlsfk71qgw89c7dz6y7d6nndfxwl49fmrd6sbxz"))))
(build-system meson-build-system) (build-system meson-build-system)
(native-inputs (native-inputs
`(("pkg-config" ,pkg-config) `(("pkg-config" ,pkg-config)

34
gnu/packages/game-development.scm
View File

@ -153,15 +153,15 @@ is used in some video games and movies.")
(define-public deutex (define-public deutex
(package (package
(name "deutex") (name "deutex")
(version "5.1.2") (version "5.2.0")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://github.com/Doom-Utils/" name (uri (string-append "https://github.com/Doom-Utils/deutex"
"/releases/download/v" version "/" "/releases/download/v" version "/"
name "-" version ".tar.xz")) "deutex-" version ".tar.xz"))
(sha256 (sha256
(base32 (base32
"1rj3w4xa0n4jixy4j7p6gbclylbgxvhdnji7xnkydrqii9rxnbp4")))) "1d536d3i78k4ch8mjg7lqnamnyfpp2x5x7mzx5smqi9ad8lb6hqz"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(native-inputs `(("asciidoc" ,asciidoc))) (native-inputs `(("asciidoc" ,asciidoc)))
(home-page "https://github.com/Doom-Utils/deutex") (home-page "https://github.com/Doom-Utils/deutex")
@ -1511,3 +1511,29 @@ added. The permanent goal is to create the open source Quake 3 distribution
upon which people base their games, ports to new platforms, and other upon which people base their games, ports to new platforms, and other
projects.") projects.")
(license license:gpl2)))) (license license:gpl2))))
(define-public openvr
(package
(name "openvr")
(version "1.4.18")
(home-page "https://github.com/ValveSoftware/openvr/")
(source
(origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0m92634j6g0f2xybbzklm79cnq20vidbk1jc62pnz12aabwixvyh"))))
(build-system cmake-build-system)
(arguments
;; No tests.
'(#:tests? #f
#:configure-flags (list "-DBUILD_SHARED=1")))
(synopsis "Virtual reality software development kit")
(description "OpenVR is an API and runtime that allows access to VR
hardware from multiple vendors without requiring that applications have
specific knowledge of the hardware they are targeting.")
(license license:bsd-3)))

73
gnu/packages/games.scm
View File

@ -42,6 +42,7 @@
;;; Copyright © 2019 Julien Lepiller <julien@lepiller.eu> ;;; Copyright © 2019 Julien Lepiller <julien@lepiller.eu>
;;; Copyright © 2019 Jesse Gibbons <jgibbons2357+guix@gmail.com> ;;; Copyright © 2019 Jesse Gibbons <jgibbons2357+guix@gmail.com>
;;; Copyright © 2019 Dan Frumin <dfrumin@cs.ru.nl> ;;; Copyright © 2019 Dan Frumin <dfrumin@cs.ru.nl>
;;; Copyright © 2019 Guillaume Le Vaillant <glv@posteo.net>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -130,6 +131,7 @@
#:use-module (gnu packages netpbm) #:use-module (gnu packages netpbm)
#:use-module (gnu packages networking) #:use-module (gnu packages networking)
#:use-module (gnu packages ocaml) #:use-module (gnu packages ocaml)
#:use-module (gnu packages opencl)
#:use-module (gnu packages pcre) #:use-module (gnu packages pcre)
#:use-module (gnu packages perl) #:use-module (gnu packages perl)
#:use-module (gnu packages perl-check) #:use-module (gnu packages perl-check)
@ -3547,7 +3549,7 @@ with the \"Stamp\" tool within Tux Paint.")
(description "SuperTux is a free classic 2D jump'n run sidescroller game (description "SuperTux is a free classic 2D jump'n run sidescroller game
in a style similar to the original Super Mario games covered under in a style similar to the original Super Mario games covered under
the GNU GPL.") the GNU GPL.")
(home-page "https://supertuxproject.org/") (home-page "https://supertux.org/")
(license license:gpl3+))) (license license:gpl3+)))
(define-public tintin++ (define-public tintin++
@ -7254,6 +7256,26 @@ the game avoids complex inventory management and character building, relying
on items and player adaptability for character progression.") on items and player adaptability for character progression.")
(license license:isc))) (license license:isc)))
(define-public harmonist-tk
(package
(inherit harmonist)
(name "harmonist-tk")
(arguments
(append
(package-arguments harmonist)
`(#:phases
(modify-phases %standard-phases
(replace 'build
(lambda _
(invoke "go" "install" "-v" "-x" "--tags" "tk"
"git.tuxfamily.org/harmonist/harmonist")))
(replace 'check
(lambda _
(invoke "go" "test" "--tags" "tk"
"git.tuxfamily.org/harmonist/harmonist")))))))
(inputs
`(("go-github.com-nsf-gothic" ,go-github.com-nsf-gothic)))))
(define-public drascula (define-public drascula
(package (package
(name "drascula") (name "drascula")
@ -7560,3 +7582,52 @@ remake of that series or any other game.")
;; released under both gpl2 and cc-by-sa3.0. Bundled Gigi library is ;; released under both gpl2 and cc-by-sa3.0. Bundled Gigi library is
;; released under lgpl2.1+. ;; released under lgpl2.1+.
(license (list license:gpl2 license:cc-by-sa3.0 license:lgpl2.1+)))) (license (list license:gpl2 license:cc-by-sa3.0 license:lgpl2.1+))))
(define-public leela-zero
(package
(name "leela-zero")
(version "0.17")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/leela-zero/leela-zero.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"17px5iny8mql5c01bymcli7zfssswkzvb2i8gnsmjcck6i2n8srl"))
(patches (search-patches "leela-zero-gtest.patch"))))
(build-system cmake-build-system)
(native-inputs
`(("googletest" ,googletest)))
(inputs
`(("boost" ,boost)
("ocl-icd" ,ocl-icd)
("openblas" ,openblas)
("opencl-headers" ,opencl-headers)
("qtbase" ,qtbase)
("zlib" ,zlib)))
(arguments
'(#:configure-flags '("-DUSE_BLAS=YES")
#:phases (modify-phases %standard-phases
(add-before 'configure 'fix-tests
(lambda* (#:key outputs #:allow-other-keys)
(let ((home (getcwd)))
(setenv "HOME" home)
(substitute* "src/tests/gtests.cpp"
(("\\.\\./src/tests/0k\\.txt")
(string-append home "/src/tests/0k.txt"))
(("cfg_gtp_mode = true;")
"cfg_gtp_mode = true; cfg_cpu_only = true;")))
#t))
(replace 'check
(lambda _
(invoke "./tests"))))))
(home-page "https://github.com/leela-zero/leela-zero")
(synopsis "Program playing the game of Go")
(description
"Leela-zero is a Go engine with no human-provided knowledge, modeled after
the AlphaGo Zero paper. The current best network weights file for the engine
can be downloaded from @url{https://zero.sjeng.org/best-network}.")
(license license:gpl3+)))

112
gnu/packages/genealogy.scm Normal file
View File

@ -0,0 +1,112 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2019 Guillaume Le Vaillant <glv@posteo.net>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu packages genealogy)
#:use-module (guix build-system python)
#:use-module (guix git-download)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
#:use-module (gnu packages fonts)
#:use-module (gnu packages freedesktop)
#:use-module (gnu packages geo)
#:use-module (gnu packages gettext)
#:use-module (gnu packages ghostscript)
#:use-module (gnu packages glib)
#:use-module (gnu packages gnome)
#:use-module (gnu packages graphviz)
#:use-module (gnu packages gtk)
#:use-module (gnu packages python)
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages sqlite)
#:use-module (gnu packages version-control))
(define-public gramps
(package
(name "gramps")
(version "5.0.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/gramps-project/gramps.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1jz1fbjj6byndvir7qxzhd2ryirrd5h2kwndxpp53xdc05z1i8g7"))))
(build-system python-build-system)
(native-inputs
`(("gettext" ,gettext-minimal)
("intltool" ,intltool)))
(inputs
`(("font-gnu-freefont-ttf" ,font-gnu-freefont-ttf)
("geocode-glib" ,geocode-glib)
("gexiv2" ,gexiv2)
("ghostscript" ,ghostscript)
("gobject-introspection" ,gobject-introspection)
("gtk+" ,gtk+)
("gtkspell3" ,gtkspell3)
("graphviz" ,graphviz)
("librsvg" ,librsvg)
("osm-gps-map" ,osm-gps-map)
("pango" ,pango)
("python-bsddb3" ,python-bsddb3)
("python-pillow" ,python-pillow)
("python-pycairo" ,python-pycairo)
("python-pygobject" ,python-pygobject)
("python-pyicu" ,python-pyicu)
("rcs" ,rcs)
("sqlite" ,sqlite)
("xdg-utils" ,xdg-utils)))
(arguments
`(#:imported-modules ((guix build glib-or-gtk-build-system)
,@%python-build-system-modules)
#:modules ((ice-9 match)
(guix build python-build-system)
((guix build glib-or-gtk-build-system) #:prefix glib-or-gtk:)
(guix build utils))
#:phases
(modify-phases %standard-phases
(add-before 'check 'set-home-for-tests
(lambda _
(setenv "HOME" (getenv "TMPDIR"))
#t))
(add-before 'wrap 'wrap-with-GI_TYPELIB_PATH
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out"))
(paths (map (match-lambda
((output . directory)
(let ((girepodir (string-append
directory
"/lib/girepository-1.0")))
(if (file-exists? girepodir)
girepodir
#f))))
inputs)))
(wrap-program (string-append out "/bin/gramps")
`("GI_TYPELIB_PATH" ":" prefix ,(filter identity paths))))
#t))
(add-after 'wrap 'glib-or-gtk-wrap
(assoc-ref glib-or-gtk:%standard-phases 'glib-or-gtk-wrap)))))
(home-page "https://gramps-project.org")
(synopsis "Genealogical research software")
(description
"Gramps is a free software project and community striving to produce
a genealogy program that is both intuitive for hobbyists and feature-complete
for professional genealogists.")
(license license:gpl2+)))

33
gnu/packages/geo.scm
View File

@ -869,3 +869,36 @@ dropping features at lower levels.")
OpenStreetMap project. They can be used to convert, filter and update OpenStreetMap project. They can be used to convert, filter and update
OpenStreetMap data files.") OpenStreetMap data files.")
(license license:agpl3))) (license license:agpl3)))
(define-public osm-gps-map
(package
(name "osm-gps-map")
(version "1.1.0")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/nzjrs/osm-gps-map/releases/download/"
version "/osm-gps-map-" version ".tar.gz"))
(sha256
(base32
"11imsf4cz1dpxdjh178k2s29axmq86rkfg1pqmn7incyxmjzhbwg"))))
(build-system gnu-build-system)
(native-inputs
`(("gnome-common" ,gnome-common)
("gtk-doc" ,gtk-doc)
("pkg-config" ,pkg-config)))
(inputs
`(("cairo" ,cairo)
("glib" ,glib)
("gobject-introspection" ,gobject-introspection)
("gtk+" ,gtk+)
("libsoup" ,libsoup)))
(home-page "https://nzjrs.github.io/osm-gps-map/")
(synopsis "GTK+ widget for displaying OpenStreetMap tiles")
(description
"This package provides a GTK+ widget (and Python bindings) that when
given GPS coordinates,draws a GPS track, and points of interest on a moving
map display. Downloads map data from a number of websites, including
@url{https://www.openstreetmap.org}.")
(license license:gpl2+)))

25
gnu/packages/gl.scm
View File

@ -414,6 +414,31 @@ device drivers allows Mesa to be used in many different environments ranging
from software emulation to complete hardware acceleration for modern GPUs.") from software emulation to complete hardware acceleration for modern GPUs.")
(license license:x11))) (license license:x11)))
(define-public mesa-opencl
(package
(inherit mesa)
(name "mesa-opencl")
(arguments
(substitute-keyword-arguments (package-arguments mesa)
((#:configure-flags flags)
`(cons "-Dgallium-opencl=standalone" ,flags))))
(inputs
`(("libclc" ,libclc)
,@(package-inputs mesa)))
(native-inputs
`(("clang" ,clang)
,@(package-native-inputs mesa)))))
(define-public mesa-opencl-icd
(package
(inherit mesa-opencl)
(name "mesa-opencl-icd")
(arguments
(substitute-keyword-arguments (package-arguments mesa)
((#:configure-flags flags)
`(cons "-Dgallium-opencl=icd"
,(delete "-Dgallium-opencl=standalone" flags)))))))
(define-public mesa-headers (define-public mesa-headers
(package (package
(inherit mesa) (inherit mesa)

15
gnu/packages/gnome.scm
View File

@ -7397,8 +7397,21 @@ kill/reinice processes.")
"/pyatspi-" version ".tar.xz")) "/pyatspi-" version ".tar.xz"))
(sha256 (sha256
(base32 (base32
"0xdnix7gxzgf75xy9ris4dd6b05mqwicw190b98xqmypydyf95n6")))) "0xdnix7gxzgf75xy9ris4dd6b05mqwicw190b98xqmypydyf95n6"))
;; Patch from upstream, fixed in newer versions.
(patches (search-patches "python-pyatspi-python-37.patch"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'build 'fix-atk-load
(lambda _
(substitute* "pyatspi/__init__.py"
(("from gi.repository import Atspi")
"gi.require_version('Gtk', '3.0')
from gi.repository import Gtk
from gi.repository import Atspi"))
#t)))))
(native-inputs (native-inputs
`(("pkg-config" ,pkg-config))) `(("pkg-config" ,pkg-config)))
(inputs (inputs

18
gnu/packages/gnupg.scm
View File

@ -369,15 +369,13 @@ libskba (working with X.509 certificates and CMS data).")
(define-public gpgme (define-public gpgme
(package (package
(name "gpgme") (name "gpgme")
(version "1.13.0") (version "1.13.1")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (string-append "mirror://gnupg/gpgme/gpgme-" version (uri (string-append "mirror://gnupg/gpgme/gpgme-" version ".tar.bz2"))
".tar.bz2"))
(sha256 (sha256
(base32 (base32 "0imyjfryvvjdbai454p70zcr95m94j9xnzywrlilqdw2fqi0pqy4"))))
"0c6676g0yhfsmy32i1dgwh5cx0ja8vhcqf4k08zad177m53kxcnl"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(native-inputs (native-inputs
`(("gnupg" ,gnupg))) `(("gnupg" ,gnupg)))
@ -661,17 +659,17 @@ PGP keysigning parties.")
(define-public signing-party (define-public signing-party
(package (package
(name "signing-party") (name "signing-party")
(version "2.7") (version "2.10")
(home-page "https://salsa.debian.org/debian/signing-party") (home-page "https://salsa.debian.org/signing-party-team/signing-party")
(source (origin (source (origin
(method git-fetch) (method git-fetch)
(uri (git-reference (uri (git-reference
(url home-page) (url home-page)
(commit (string-append "release-" version)))) (commit (string-append "v" version))))
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"1gx9017wag4bgc0h7kca9n3jwwdm7z77yv3viayhg62flbwkvbgb")))) "0lq8nmwjmysry0n4jg6vb7bh0lagbyb9pa11ii3s41p1mhzchf2r"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(native-inputs (native-inputs
`(("autoconf" ,autoconf-wrapper) `(("autoconf" ,autoconf-wrapper)
@ -683,7 +681,7 @@ PGP keysigning parties.")
("perl-net-idn-encode" ,perl-net-idn-encode) ("perl-net-idn-encode" ,perl-net-idn-encode)
("libmd" ,libmd))) ("libmd" ,libmd)))
(arguments (arguments
`(#:tests? #f `(#:tests? #f ; no test suite
#:phases #:phases
(modify-phases %standard-phases (modify-phases %standard-phases
(replace 'configure (replace 'configure

4
gnu/packages/gnuzilla.scm
View File

@ -426,7 +426,7 @@ from forcing GEXP-PROMISE."
#:system system #:system system
#:guile-for-build guile))) #:guile-for-build guile)))
(define %icecat-version "60.7.0-guix2") (define %icecat-version "60.7.2-guix1")
;; 'icecat-source' is a "computed" origin that generates an IceCat tarball ;; 'icecat-source' is a "computed" origin that generates an IceCat tarball
;; from the corresponding upstream Firefox ESR tarball, using the 'makeicecat' ;; from the corresponding upstream Firefox ESR tarball, using the 'makeicecat'
@ -448,7 +448,7 @@ from forcing GEXP-PROMISE."
"firefox-" upstream-firefox-version ".source.tar.xz")) "firefox-" upstream-firefox-version ".source.tar.xz"))
(sha256 (sha256
(base32 (base32
"08x0nijh0ja5jza95a8y030ibk756bn7zlw3a3c4750yilfhqpqa")))) "1hkaq8mavmn2wphfbrlq3v56jvmvfi2nyvrkjgr28rc01jkqx4ca"))))
(upstream-icecat-base-version "60.7.0") ; maybe older than base-version (upstream-icecat-base-version "60.7.0") ; maybe older than base-version
(upstream-icecat-gnu-version "1") (upstream-icecat-gnu-version "1")

15
gnu/packages/gstreamer.scm
View File

@ -110,6 +110,7 @@ arrays of data.")
(uri (string-append (uri (string-append
"https://gstreamer.freedesktop.org/src/gstreamer/gstreamer-" "https://gstreamer.freedesktop.org/src/gstreamer/gstreamer-"
version ".tar.xz")) version ".tar.xz"))
(patches (search-patches "gstreamer-buffer-reset-offset.patch"))
(sha256 (sha256
(base32 (base32
"003wy1p1in85p9sr5jsyhbnwqaiwz069flwkhyx7qhxy31qjz3hf")))) "003wy1p1in85p9sr5jsyhbnwqaiwz069flwkhyx7qhxy31qjz3hf"))))
@ -119,19 +120,7 @@ arrays of data.")
`(#:configure-flags `(#:configure-flags
(list (string-append "--with-html-dir=" (list (string-append "--with-html-dir="
(assoc-ref %outputs "doc") (assoc-ref %outputs "doc")
"/share/gtk-doc/html")) "/share/gtk-doc/html"))))
,@(if (not (target-64bit?))
;; Skip test that fails on 32-bit systems:
;; <https://gitlab.freedesktop.org/gstreamer/gstreamer/issues/316>.
`(#:phases (modify-phases %standard-phases
(add-before 'check 'disable-gstbufferpool-test
(lambda _
(substitute* "tests/check/Makefile"
(("^[[:blank:]]+gst/gstbufferpool.*$")
""))
#t))))
'())))
(propagated-inputs `(("glib" ,glib))) ; required by gstreamer-1.0.pc. (propagated-inputs `(("glib" ,glib))) ; required by gstreamer-1.0.pc.
(native-inputs (native-inputs
`(("bison" ,bison) `(("bison" ,bison)

35
gnu/packages/gtk.scm
View File

@ -68,6 +68,7 @@
#:use-module (gnu packages icu4c) #:use-module (gnu packages icu4c)
#:use-module (gnu packages image) #:use-module (gnu packages image)
#:use-module (gnu packages libffi) #:use-module (gnu packages libffi)
#:use-module (gnu packages linux)
#:use-module (gnu packages pdf) #:use-module (gnu packages pdf)
#:use-module (gnu packages perl) #:use-module (gnu packages perl)
#:use-module (gnu packages pkg-config) #:use-module (gnu packages pkg-config)
@ -1687,7 +1688,7 @@ input.")
(origin (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://alpha.gnu.org/gnu/ssw/" (uri (string-append "https://alpha.gnu.org/gnu/ssw/"
name "-" version ".tar.gz")) "spread-sheet-widget-" version ".tar.gz"))
(sha256 (sha256
(base32 "1h93yyh2by6yrmkwqg38nd5knids05k5nqzcihc1hdwgzg3c4b8y")))) (base32 "1h93yyh2by6yrmkwqg38nd5knids05k5nqzcihc1hdwgzg3c4b8y"))))
(build-system gnu-build-system) (build-system gnu-build-system)
@ -1706,6 +1707,38 @@ viewing and manipulating 2 dimensional tabular data in a manner similar to many
popular spread sheet programs.") popular spread sheet programs.")
(license license:gpl3+))) (license license:gpl3+)))
(define-public volumeicon
(package
(name "volumeicon")
(version "0.5.1")
(source
(origin
(method url-fetch)
(uri (string-append "http://nullwise.com/files/volumeicon/volumeicon-"
version ".tar.gz"))
(sha256
(base32 "182xl2w8syv6ky2h2bc9imc6ap8pzh0p7rp63hh8nw0xm38c3f14"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags
(list "--enable-notify"))) ; optional libnotify support
(native-inputs
`(("intltool" ,intltool)
("pkg-config" ,pkg-config)))
(inputs
`(("alsa-lib" ,alsa-lib)
("gtk+" ,gtk+)
("libnotify" ,libnotify)))
(home-page "http://nullwise.com/volumeicon.html")
(synopsis "System tray volume applet")
(description
"Volume Icon is a volume indicator and control applet for @acronym{the
Advanced Linux Sound Architecture, ALSA}. It sits in the system tray,
independent of your desktop environment, and supports global key bindings.")
(license (list license:expat ; src/{bind.c,keybinder.h}
license:isc ; src/alsa_volume_mapping.c
license:gpl3)))) ; the rest & combined work
(define-public yad (define-public yad
(package (package
(name "yad") (name "yad")

66
gnu/packages/guile-xyz.scm
View File

@ -2123,7 +2123,14 @@ chunks can be expressions as well as simple tokens.")
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"0z5nf377wh8yj6n3sx2ddn4bdx1qrqnw899dlqjhg0q69qzil522")))) "0z5nf377wh8yj6n3sx2ddn4bdx1qrqnw899dlqjhg0q69qzil522"))
(modules '((guix build utils)))
(snippet
'(begin
;; Install .go files in the right place.
(substitute* "Makefile.am"
(("/ccache") "/site-ccache"))
#t))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:phases `(#:phases
@ -2163,8 +2170,8 @@ serializing continuations or delimited continuations.")
(license license:lgpl2.0+)))) (license license:lgpl2.0+))))
(define-public python-on-guile (define-public python-on-guile
(let ((commit "058c596cd3886447da31171e1026d4d19f5f5313") (let ((commit "00a51a23247f1edc4ae8eda72b30df5cd7d0015f")
(revision "2")) (revision "3"))
(package (package
(name "python-on-guile") (name "python-on-guile")
(version (git-version "0.1.0" revision commit)) (version (git-version "0.1.0" revision commit))
@ -2176,16 +2183,27 @@ serializing continuations or delimited continuations.")
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"0ppyh5kkhsph5kc091p2b5a3alnj3wnlx8jr5xpyhrsj0vx9cqph")))) "03rpnqr08rqr3gay128g564rwk8w4jbj28ss6b46z1d4vjs4nk68"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:parallel-build? #f ; not supported `(#:parallel-build? #f ; not supported
#:make-flags #:make-flags '("GUILE_AUTO_COMPILE=0") ;to prevent guild warnings
'("GUILE_AUTO_COMPILE=0") ; to prevent guild errors
#:phases #:phases
(modify-phases %standard-phases (modify-phases %standard-phases
(add-after 'unpack 'chdir (add-after 'unpack 'chdir
(lambda _ (chdir "modules") #t))))) (lambda _ (chdir "modules") #t))
(add-after 'install 'wrap
(lambda* (#:key outputs #:allow-other-keys)
;; Wrap the 'python' executable so it can find its
;; dependencies.
(let ((out (assoc-ref outputs "out")))
(wrap-program (string-append out "/bin/python")
`("GUILE_LOAD_PATH" ":" prefix
(,(getenv "GUILE_LOAD_PATH")))
`("GUILE_LOAD_COMPILED_PATH" ":" prefix
(,(getenv "GUILE_LOAD_COMPILED_PATH"))))
#t))))))
(inputs (inputs
`(("guile" ,guile-2.2))) `(("guile" ,guile-2.2)))
(propagated-inputs (propagated-inputs
@ -2384,3 +2402,37 @@ and minor modes, etc., and can also be used as a pure Guile library. It
comes with a simple counter example using GLUT and browser examples in C comes with a simple counter example using GLUT and browser examples in C
using gtk+-3 and webkitgtk.") using gtk+-3 and webkitgtk.")
(license license:gpl3+)))) (license license:gpl3+))))
(define-public guile-jpeg
(let ((commit "6a1673578b297c2c1b28e44a76bd5c49e76a5046")
(revision "0"))
(package
(name "guile-jpeg")
(version (git-version "0.0" revision commit))
(home-page "https://gitlab.com/wingo/guile-jpeg")
(source (origin
(method git-fetch)
(uri (git-reference (url home-page)
(commit commit)))
(sha256
(base32
"05z9m408w3h6aqb5k3r3qa7khir0k10rxwvsrzhkcq1hr5vbmr4m"))
(file-name (git-file-name name version))
(modules '((guix build utils)))
(snippet
'(begin
;; Install .go files in the right place.
(substitute* "Makefile.am"
(("/ccache") "/site-ccache"))
#t))))
(build-system gnu-build-system)
(native-inputs
`(("autoconf" ,autoconf)
("automake" ,automake)
("pkg-config" ,pkg-config)
("guile" ,guile-2.2)))
(synopsis "JPEG file parsing library for Guile")
(description
"Guile-JPEG is a Scheme library to parse JPEG image files and to
perform geometrical transforms on JPEG images.")
(license license:gpl3+))))

24
gnu/packages/image.scm
View File

@ -1040,27 +1040,19 @@ channels.")
(define-public exiv2 (define-public exiv2
(package (package
(name "exiv2") (name "exiv2")
(version "0.26") (version "0.27.1")
(source (origin (source
(origin
(method url-fetch) (method url-fetch)
(uri (list (string-append "https://www.exiv2.org/builds/exiv2-" (uri (string-append "https://www.exiv2.org/builds/exiv2-" version
version "-trunk.tar.gz") "-Source.tar.gz"))
(string-append "https://www.exiv2.org/exiv2-"
version ".tar.gz")
(string-append "https://fossies.org/linux/misc/exiv2-"
version ".tar.gz")))
(patches (search-patches "exiv2-CVE-2017-14860.patch"
"exiv2-CVE-2017-14859-14862-14864.patch"))
(sha256 (sha256
(base32 (base32 "109hbfk63dh14fz20ivq20gcclb9jj9jmh48w4lcn6zxh1ljh9gi"))))
"1yza317qxd8yshvqnay164imm0ks7cvij8y8j86p1gqi1153qpn7")))) (build-system cmake-build-system)
(build-system gnu-build-system) (arguments '(#:tests? #f)) ; no test suite
(arguments '(#:tests? #f)) ; no `check' target
(propagated-inputs (propagated-inputs
`(("expat" ,expat) `(("expat" ,expat)
("zlib" ,zlib))) ("zlib" ,zlib)))
(native-inputs
`(("intltool" ,intltool)))
(home-page "https://www.exiv2.org/") (home-page "https://www.exiv2.org/")
(synopsis "Library and command-line utility to manage image metadata") (synopsis "Library and command-line utility to manage image metadata")
(description (description

44
gnu/packages/java.scm
View File

@ -2096,6 +2096,50 @@ new Date();"))
"This package provides the Java development kit OpenJDK.") "This package provides the Java development kit OpenJDK.")
(license license:gpl2+))) (license license:gpl2+)))
(define-public openjdk12
(package
(inherit openjdk11)
(name "openjdk")
(version "12.33")
(source (origin
(method url-fetch)
(uri "http://hg.openjdk.java.net/jdk/jdk/archive/0276cba45aac.tar.bz2")
(file-name (string-append name "-" version ".tar.bz2"))
(sha256
(base32
"0mbhdrk12b6878kby0flnbak7444dlpm0ihlmf92vk59y1c02bc2"))
(modules '((guix build utils)))
(snippet
`(begin
(for-each delete-file (find-files "." ".*.bin$"))
(for-each delete-file (find-files "." ".*.exe$"))
(for-each delete-file (find-files "." ".*.jar$"))
#t))))
(inputs
`(("alsa-lib" ,alsa-lib)
("cups" ,cups)
("fontconfig" ,fontconfig)
("freetype" ,freetype)
("giflib" ,giflib)
("lcms" ,lcms)
("libjpeg" ,libjpeg)
("libpng" ,libpng)
("libx11" ,libx11)
("libxext" ,libxext)
("libxrandr" ,libxrandr)
("libxrender" ,libxrender)
("libxt" ,libxt)
("libxtst" ,libxtst)))
(native-inputs
`(("autoconf" ,autoconf)
("openjdk11" ,openjdk11)
("openjdk11:jdk" ,openjdk11 "jdk")
("pkg-config" ,pkg-config)
("unzip" ,unzip)
("which" ,which)
("zip" ,zip)))
(home-page "https://openjdk.java.net/projects/jdk/12")))
(define-public icedtea icedtea-8) (define-public icedtea icedtea-8)

51
gnu/packages/kde.scm
View File

@ -4,6 +4,7 @@
;;; Copyright © 2017, 2018 Mark Meyer <mark@ofosos.org> ;;; Copyright © 2017, 2018 Mark Meyer <mark@ofosos.org>
;;; Copyright © 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Gábor Boskovits <boskovits@gmail.com> ;;; Copyright © 2018 Gábor Boskovits <boskovits@gmail.com>
;;; Copyright © 2019 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -319,29 +320,21 @@ plugins, as well as code to create plugins, or complete applications.")
(define-public krita (define-public krita
(package (package
(name "krita") (name "krita")
(version "4.1.7.101") (version "4.2.2")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append (uri (string-append
"mirror://kde/stable/krita/" "mirror://kde/stable/krita/"
(version-prefix version 3) (version-prefix version 3)
"/" name "-" version ".tar.gz")) "/krita-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"0pvghb17vj3y19wa1n1zfg3yl5206ir3y45znrgdgdw076m5pjav")))) "1pzk5bqp3kh22djhvsvmsc7ybirs4hsnkpg1y9677m2gxwbqnnps"))))
(build-system cmake-build-system) (build-system cmake-build-system)
(arguments (arguments
`(#:tests? #f `(#:tests? #f
#:configure-flags #:configure-flags
(list "-DBUILD_TESTING=OFF" "-DKDE4_BUILD_TESTS=OFF" (list "-DBUILD_TESTING=OFF"
(string-append "-DWITH_FFTW3="
(assoc-ref %build-inputs "fftw"))
(string-append "-DWITH_GSL="
(assoc-ref %build-inputs "gsl"))
(string-append "-DWITH_LibRaw="
(assoc-ref %build-inputs "libraw"))
(string-append "-DWITH_TIFF="
(assoc-ref %build-inputs "libtiff"))
(string-append "-DCMAKE_CXX_FLAGS=-I" (string-append "-DCMAKE_CXX_FLAGS=-I"
(assoc-ref %build-inputs "ilmbase") (assoc-ref %build-inputs "ilmbase")
"/include/OpenEXR")) "/include/OpenEXR"))
@ -366,14 +359,15 @@ plugins, as well as code to create plugins, or complete applications.")
("extra-cmake-modules" ,extra-cmake-modules) ("extra-cmake-modules" ,extra-cmake-modules)
("gettext-minimal" ,gettext-minimal) ("gettext-minimal" ,gettext-minimal)
("kitemmodels" ,kitemmodels) ("kitemmodels" ,kitemmodels)
("pkg-config" ,pkg-config)
("qwt" ,qwt) ("qwt" ,qwt)
("vc" ,vc))) ("vc" ,vc)))
(inputs (inputs
`(("qtbase" ,qtbase) `(("boost" ,boost)
("qtdeclarative" ,qtdeclarative) ("exiv2" ,exiv2)
("qtmultimedia" ,qtmultimedia) ("fftw" ,fftw)
("qtx11extras" ,qtx11extras) ("gsl" ,gsl)
("qtsvg" ,qtsvg) ("ilmbase" ,ilmbase)
("karchive" ,karchive) ("karchive" ,karchive)
("kcompletion" ,kcompletion) ("kcompletion" ,kcompletion)
("kconfig" ,kconfig) ("kconfig" ,kconfig)
@ -387,23 +381,24 @@ plugins, as well as code to create plugins, or complete applications.")
("kwidgetsaddons" ,kwidgetsaddons) ("kwidgetsaddons" ,kwidgetsaddons)
("kwindowsystem" ,kwindowsystem) ("kwindowsystem" ,kwindowsystem)
("kxmlgui" ,kxmlgui) ("kxmlgui" ,kxmlgui)
("boost" ,boost)
("exiv2" ,exiv2)
("lcms" ,lcms) ("lcms" ,lcms)
("libpng" ,libpng)
("libjpeg-turbo" ,libjpeg-turbo) ("libjpeg-turbo" ,libjpeg-turbo)
("zlib" ,zlib) ("libpng" ,libpng)
("libraw" ,libraw-0.18)
("libtiff" ,libtiff)
("libx11" ,libx11) ("libx11" ,libx11)
("libxcb" ,libxcb) ("libxcb" ,libxcb)
("libxi" ,libxi) ("libxi" ,libxi)
("fftw" ,fftw) ("openexr" ,openexr)
("gsl" ,gsl)
("poppler-qt5" ,poppler-qt5)
("libraw" ,libraw-0.18)
("libtiff" ,libtiff)
("perl" ,perl) ("perl" ,perl)
("ilmbase" ,ilmbase) ("poppler-qt5" ,poppler-qt5)
("openexr" ,openexr))) ("qtbase" ,qtbase)
("qtdeclarative" ,qtdeclarative)
("qtmultimedia" ,qtmultimedia)
("qtsvg" ,qtsvg)
("qtx11extras" ,qtx11extras)
("quazip" ,quazip)
("zlib" ,zlib)))
(home-page "https://krita.org") (home-page "https://krita.org")
(synopsis "Digital painting application") (synopsis "Digital painting application")
(description (description

20
gnu/packages/linux.scm
View File

@ -430,8 +430,8 @@ for ARCH and optionally VARIANT, or #f if there is no such configuration."
It has been modified to remove all non-free binary blobs.") It has been modified to remove all non-free binary blobs.")
(license license:gpl2))) (license license:gpl2)))
(define %linux-libre-version "5.1.11") (define %linux-libre-version "5.1.15")
(define %linux-libre-hash "15hmqycsggqd9bwrf229b7f0pfznzs03kpzcwrd9j867pvgwyl8c") (define %linux-libre-hash "1f0hhyjsm4bl7k7w88aifvhmqmjkvkvlpd2b69y7s6csr22fk6v4")
(define %linux-libre-5.1-patches (define %linux-libre-5.1-patches
(list %boot-logo-patch (list %boot-logo-patch
@ -448,8 +448,8 @@ It has been modified to remove all non-free binary blobs.")
(make-linux-libre-headers %linux-libre-version (make-linux-libre-headers %linux-libre-version
%linux-libre-hash)) %linux-libre-hash))
(define %linux-libre-4.19-version "4.19.52") (define %linux-libre-4.19-version "4.19.56")
(define %linux-libre-4.19-hash "1wsrgrskmvipm7j4kzir93p9dp3iy49522163ghfxx71b1b2v4dg") (define %linux-libre-4.19-hash "1zqiic55viy065lhnkmhn33sz3bbbr2ykbm5f92yzd8lpc9zl7yx")
(define %linux-libre-4.19-patches (define %linux-libre-4.19-patches
(list %boot-logo-patch (list %boot-logo-patch
@ -466,8 +466,8 @@ It has been modified to remove all non-free binary blobs.")
(make-linux-libre-headers %linux-libre-4.19-version (make-linux-libre-headers %linux-libre-4.19-version
%linux-libre-4.19-hash)) %linux-libre-4.19-hash))
(define %linux-libre-4.14-version "4.14.127") (define %linux-libre-4.14-version "4.14.131")
(define %linux-libre-4.14-hash "0dkzgxfzzc6n3k2x8nzzx98c6y3fhsr695rm46ahvg7fdg3vgcmi") (define %linux-libre-4.14-hash "1qcf4cg83zpjirkj8l09y07x4zzskypngampvfw7zyazynwwgs1i")
(define-public linux-libre-4.14 (define-public linux-libre-4.14
(make-linux-libre %linux-libre-4.14-version (make-linux-libre %linux-libre-4.14-version
@ -480,14 +480,14 @@ It has been modified to remove all non-free binary blobs.")
%linux-libre-4.14-hash)) %linux-libre-4.14-hash))
(define-public linux-libre-4.9 (define-public linux-libre-4.9
(make-linux-libre "4.9.182" (make-linux-libre "4.9.184"
"1615v8ywwdm204bimq2cf6qv0zas14yagpr8lk9a5zqxas4p4rns" "0q3ggndwf0rwsb3xv33zl9awkd1803h2l9b4g6d6ps3f2sjxwxwa"
'("x86_64-linux" "i686-linux") '("x86_64-linux" "i686-linux")
#:configuration-file kernel-config)) #:configuration-file kernel-config))
(define-public linux-libre-4.4 (define-public linux-libre-4.4
(make-linux-libre "4.4.182" (make-linux-libre "4.4.184"
"0ggs5pyjr7a9mldskfbsybzxlb3lmfbhxg5q2qpzxnh1c8wcn53h" "05v295wk9fid17n5plkx6p9nwz6dvpcn2r7khwsq30sy3pg0vxv5"
'("x86_64-linux" "i686-linux") '("x86_64-linux" "i686-linux")
#:configuration-file kernel-config #:configuration-file kernel-config
#:extra-options #:extra-options

627
gnu/packages/lisp.scm
View File

@ -47,6 +47,7 @@
#:use-module (gnu packages base) #:use-module (gnu packages base)
#:use-module (gnu packages bdw-gc) #:use-module (gnu packages bdw-gc)
#:use-module (gnu packages bison) #:use-module (gnu packages bison)
#:use-module (gnu packages c)
#:use-module (gnu packages compression) #:use-module (gnu packages compression)
#:use-module (gnu packages ed) #:use-module (gnu packages ed)
#:use-module (gnu packages flex) #:use-module (gnu packages flex)
@ -65,6 +66,8 @@
#:use-module (gnu packages linux) #:use-module (gnu packages linux)
#:use-module (gnu packages perl) #:use-module (gnu packages perl)
#:use-module (gnu packages pkg-config) #:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages readline) #:use-module (gnu packages readline)
#:use-module (gnu packages sdl) #:use-module (gnu packages sdl)
#:use-module (gnu packages sqlite) #:use-module (gnu packages sqlite)
@ -5369,3 +5372,627 @@ command line, to data scanning and extracting scripts, to full application
development in a wide-range of areas.") development in a wide-range of areas.")
(home-page "https://nongnu.org/txr/") (home-page "https://nongnu.org/txr/")
(license license:bsd-2))) (license license:bsd-2)))
(define-public sbcl-clunit
(let ((commit "6f6d72873f0e1207f037470105969384f8380628")
(revision "1"))
(package
(name "sbcl-clunit")
(version (git-version "0.2.3" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/tgutu/clunit.git")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1idf2xnqzlhi8rbrqmzpmb3i1l6pbdzhhajkmhwbp6qjkmxa4h85"))))
(build-system asdf-build-system/sbcl)
(synopsis "CLUnit is a Common Lisp unit testing framework")
(description
"CLUnit is a Common Lisp unit testing framework. It is designed
to be easy to use so that you can quickly start testing. CLUnit
provides a rich set of features aimed at improving your unit testing
experience.")
(home-page "http://tgutu.github.io/clunit/")
;; MIT License
(license license:expat))))
(define-public cl-clunit
(sbcl-package->cl-source-package sbcl-clunit))
(define-public ecl-clunit
(sbcl-package->ecl-package sbcl-clunit))
(define-public sbcl-py4cl
(let ((commit "4c8a2b0814fd311f978964f825ce012290f60136")
(revision "1"))
(package
(name "sbcl-py4cl")
(version (git-version "0.0.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/bendudson/py4cl.git")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"15mk7qdqjkj56gdnbyrdyz6r7m1h26ldvn6ch96pmvg5vmr1m45r"))
(modules '((guix build utils)))))
(build-system asdf-build-system/sbcl)
(native-inputs
`(("sbcl-clunit" ,sbcl-clunit)))
(inputs
`(("sbcl-trivial-garbage" ,sbcl-trivial-garbage)))
(propagated-inputs
;; This package doesn't do anything without python available
`(("python" ,python)
;; For multi-dimensional array support
("python-numpy" ,python-numpy)))
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'replace-*base-directory*-var
(lambda* (#:key outputs #:allow-other-keys)
;; In the ASD, the author makes an attempt to
;; programatically determine the location of the
;; source-code so lisp can call into "py4cl.py". We can
;; hard-code this since we know where this file will
;; reside.
(substitute* "src/callpython.lisp"
(("py4cl/config:\\*base-directory\\*")
(string-append
"\""
(assoc-ref outputs "out")
"/share/common-lisp/sbcl-source/py4cl/"
"\""))))))))
(synopsis "Call python from Common Lisp")
(description
"Py4CL is a bridge between Common Lisp and Python, which enables Common
Lisp to interact with Python code. It uses streams to communicate with a
separate python process, the approach taken by cl4py. This is different to
the CFFI approach used by burgled-batteries, but has the same goal.")
(home-page "https://github.com/bendudson/py4cl")
;; MIT License
(license license:expat))))
(define-public cl-py4cl
(sbcl-package->cl-source-package sbcl-py4cl))
(define-public ecl-py4cl
(sbcl-package->ecl-package sbcl-py4cl))
(define-public sbcl-parse-declarations
(package
(name "sbcl-parse-declarations")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (string-append
"http://beta.quicklisp.org/archive/parse-declarations/"
"2010-10-06/parse-declarations-20101006-darcs.tgz"))
(sha256
(base32
"0r85b0jfacd28kr65kw9c13dx4i6id1dpmby68zjy63mqbnyawrd"))))
(build-system asdf-build-system/sbcl)
(arguments
`(#:asd-file "parse-declarations-1.0.asd"
#:asd-system-name "parse-declarations-1.0"))
(home-page "https://common-lisp.net/project/parse-declarations/")
(synopsis "Parse, filter, and build declarations")
(description
"Parse-Declarations is a Common Lisp library to help writing
macros which establish bindings. To be semantically correct, such
macros must take user declarations into account, as these may affect
the bindings they establish. Yet the ANSI standard of Common Lisp does
not provide any operators to work with declarations in a convenient,
high-level way. This library provides such operators.")
;; MIT License
(license license:expat)))
(define-public cl-parse-declarations
(sbcl-package->cl-source-package sbcl-parse-declarations))
(define-public ecl-parse-declarations
(sbcl-package->ecl-package sbcl-parse-declarations))
(define-public sbcl-cl-quickcheck
(let ((commit "807b2792a30c883a2fbecea8e7db355b50ba662f")
(revision "1"))
(package
(name "sbcl-cl-quickcheck")
(version (git-version "0.0.4" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/mcandre/cl-quickcheck.git")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"165lhypq5xkcys6hvzb3jq7ywnmqvzaflda29qk2cbs3ggas4767"))))
(build-system asdf-build-system/sbcl)
(synopsis
"Common Lisp port of the QuickCheck unit test framework")
(description
"Common Lisp port of the QuickCheck unit test framework")
(home-page "https://github.com/mcandre/cl-quickcheck")
;; MIT
(license license:expat))))
(define-public cl-cl-quickcheck
(sbcl-package->cl-source-package sbcl-cl-quickcheck))
(define-public ecl-cl-quickcheck
(sbcl-package->ecl-package sbcl-cl-quickcheck))
(define-public sbcl-burgled-batteries3
(let ((commit "9c0f6667e1a71ddf77e21793a0bea524710fef6e")
(revision "1"))
(package
(name "sbcl-burgled-batteries3")
(version (git-version "0.0.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/snmsts/burgled-batteries3.git")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0b726kz2xxcg5l930gz035rsdvhxrzmp05iwfwympnb4z4ammicb"))))
(build-system asdf-build-system/sbcl)
(arguments
'(#:tests? #f
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'set-*cpython-include-dir*-var
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "grovel-include-dir.lisp"
(("\\(defparameter \\*cpython-include-dir\\* \\(detect-python\\)\\)")
(string-append
"(defparameter *cpython-include-dir* \""
(assoc-ref inputs "python")
"/include/python3.7m"
"\")")))
(substitute* "ffi-interface.lisp"
(("\\*cpython-lib\\*")
(format #f "'(\"~a/lib/libpython3.so\")"
(assoc-ref inputs "python"))))
#t)))))
(native-inputs
`(("python" ,python)
("sbcl-cl-fad" ,sbcl-cl-fad)
("sbcl-lift" ,sbcl-lift)
("sbcl-cl-quickcheck" ,sbcl-cl-quickcheck)))
(inputs
`(("sbcl-cffi" ,sbcl-cffi)
("sbcl-cffi-grovel" ,sbcl-cffi-grovel)
("sbcl-alexandria" , sbcl-alexandria)
("sbcl-parse-declarations-1.0" ,sbcl-parse-declarations)
("sbcl-trivial-garbage" ,sbcl-trivial-garbage)))
(synopsis "Bridge between Python and Lisp (FFI bindings, etc.)")
(description
"This package provides a shim between Python3 (specifically, the
CPython implementation of Python) and Common Lisp.")
(home-page "https://github.com/snmsts/burgled-batteries3")
;; MIT
(license license:expat))))
(define-public cl-burgled-batteries3
(sbcl-package->cl-source-package sbcl-burgled-batteries3))
(define-public ecl-burgled-batteries3
(sbcl-package->ecl-package sbcl-burgled-batteries3))
(define-public sbcl-metabang-bind
(let ((commit "c93b7f7e1c18c954c2283efd6a7fdab36746ab5e")
(revision "1"))
(package
(name "sbcl-metabang-bind")
(version (git-version "0.8.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/gwkkwg/metabang-bind.git")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0hd0kr91795v77akpbcyqiss9p0p7ypa9dznrllincnmgvsxlmf0"))))
(build-system asdf-build-system/sbcl)
(native-inputs
`(("sbcl-lift" ,sbcl-lift)))
(synopsis "Macro that generalizes @code{multiple-value-bind} etc.")
(description
"Bind extends the idea of of let and destructing to provide a uniform
syntax for all your accessor needs. It combines @code{let},
@code{destructuring-bind}, @code{with-slots}, @code{with-accessors}, structure
editing, property or association-lists, and @code{multiple-value-bind} and a
whole lot more into a single form.")
(home-page "https://common-lisp.net/project/metabang-bind/")
;; MIT License
(license license:expat))))
(define-public cl-metabang-bind
(sbcl-package->cl-source-package sbcl-metabang-bind))
(define-public ecl-metabang-bind
(sbcl-package->ecl-package sbcl-metabang-bind))
(define-public sbcl-fare-utils
(let ((commit "66e9c6f1499140bc00ccc22febf2aa528cbb5724")
(revision "1"))
(package
(name "sbcl-fare-utils")
(version (git-version "1.0.0.5" revision commit))
(source
(origin
(method git-fetch)
(uri
(git-reference
(url
"https://gitlab.common-lisp.net/frideau/fare-utils.git")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"01wsr1aap3jdzhn4hrqjbhsjx6qci9dbd3gh4gayv1p49rbg8aqr"))))
(build-system asdf-build-system/sbcl)
(arguments
`(#:test-asd-file "test/fare-utils-test.asd"))
(native-inputs
`(("sbcl-hu.dwim.stefil" ,sbcl-hu.dwim.stefil)))
(synopsis "Collection of utilities and data structures")
(description
"fare-utils is a small collection of utilities. It contains a lot of
basic everyday functions and macros.")
(home-page "https://gitlab.common-lisp.net/frideau/fare-utils")
;; MIT License
(license license:expat))))
(define-public cl-fare-utils
(sbcl-package->cl-source-package sbcl-fare-utils))
(define-public ecl-fare-utils
(sbcl-package->ecl-package sbcl-fare-utils))
(define-public sbcl-idna
(package
(name "sbcl-idna")
(build-system asdf-build-system/sbcl)
(version "0.2.2")
(home-page "https://github.com/antifuchs/idna")
(source
(origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"00nbr3mffxhlq14gg9d16pa6691s4qh35inyw76v906s77khm5a2"))))
(inputs
`(("split-sequence" ,sbcl-split-sequence)))
(synopsis "IDNA string encoding and decoding routines for Common Lisp")
(description "This Common Lisp library provides string encoding and
decoding routines for IDNA, the International Domain Names in Applications.")
(license license:expat)))
(define-public cl-idna
(sbcl-package->cl-source-package sbcl-idna))
(define-public ecl-idna
(sbcl-package->ecl-package sbcl-idna))
(define-public sbcl-swap-bytes
(package
(name "sbcl-swap-bytes")
(build-system asdf-build-system/sbcl)
(version "1.1")
(home-page "https://github.com/sionescu/swap-bytes")
(source
(origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1qysbv0jngdfkv53y874qjhcxc4qi8ixaqq6j8bzxh5z0931wv55"))))
(inputs
`(("trivial-features" ,sbcl-trivial-features)))
(native-inputs
`(("fiveam" ,sbcl-fiveam)))
(arguments
;; TODO: Tests fail, why?
`(#:tests? #f))
(synopsis "Efficient endianness conversion for Common Lisp")
(description "This Common Lisp library provides optimized byte-swapping
primitives. The library can change endianness of unsigned integers of length
1/2/4/8. Very useful in implementing various network protocols and file
formats.")
(license license:expat)))
(define-public cl-swap-bytes
(sbcl-package->cl-source-package sbcl-swap-bytes))
(define-public ecl-swap-bytes
(sbcl-package->ecl-package sbcl-swap-bytes))
(define-public sbcl-iolib.asdf
;; Latest release is from June 2017.
(let ((commit "81e20614c0d27f9605bf9766214e236fd31b99b4")
(revision "1"))
(package
(name "sbcl-iolib.asdf")
(build-system asdf-build-system/sbcl)
(version "0.8.3")
(home-page "https://github.com/sionescu/iolib")
(source
(origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1j81r0wm7nfbwl991f26s4npcy7kybzybd3m47rbxy31h0cfcmdm"))))
(inputs
`(("alexandria" ,sbcl-alexandria)))
(arguments
'(#:asd-file "iolib.asdf.asd"))
(synopsis "ASDF component classes for IOLib, a Common Lisp I/O library")
(description "IOlib is to be a better and more modern I/O library than
the standard Common Lisp library. It contains a socket library, a DNS
resolver, an I/O multiplexer(which supports @code{select(2)}, @code{epoll(4)}
and @code{kqueue(2)}), a pathname library and file-system utilities.")
(license license:expat))))
(define-public sbcl-iolib.conf
(package
(inherit sbcl-iolib.asdf)
(name "sbcl-iolib.conf")
(inputs
`(("iolib.asdf" ,sbcl-iolib.asdf)))
(arguments
'(#:asd-file "iolib.conf.asd"))
(synopsis "Compile-time configuration for IOLib, a Common Lisp I/O library")))
(define-public sbcl-iolib.common-lisp
(package
(inherit sbcl-iolib.asdf)
(name "sbcl-iolib.common-lisp")
(inputs
`(("iolib.asdf" ,sbcl-iolib.asdf)
("iolib.conf" ,sbcl-iolib.conf)))
(arguments
'(#:asd-file "iolib.common-lisp.asd"))
(synopsis "Slightly modified Common Lisp for IOLib, a Common Lisp I/O library")))
(define-public sbcl-iolib.base
(package
(inherit sbcl-iolib.asdf)
(name "sbcl-iolib.base")
(inputs
`(("iolib.asdf" ,sbcl-iolib.asdf)
("iolib.conf" ,sbcl-iolib.conf)
("iolib.common-lisp" ,sbcl-iolib.common-lisp)
("split-sequence" ,sbcl-split-sequence)))
(arguments
'(#:asd-file "iolib.base.asd"))
(synopsis "Base package for IOLib, a Common Lisp I/O library")))
(define-public sbcl-iolib.grovel
(package
(inherit sbcl-iolib.asdf)
(name "sbcl-iolib.grovel")
(inputs
`(("iolib.asdf" ,sbcl-iolib.asdf)
("iolib.conf" ,sbcl-iolib.conf)
("iolib.base", sbcl-iolib.base)
("cffi", sbcl-cffi)))
(arguments
'(#:asd-file "iolib.grovel.asd"
#:phases
(modify-phases %standard-phases
(add-after 'install 'install-header
(lambda* (#:key outputs #:allow-other-keys)
;; This header is required by sbcl-iolib.
(install-file "src/grovel/grovel-common.h"
(string-append (assoc-ref outputs "out")
"/lib/sbcl"))
#t)))))
(synopsis "CFFI Groveller for IOLib, a Common Lisp I/O library")))
(define-public sbcl-iolib
(package
(inherit sbcl-iolib.asdf)
(name "sbcl-iolib")
(inputs
`(("iolib.asdf" ,sbcl-iolib.asdf)
("iolib.conf" ,sbcl-iolib.conf)
("iolib.grovel" ,sbcl-iolib.grovel)
("iolib.base", sbcl-iolib.base)
("bordeaux-threads", sbcl-bordeaux-threads)
("idna", sbcl-idna)
("swap-bytes", sbcl-swap-bytes)
("libfixposix", libfixposix)))
(native-inputs
`(("fiveam" ,sbcl-fiveam)))
(arguments
'(#:asd-file "iolib.asd"
#:asd-system-name "iolib"
#:test-asd-file "iolib.tests.asd"
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-paths
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "src/syscalls/ffi-functions-unix.lisp"
(("\\(:default \"libfixposix\"\\)")
(string-append
"(:default \""
(assoc-ref inputs "libfixposix") "/lib/libfixposix\")")))
;; Socket tests need Internet access, disable them.
(substitute* "iolib.tests.asd"
(("\\(:file \"sockets\" :depends-on \\(\"pkgdcl\" \"defsuites\"\\)\\)")
"")))))))
(synopsis "Common Lisp I/O library")))
(define sbcl-iolib+multiplex
(package
(inherit sbcl-iolib)
(name "sbcl-iolib+multiplex")
(arguments
(substitute-keyword-arguments (package-arguments sbcl-iolib)
((#:asd-system-name _) "iolib/multiplex")))))
(define sbcl-iolib+syscalls
(package
(inherit sbcl-iolib)
(name "sbcl-iolib+syscalls")
(arguments
(substitute-keyword-arguments (package-arguments sbcl-iolib)
((#:asd-system-name _) "iolib/syscalls")))))
(define sbcl-iolib+streams
(package
(inherit sbcl-iolib)
(name "sbcl-iolib+streams")
(arguments
(substitute-keyword-arguments (package-arguments sbcl-iolib)
((#:asd-system-name _) "iolib/streams")))))
(define sbcl-iolib+sockets
(package
(inherit sbcl-iolib)
(name "sbcl-iolib+sockets")
(arguments
(substitute-keyword-arguments (package-arguments sbcl-iolib)
((#:asd-system-name _) "iolib/sockets")))))
(define-public sbcl-ieee-floats
(let ((commit "566b51a005e81ff618554b9b2f0b795d3b29398d")
(revision "1"))
(package
(name "sbcl-ieee-floats")
(build-system asdf-build-system/sbcl)
(version (git-version "20170924" revision commit))
(home-page "https://github.com/marijnh/ieee-floats/")
(source
(origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1xyj49j9x3lc84cv3dhbf9ja34ywjk1c46dklx425fxw9mkwm83m"))))
(native-inputs
`(("fiveam" ,sbcl-fiveam)))
(synopsis "IEEE 754 binary representation for floats in Common Lisp")
(description "This is a Common Lisp library that allows to convert
floating point values to IEEE 754 binary representation.")
(license license:bsd-3))))
(define sbcl-closure-common
(let ((commit "e3c5f5f454b72b01b89115e581c3c52a7e201e5c")
(revision "1"))
(package
(name "sbcl-closure-common")
(build-system asdf-build-system/sbcl)
(version (git-version "20101006" revision commit))
(home-page "https://github.com/sharplispers/closure-common")
(source
(origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0k5r2qxn122pxi301ijir3nayi9sg4d7yiy276l36qmzwhp4mg5n"))))
(inputs
`(("trivial-gray-streams" ,sbcl-trivial-gray-streams)
("babel" ,sbcl-babel)))
(synopsis "Support Common Lisp library for CXML")
(description "Closure-common is an internal helper library. The name
Closure is a reference to the web browser it was originally written for.")
;; TODO: License?
(license #f))))
(define-public sbcl-cl-reexport
(let ((commit "312f3661bbe187b5f28536cd7ec2956e91366c3b")
(revision "1"))
(package
(name "sbcl-cl-reexport")
(build-system asdf-build-system/sbcl)
(version (git-version "0.1" revision commit))
(home-page "https://github.com/takagi/cl-reexport")
(source
(origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1cwpn1m3wrl0fl9plznn7p464db646gnfc8zkyk97dyxski2aq0x"))))
(inputs
`(("alexandria" ,sbcl-alexandria)))
(arguments
;; TODO: Tests fail because cl-test-more is missing, but I can't find it online.
`(#:tests? #f))
(synopsis "HTTP cookie manager for Common Lisp")
(description "cl-cookie is a Common Lisp library featuring parsing of
cookie headers, cookie creation, cookie jar creation and more.")
(license license:llgpl))))
(define-public sbcl-cl-cookie
(let ((commit "cea55aed8b9ad25fafd13defbcb9fe8f41b29546")
(revision "1"))
(package
(name "sbcl-cl-cookie")
(build-system asdf-build-system/sbcl)
(version (git-version "0.9.10" revision commit))
(home-page "https://github.com/fukamachi/cl-cookie")
(source
(origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"090g7z75h98zvc1ldx0vh4jn4086dhjm2w30jcwkq553qmyxwl8h"))))
(inputs
`(("proc-parse" ,sbcl-proc-parse)
("alexandria" ,sbcl-alexandria)
("quri" ,sbcl-quri)
("cl-ppcre" ,sbcl-cl-ppcre)
("local-time" ,sbcl-local-time)))
(native-inputs
`(("prove-asdf" ,sbcl-prove-asdf)
("prove" ,sbcl-prove)))
(arguments
;; TODO: Tests fail because cl-cookie depends on cl-cookie-test.
`(#:tests? #f))
(synopsis "HTTP cookie manager for Common Lisp")
(description "cl-cookie is a Common Lisp library featuring parsing of
cookie headers, cookie creation, cookie jar creation and more.")
(license license:bsd-2))))

71
gnu/packages/llvm.scm
View File

@ -31,6 +31,7 @@
#:use-module (guix packages) #:use-module (guix packages)
#:use-module ((guix licenses) #:prefix license:) #:use-module ((guix licenses) #:prefix license:)
#:use-module (guix download) #:use-module (guix download)
#:use-module (guix git-download)
#:use-module (guix utils) #:use-module (guix utils)
#:use-module (guix build-system gnu) #:use-module (guix build-system gnu)
#:use-module (guix build-system cmake) #:use-module (guix build-system cmake)
@ -47,7 +48,7 @@
#:use-module (gnu packages python) #:use-module (gnu packages python)
#:use-module (gnu packages xml)) #:use-module (gnu packages xml))
(define-public llvm (define-public llvm-8
(package (package
(name "llvm") (name "llvm")
(version "8.0.0") (version "8.0.0")
@ -98,6 +99,8 @@ languages is in development. The compiler infrastructure includes mirror sets
of programming tools as well as libraries with equivalent functionality.") of programming tools as well as libraries with equivalent functionality.")
(license license:ncsa))) (license license:ncsa)))
(define-public llvm llvm-8)
(define* (clang-runtime-from-llvm llvm hash (define* (clang-runtime-from-llvm llvm hash
#:optional (patches '())) #:optional (patches '()))
(package (package
@ -273,7 +276,7 @@ code analysis tools.")
version "/libcxx-" version ".src.tar.xz")) version "/libcxx-" version ".src.tar.xz"))
(sha256 (sha256
(base32 (base32
"1wdrxg365ig0kngx52pd0n820sncp24blb0zpalc579iidhh4002")))) "1qlx3wlxrnc5cwc1fcfc2vhfsl7j4294hi8y5kxj8hy8wxsjd462"))))
(build-system cmake-build-system) (build-system cmake-build-system)
(native-inputs (native-inputs
`(("clang" ,clang) `(("clang" ,clang)
@ -285,6 +288,44 @@ code analysis tools.")
use with Clang, targeting C++11, C++14 and above.") use with Clang, targeting C++11, C++14 and above.")
(license license:expat))) (license license:expat)))
(define-public libclc
(package
(name "libclc")
(version (package-version llvm))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/llvm/llvm-project.git")
(commit (string-append "llvmorg-" version))))
(sha256
(base32
"052h16wjcnqginzp7ki4il2xmm25v9nyk0wcz7cg03gbryhl7aqa"))))
(build-system cmake-build-system)
(arguments
`(#:configure-flags
(list (string-append "-DLLVM_CLANG="
(assoc-ref %build-inputs "clang")
"/bin/clang")
(string-append "-DPYTHON="
(assoc-ref %build-inputs "python")
"/bin/python3"))
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'chdir
(lambda _ (chdir "libclc") #t)))))
(native-inputs
`(("clang" ,clang)
("llvm" ,llvm)
("python" ,python)))
(home-page "https://libclc.llvm.org")
(synopsis "Libraries for the OpenCL programming language")
(description
"This package provides an implementation of the OpenCL library
requirements according to version 1.1 of the OpenCL specification.")
;; Apache license 2.0 with LLVM exception
(license license:asl2.0)))
(define-public libomp (define-public libomp
(package (package
(name "libomp") (name "libomp")
@ -332,6 +373,28 @@ with that of libgomp, the GNU Offloading and Multi Processing Library.")
"0svk1f70hvpwrjp6x5i9kqwrqwxnmcrw5s7f4cxyd100mdd12k08" "0svk1f70hvpwrjp6x5i9kqwrqwxnmcrw5s7f4cxyd100mdd12k08"
#:patches '("clang-7.0-libc-search-path.patch"))) #:patches '("clang-7.0-libc-search-path.patch")))
(define-public llvm-7
(package
(inherit llvm)
(version "7.0.1")
(source (origin
(method url-fetch)
(uri (string-append "https://llvm.org/releases/"
version "/llvm-" version ".src.tar.xz"))
(sha256
(base32
"16s196wqzdw4pmri15hadzqgdi926zln3an2viwyq0kini6zr3d3"))))))
(define-public clang-runtime-7
(clang-runtime-from-llvm
llvm-7
"065ybd8fsc4h2hikbdyricj6pyv4r7r7kpcikhb2y5zf370xybkq"))
(define-public clang-7
(clang-from-llvm llvm-7 clang-runtime
"067lwggnbg0w1dfrps790r5l6k8n5zwhlsw7zb6zvmfpwpfn4nx4"
#:patches '("clang-7.0-libc-search-path.patch")))
(define-public llvm-6 (define-public llvm-6
(package (package
(inherit llvm) (inherit llvm)
@ -503,9 +566,9 @@ with that of libgomp, the GNU Offloading and Multi Processing Library.")
(inputs (inputs
`(("llvm" `(("llvm"
,(package ,(package
(inherit llvm) (inherit llvm-7)
(source (origin (source (origin
(inherit (package-source llvm)) (inherit (package-source llvm-7))
(patches (patches
(list (list
(origin (origin

8
gnu/packages/mail.scm
View File

@ -351,14 +351,14 @@ aliasing facilities to work just as they would on normal mail.")
(define-public mutt (define-public mutt
(package (package
(name "mutt") (name "mutt")
(version "1.12.0") (version "1.12.1")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://bitbucket.org/mutt/mutt/downloads/" (uri (string-append "https://bitbucket.org/mutt/mutt/downloads/"
"mutt-" version ".tar.gz")) "mutt-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"13zr2fpql33sdbsjsiaa952js5bvphc1x4lqsj36qyzdhj3l84na")) "0311sip2q90aqaxn7h3cck1zl98b4vifqi8bp5fsizy4dr06bi81"))
(patches (search-patches "mutt-store-references.patch")))) (patches (search-patches "mutt-store-references.patch"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(inputs (inputs
@ -1433,14 +1433,14 @@ hashing schemes plugin for @code{Dovecot}.")
(define-public isync (define-public isync
(package (package
(name "isync") (name "isync")
(version "1.3.0") (version "1.3.1")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (string-append "mirror://sourceforge/isync/isync/" (uri (string-append "mirror://sourceforge/isync/isync/"
version "/isync-" version ".tar.gz")) version "/isync-" version ".tar.gz"))
(sha256 (base32 (sha256 (base32
"173wd7x8y5sp94slzwlnb7zhgs32r57zl9xspl2rf4g3fqwmhpwd")))) "1sphd30jplii58y2zmw365bckm6pszmapcy905zhjll1sm1ldjv8"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(native-inputs (native-inputs
`(("perl" ,perl))) `(("perl" ,perl)))

6
gnu/packages/mastodon.scm
View File

@ -42,6 +42,12 @@
'(#:phases '(#:phases
(modify-phases %standard-phases (modify-phases %standard-phases
(delete 'check) (delete 'check)
;; see https://github.com/ihabunek/toot/issues/91
(add-after 'unpack 'dont-install-Makefile
(lambda _
(substitute* "setup.py"
(("data_files.*" all) ""))
#t))
(add-after 'install 'check (add-after 'install 'check
(lambda* (#:key inputs outputs #:allow-other-keys) (lambda* (#:key inputs outputs #:allow-other-keys)
(add-installed-pythonpath inputs outputs) (add-installed-pythonpath inputs outputs)

7
gnu/packages/mate.scm
View File

@ -2,7 +2,7 @@
;;; Copyright © 2016 Fabian Harfert <fhmgufs@web.de> ;;; Copyright © 2016 Fabian Harfert <fhmgufs@web.de>
;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2017 ng0 <ng0@n0.is> ;;; Copyright © 2017 ng0 <ng0@n0.is>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2019 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2019 Guy Fleury Iteriteka <hoonandon@gmail.com> ;;; Copyright © 2019 Guy Fleury Iteriteka <hoonandon@gmail.com>
;;; ;;;
@ -195,15 +195,14 @@ from Mint-X-F and Faenza-Fresh icon packs.")
(define-public mate-themes (define-public mate-themes
(package (package
(name "mate-themes") (name "mate-themes")
(version "3.22.19") (version "3.22.20")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (string-append "mirror://mate/themes/" (version-major+minor version) (uri (string-append "mirror://mate/themes/" (version-major+minor version)
"/mate-themes-" version ".tar.xz")) "/mate-themes-" version ".tar.xz"))
(sha256 (sha256
(base32 (base32 "0c3dhf8p9nc2maky4g9xr04iil9wwbdkmhpzynlc6lfg4ksqq2bx"))))
"1ycb8b8r0s8d1h1477135mynr53s5781gdb2ap8xlvj2g58492wq"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(native-inputs (native-inputs
`(("pkg-config" ,pkg-config) `(("pkg-config" ,pkg-config)

10
gnu/packages/maths.scm
View File

@ -613,14 +613,14 @@ singular value problems.")
(define-public gnuplot (define-public gnuplot
(package (package
(name "gnuplot") (name "gnuplot")
(version "5.2.6") (version "5.2.7")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "mirror://sourceforge/gnuplot/gnuplot/" (uri (string-append "mirror://sourceforge/gnuplot/gnuplot/"
version "/gnuplot-" version "/gnuplot-"
version ".tar.gz")) version ".tar.gz"))
(sha256 (sha256
(base32 "1vllgap08nhvdmc03idmkdnk9cfl2bp81hps50q1pqrr640qzp9m")))) (base32 "1vglp4la40f5dpj0zdj63zprrkyjgzy068p35bz5dqxjyczm1zlp"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(inputs `(("readline" ,readline) (inputs `(("readline" ,readline)
("cairo" ,cairo) ("cairo" ,cairo)
@ -3369,13 +3369,15 @@ packages.")
;; Use `sh', not `/bin/sh'. ;; Use `sh', not `/bin/sh'.
(substitute* (find-files "." "Makefile|configure|SpewMakeInc\\.c") (substitute* (find-files "." "Makefile|configure|SpewMakeInc\\.c")
(("/bin/sh") (("/bin/sh")
"sh")))) "sh"))
#t))
;; Fix /bin/sh in generated make files. ;; Fix /bin/sh in generated make files.
(add-after 'configure 'fix-/bin/sh-in-generated-files (add-after 'configure 'fix-/bin/sh-in-generated-files
(lambda _ (lambda _
(substitute* (find-files "." "^[Mm]ake\\.inc.*") (substitute* (find-files "." "^[Mm]ake\\.inc.*")
(("/bin/sh") (("/bin/sh")
"sh")))) "sh"))
#t))
;; ATLAS configure program does not accepts the default flags ;; ATLAS configure program does not accepts the default flags
;; passed by the 'gnu-build-system'. ;; passed by the 'gnu-build-system'.
(replace 'configure (replace 'configure

4
gnu/packages/mc.scm
View File

@ -37,14 +37,14 @@
(define-public mc (define-public mc
(package (package
(name "mc") (name "mc")
(version "4.8.22") (version "4.8.23")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (string-append "http://ftp.midnight-commander.org/mc-" (uri (string-append "http://ftp.midnight-commander.org/mc-"
version ".tar.xz")) version ".tar.xz"))
(sha256 (sha256
(base32 "060kh3dmk8fmmsibn1l815qjazzfxzbhgqggrhncz604pbbnhy7f")))) (base32 "077z7phzq3m1sxyz7li77lyzv4rjmmh3wp2vy86pnc4387kpqzyx"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(native-inputs `(("pkg-config" ,pkg-config) (native-inputs `(("pkg-config" ,pkg-config)
("perl" ,perl))) ("perl" ,perl)))

62
gnu/packages/messaging.scm
View File

@ -42,6 +42,7 @@
#:use-module (gnu packages base) #:use-module (gnu packages base)
#:use-module (gnu packages bash) #:use-module (gnu packages bash)
#:use-module (gnu packages bison) #:use-module (gnu packages bison)
#:use-module (gnu packages boost)
#:use-module (gnu packages check) #:use-module (gnu packages check)
#:use-module (gnu packages compression) #:use-module (gnu packages compression)
#:use-module (gnu packages crypto) #:use-module (gnu packages crypto)
@ -490,56 +491,43 @@ compromised.")
(define-public znc (define-public znc
(package (package
(name "znc") (name "znc")
(version "1.7.3") (version "1.7.4")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "http://znc.in/releases/archive/znc-" (uri (string-append "http://znc.in/releases/archive/znc-"
version ".tar.gz")) version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"0g8i5hsl4kinpz1wp0a2zniidv3w2sd6awq8676fds516wcc6k0y")))) "0wcvqkpin8w4i72alnn0nxnrc9ih543qs34hqpk9xmz6m0hjk8xi"))))
;; TODO: autotools support has been deprecated, and new features like i18n (build-system cmake-build-system)
;; are only supported when building with cmake.
(build-system gnu-build-system)
(arguments (arguments
`(#:phases `(#:configure-flags
(list "-DWANT_CYRUS=ON"
"-DWANT_I18N=ON"
"-DWANT_PERL=ON"
"-DWANT_PYTHON=ON")
#:phases
(modify-phases %standard-phases (modify-phases %standard-phases
(add-after 'unpack 'unpack-googletest (add-after 'unpack 'unpack-googletest
;; Copy the googletest sources to where the CMake build expects them.
(lambda* (#:key inputs #:allow-other-keys) (lambda* (#:key inputs #:allow-other-keys)
(mkdir-p "googletest") (let ((source (assoc-ref inputs "googletest-source"))
(copy-recursively (assoc-ref inputs "googletest-source") (target "third_party/googletest"))
"googletest") (mkdir-p target)
#t))) (copy-recursively source target)
#:configure-flags '("--enable-python" #t))))))
"--enable-perl"
"--enable-cyrus"
"--with-gmock=googletest/googlemock"
"--with-gtest=googletest/googletest")
#:test-target "test"))
(native-inputs (native-inputs
`(("googletest-source" `(("boost" ,boost)
;; ZNC 1.7 needs a newer, unreleased googletest (a release is planned ("gettext" ,gettext-minimal)
;; <https://github.com/google/googletest/issues/1583>, so don't update ("googletest-source" ,(package-source googletest))
;; the public GOOGLETEST to an unstable version). The commit is taken ("pkg-config" ,pkg-config)))
;; from ‘third_party/googletest’ in the ZNC git repository.
,(let ((commit "9737e63c69e94ac5777caa0bc77c77d5206467f3"))
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/google/googletest")
(commit commit)))
(file-name (git-file-name "googletest-for-znc" commit))
(sha256
(base32
"0ya36n8d62zbxk6p22yffgx43mqhx2fz41gqqwbpdshjryf3wvxj")))))
("pkg-config" ,pkg-config)
("perl" ,perl)
("python" ,python)))
(inputs (inputs
`(("openssl" ,openssl) `(("cyrus-sasl" ,cyrus-sasl)
("zlib" ,zlib)
("icu4c" ,icu4c) ("icu4c" ,icu4c)
("cyrus-sasl" ,cyrus-sasl))) ("openssl" ,openssl)
("perl" ,perl)
("python" ,python)
("zlib" ,zlib)))
(home-page "https://znc.in") (home-page "https://znc.in")
(synopsis "IRC network bouncer") (synopsis "IRC network bouncer")
(description "ZNC is an @dfn{IRC network bouncer} or @dfn{BNC}. It can (description "ZNC is an @dfn{IRC network bouncer} or @dfn{BNC}. It can

4
gnu/packages/mpi.scm
View File

@ -339,14 +339,14 @@ only provides @code{MPI_THREAD_FUNNELED}.")))
(define-public python-mpi4py (define-public python-mpi4py
(package (package
(name "python-mpi4py") (name "python-mpi4py")
(version "3.0.1") (version "3.0.2")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (pypi-uri "mpi4py" version)) (uri (pypi-uri "mpi4py" version))
(sha256 (sha256
(base32 (base32
"0ld8rjmsjr0dklvj2g1gr3ax32sdq0xjxyh0cspknc1i36waajb5")))) "1q28xl36difma1wq0acq111cqxjya32kn3lxp6fbidz3wg8jkmpq"))))
(build-system python-build-system) (build-system python-build-system)
(arguments (arguments
`(#:phases `(#:phases

74
gnu/packages/music.scm
View File

@ -20,6 +20,8 @@
;;; Copyright © 2018 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2018 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2018 Björn Höfling <bjoern.hoefling@bjoernhoefling.de> ;;; Copyright © 2018 Björn Höfling <bjoern.hoefling@bjoernhoefling.de>
;;; Copyright © 2019 Gabriel Hondet <gabrielhondet@gmail.com> ;;; Copyright © 2019 Gabriel Hondet <gabrielhondet@gmail.com>
;;; Copyright © 2019 Timotej Lazar <timotej.lazar@araneo.si>
;;; Copyright © 2019 Jakob L. Kreuze <zerodaysfordays@sdf.lonestar.org>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -128,6 +130,7 @@
#:use-module (gnu packages tcl) #:use-module (gnu packages tcl)
#:use-module (gnu packages texinfo) #:use-module (gnu packages texinfo)
#:use-module (gnu packages tex) #:use-module (gnu packages tex)
#:use-module (gnu packages time)
#:use-module (gnu packages tls) #:use-module (gnu packages tls)
#:use-module (gnu packages version-control) #:use-module (gnu packages version-control)
#:use-module (gnu packages video) #:use-module (gnu packages video)
@ -314,7 +317,7 @@ playing your music.")
(define-public cmus (define-public cmus
(package (package
(name "cmus") (name "cmus")
(version "2.7.1") (version "2.8.0")
(source (origin (source (origin
(method git-fetch) (method git-fetch)
(uri (git-reference (uri (git-reference
@ -323,7 +326,7 @@ playing your music.")
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"0xd96py21bl869qlv1353zw7xsgq6v5s8szr0ldr63zj5fgc2ps5")))) "1ydnvq13ay8b8mfmmgwi5qsgyf220yi1d01acbnxqn775dghmwar"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:tests? #f ; cmus does not include tests `(#:tests? #f ; cmus does not include tests
@ -1362,7 +1365,7 @@ users to select LV2 plugins and run them with jalv.")
(define-public synthv1 (define-public synthv1
(package (package
(name "synthv1") (name "synthv1")
(version "0.9.7") (version "0.9.8")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (uri
@ -1370,12 +1373,10 @@ users to select LV2 plugins and run them with jalv.")
"/synthv1-" version ".tar.gz")) "/synthv1-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"0i70wm430fvksi3g985farrkhgb7mwhi7j06dl66cdj1n12jzzk7")))) "15kabmxp38wqvavs5hr1dqasjjf1j977kzqggxfmzyi3y5fan3hj"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:tests? #f ; there are no tests `(#:tests? #f)) ; there are no tests
#:configure-flags
'("CXXFLAGS=-std=gnu++11")))
(inputs (inputs
`(("jack" ,jack-1) `(("jack" ,jack-1)
("lv2" ,lv2) ("lv2" ,lv2)
@ -1396,7 +1397,7 @@ oscillators and stereo effects.")
(define-public drumkv1 (define-public drumkv1
(package (package
(name "drumkv1") (name "drumkv1")
(version "0.9.7") (version "0.9.8")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (uri
@ -1404,12 +1405,10 @@ oscillators and stereo effects.")
"/drumkv1-" version ".tar.gz")) "/drumkv1-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"1361dqdasrc98q9hcjdwsjx6agfimwnay430887fryi3pslkyd81")))) "010p8nwnmqgj5mw324psig3hxi1g2gylxrigd6sj6sgcpy3kdm23"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:tests? #f ; there are no tests `(#:tests? #f)) ; there are no tests
#:configure-flags
'("CXXFLAGS=-std=gnu++11")))
(inputs (inputs
`(("jack" ,jack-1) `(("jack" ,jack-1)
("lv2" ,lv2) ("lv2" ,lv2)
@ -1431,7 +1430,7 @@ effects.")
(define-public samplv1 (define-public samplv1
(package (package
(name "samplv1") (name "samplv1")
(version "0.9.7") (version "0.9.8")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (uri
@ -1439,12 +1438,10 @@ effects.")
"/samplv1-" version ".tar.gz")) "/samplv1-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"1vgmcjccpgqqlmmwfg6m91nph81p2xaxydjx82n4l1yrr9lidn9h")))) "138kd9szgn3b97s7crhsyj8pgwb0bn4l9knd4zliqjgj2f1bs9x0"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:tests? #f ; there are no tests `(#:tests? #f)) ; there are no tests
#:configure-flags
'("CXXFLAGS=-std=gnu++11")))
(inputs (inputs
`(("jack" ,jack-1) `(("jack" ,jack-1)
("lv2" ,lv2) ("lv2" ,lv2)
@ -1466,7 +1463,7 @@ effects.")
(define-public padthv1 (define-public padthv1
(package (package
(name "padthv1") (name "padthv1")
(version "0.9.7") (version "0.9.8")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (uri
@ -1474,12 +1471,10 @@ effects.")
"/padthv1-" version ".tar.gz")) "/padthv1-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"1jd4bf6a1ipvg4yhb3xf3maqg68bx97ic9l57djmkirlrkh2a3wp")))) "1k4p2ir12qjcs62knvw2s6qyvb46203yx22fnwp341cjk171cxji"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:tests? #f ; there are no tests `(#:tests? #f)) ; there are no tests
#:configure-flags
'("CXXFLAGS=-std=gnu++11")))
(inputs (inputs
`(("jack" ,jack-1) `(("jack" ,jack-1)
("lv2" ,lv2) ("lv2" ,lv2)
@ -2823,6 +2818,33 @@ metadata as it goes using the MusicBrainz database. Then it provides a variety
of tools for manipulating and accessing your music.") of tools for manipulating and accessing your music.")
(license license:expat))) (license license:expat)))
(define-public beets-bandcamp
(package
(name "beets-bandcamp")
(version "0.1.3")
(source (origin
(method url-fetch)
(uri (pypi-uri "beets-bandcamp" version))
(sha256
(base32
"04awg0zdhhg5h510fc1p3qkvr2l1qm6nf85hlr9z8im8a7xlka0i"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; there are no tests
(propagated-inputs
`(("beets" ,beets)
("python-isodate" ,python-isodate)))
(inputs
`(("python-beautifulsoup4" ,python-beautifulsoup4)
("python-requests" ,python-requests)
("python-six" ,python-six)))
(home-page "https://github.com/unrblt/beets-bandcamp")
(synopsis "Bandcamp plugin for beets")
(description
"This plugin for beets automatically obtains tag data from @uref{Bandcamp,
https://bandcamp.com/}. It's also capable of getting song lyrics and album art
using the beets FetchArt plugin.")
(license license:gpl2)))
(define-public milkytracker (define-public milkytracker
(package (package
(name "milkytracker") (name "milkytracker")
@ -2871,7 +2893,7 @@ for improved Amiga ProTracker 2/3 compatibility.")
(define-public schismtracker (define-public schismtracker
(package (package
(name "schismtracker") (name "schismtracker")
(version "20181223") (version "20190614")
(source (origin (source (origin
(method git-fetch) (method git-fetch)
(uri (git-reference (uri (git-reference
@ -2880,7 +2902,7 @@ for improved Amiga ProTracker 2/3 compatibility.")
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"18k5j10zq39y2q294avdmar87x93k57wqmq8bpz562hdqki2mz1l")) "0cg0q5bkn8a06v03vmj69xyhi4xxpl729k4008q4hiakh9gy2x49"))
(modules '((guix build utils))) (modules '((guix build utils)))
(snippet (snippet
;; Remove use of __DATE__ and __TIME__ for reproducibility. ;; Remove use of __DATE__ and __TIME__ for reproducibility.
@ -3725,7 +3747,7 @@ audio samples and various soft sythesizers. It can receive input from a MIDI ke
(define-public musescore (define-public musescore
(package (package
(name "musescore") (name "musescore")
(version "3.1") (version "3.2")
(source (origin (source (origin
(method git-fetch) (method git-fetch)
(uri (git-reference (uri (git-reference
@ -3734,7 +3756,7 @@ audio samples and various soft sythesizers. It can receive input from a MIDI ke
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"07xkn8gnnqzhj9cn1li5qpm2rfm86bmxbbfd76i1jx4v999icn0j")) "0719p4hjlq7skga8q4hvnd5w33vhrd1a1aygvqm9pn4na02zazy6"))
(modules '((guix build utils))) (modules '((guix build utils)))
(snippet (snippet
;; Un-bundle OpenSSL and remove unused libraries. ;; Un-bundle OpenSSL and remove unused libraries.

12
gnu/packages/package-management.scm
View File

@ -8,7 +8,7 @@
;;; Copyright © 2018 Julien Lepiller <julien@lepiller.eu> ;;; Copyright © 2018 Julien Lepiller <julien@lepiller.eu>
;;; Copyright © 2018, 2019 Rutger Helling <rhelling@mykolab.com> ;;; Copyright © 2018, 2019 Rutger Helling <rhelling@mykolab.com>
;;; Copyright © 2018 Sou Bunnbu <iyzsong@member.fsf.org> ;;; Copyright © 2018 Sou Bunnbu <iyzsong@member.fsf.org>
;;; Copyright © 2018 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2018, 2019 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2019 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2019 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2019 Vagrant Cascadian <vagrant@reproducible-builds.org> ;;; Copyright © 2019 Vagrant Cascadian <vagrant@reproducible-builds.org>
;;; Copyright © 2019 Jonathan Brielmaier <jonathan.brielmaier@web.de> ;;; Copyright © 2019 Jonathan Brielmaier <jonathan.brielmaier@web.de>
@ -466,14 +466,14 @@ sub-directory.")
(define-public stow (define-public stow
(package (package
(name "stow") (name "stow")
(version "2.2.2") (version "2.3.0")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "mirror://gnu/stow/stow-" (uri (string-append "mirror://gnu/stow/stow-"
version ".tar.gz")) version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"1pvky9fayms4r6fhns8jd0vavszd7d979w62vfd5n88v614pdxz2")))) "0h8qr2rxsrkg6d8jxjk68r23jgn1dxdxyp4bnzzinpa8sjhfl905"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(inputs (inputs
`(("perl" ,perl))) `(("perl" ,perl)))
@ -482,6 +482,10 @@ sub-directory.")
("perl-test-output" ,perl-test-output) ("perl-test-output" ,perl-test-output)
("perl-capture-tiny" ,perl-capture-tiny) ("perl-capture-tiny" ,perl-capture-tiny)
("perl-io-stringy" ,perl-io-stringy))) ("perl-io-stringy" ,perl-io-stringy)))
(propagated-inputs
`(("perl-clone-choose" ,perl-clone-choose)
("perl-clone" ,perl-clone)
("perl-hash-merge" ,perl-hash-merge)))
(home-page "https://www.gnu.org/software/stow/") (home-page "https://www.gnu.org/software/stow/")
(synopsis "Managing installed software packages") (synopsis "Managing installed software packages")
(description (description
@ -490,7 +494,7 @@ of data and makes them appear to be merged into the same directory. It is
typically used for managing software packages installed from source, by typically used for managing software packages installed from source, by
letting you install them apart in distinct directories and then create letting you install them apart in distinct directories and then create
symlinks to the files in a common directory such as /usr/local.") symlinks to the files in a common directory such as /usr/local.")
(license license:gpl2+))) (license license:gpl3+)))
(define-public rpm (define-public rpm
(package (package

18
gnu/packages/patches/emacs-zones-called-interactively.patch
View File

@ -1,4 +1,4 @@
From fb56fbb706804215ef9af0cc575db97c373046c6 Mon Sep 17 00:00:00 2001 From 81603e53ebaae0f0b23c4c52c7dab83e808964ec Mon Sep 17 00:00:00 2001
From: Brian Leung <bkleung89@gmail.com> From: Brian Leung <bkleung89@gmail.com>
Date: Sun, 17 Mar 2019 01:32:04 +0100 Date: Sun, 17 Mar 2019 01:32:04 +0100
Subject: [PATCH] This patch silences the byte-compiler. Subject: [PATCH] This patch silences the byte-compiler.
@ -8,36 +8,36 @@ Subject: [PATCH] This patch silences the byte-compiler.
1 file changed, 3 insertions(+), 3 deletions(-) 1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/zones.el b/zones.el diff --git a/zones.el b/zones.el
index 1bf94f0..94fa9a6 100644 index ca88d48..594ea36 100644
--- a/zones.el --- a/zones.el
+++ b/zones.el +++ b/zones.el
@@ -1031,7 +1031,7 @@ You can use `C-x n x' to widen to a previous buffer restriction. @@ -1075,7 +1075,7 @@ You can use `C-x n x' to widen to a previous buffer restriction.
This is a destructive operation. The list structure of the variable This is a destructive operation. The list structure of the variable
value can be modified." value can be modified."
- (zz-narrow-advice (interactive-p))) - (zz-narrow-advice (interactive-p)))
+ (zz-narrow-advice (called-interactively-p))) + (zz-narrow-advice (called-interactively-p 'interactive)))
(defadvice narrow-to-defun (after zz-add-zone--defun activate) (defadvice narrow-to-defun (after zz-add-zone--defun activate)
"Push the defun limits to the current `zz-izones-var'. "Push the defun limits to the current `zz-izones-var'.
@@ -1039,7 +1039,7 @@ You can use `C-x n x' to widen to a previous buffer restriction. @@ -1083,7 +1083,7 @@ You can use `C-x n x' to widen to a previous buffer restriction.
This is a destructive operation. The list structure of the variable This is a destructive operation. The list structure of the variable
value can be modified." value can be modified."
- (zz-narrow-advice (interactive-p))) - (zz-narrow-advice (interactive-p)))
+ (zz-narrow-advice (called-interactively-p))) + (zz-narrow-advice (called-interactively-p 'interactive)))
;; Call `zz-add-zone' if interactive or `zz-add-zone-anyway-p'. ;; Call `zz-add-zone' if interactive or `zz-add-zone-anyway-p'.
;; ;;
@@ -1049,7 +1049,7 @@ You can use `C-x n x' to widen to a previous buffer restriction. @@ -1093,7 +1093,7 @@ You can use `C-x n x' to widen to a previous buffer restriction.
This is a destructive operation. The list structure of the variable This is a destructive operation. The list structure of the variable
value can be modified." value can be modified."
- (zz-narrow-advice (interactive-p))) - (zz-narrow-advice (interactive-p)))
+ (zz-narrow-advice (called-interactively-p))) + (zz-narrow-advice (called-interactively-p 'interactive)))
;;(@* "General Commands") ;;(@* "General Commands")
-- --
2.21.0 2.22.0

59
gnu/packages/patches/gstreamer-buffer-reset-offset.patch Normal file
View File

@ -0,0 +1,59 @@
Fix a buffer offset problem in GStreamer 1.16. Initially reported by Mark H.
Weaver in <https://lists.gnu.org/archive/html/guix-devel/2019-06/msg00140.html>.
See also <https://gitlab.freedesktop.org/gstreamer/gstreamer/issues/316>.
From 1734c9fc1a4f99b165383ae1eb02f04e0844a00c Mon Sep 17 00:00:00 2001
From: Nicolas Dufresne <nicolas.dufresne@collabora.com>
Date: Sat, 29 Jun 2019 09:22:05 -0400
Subject: [PATCH] bufferpool: Fix the buffer size reset code
The offset in gst_buffer_resize() is additive. So to move back the
offset to zero, we need to pass the opposite of the current offset. This
was raised through the related unit test failingon 32bit as on 64bit
the alignment padding was enough to hide the issue. The test was
modified to also fail on 64bit. This patch will remove spurious
assertions like:
assertion 'bufmax >= bufoffs + offset + size' failed
Fixes #316
---
gst/gstbufferpool.c | 7 +++++--
tests/check/gst/gstbufferpool.c | 2 +-
2 files changed, 6 insertions(+), 3 deletions(-)
diff --git a/gst/gstbufferpool.c b/gst/gstbufferpool.c
index e5c7a5872..619860e63 100644
--- a/gst/gstbufferpool.c
+++ b/gst/gstbufferpool.c
@@ -1222,8 +1222,11 @@ default_reset_buffer (GstBufferPool * pool, GstBuffer * buffer)
GST_BUFFER_OFFSET_END (buffer) = GST_BUFFER_OFFSET_NONE;
/* if the memory is intact reset the size to the full size */
- if (!GST_BUFFER_FLAG_IS_SET (buffer, GST_BUFFER_FLAG_TAG_MEMORY))
- gst_buffer_resize (buffer, 0, pool->priv->size);
+ if (!GST_BUFFER_FLAG_IS_SET (buffer, GST_BUFFER_FLAG_TAG_MEMORY)) {
+ gsize offset;
+ gst_buffer_get_sizes (buffer, &offset, NULL);
+ gst_buffer_resize (buffer, -offset, pool->priv->size);
+ }
/* remove all metadata without the POOLED flag */
gst_buffer_foreach_meta (buffer, remove_meta_unpooled, pool);
diff --git a/tests/check/gst/gstbufferpool.c b/tests/check/gst/gstbufferpool.c
index f0c3c8d8e..dd9b2dc03 100644
--- a/tests/check/gst/gstbufferpool.c
+++ b/tests/check/gst/gstbufferpool.c
@@ -190,7 +190,7 @@ GST_START_TEST (test_buffer_modify_discard)
gst_buffer_pool_acquire_buffer (pool, &buf, NULL);
buffer_track_destroy (buf, &dcount);
/* do resize, as we didn't modify the memory, pool should reuse this buffer */
- gst_buffer_resize (buf, 5, 2);
+ gst_buffer_resize (buf, 8, 2);
gst_buffer_unref (buf);
/* buffer should've gone back into pool */
--
2.22.0

16
gnu/packages/patches/khmer-use-libraries.patch
View File

@ -1,16 +0,0 @@
Change setup.cfg so that the bundled zlib and bzip2 are not used. This cannot
currently be achieved using "--library z,bz2" as instructed in the setup.py.
diff --git a/setup.cfg b/setup.cfg
index c054092..080992e 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -1,7 +1,7 @@
[build_ext]
define = SEQAN_HAS_BZIP2,SEQAN_HAS_ZLIB
undef = NO_UNIQUE_RC
-# libraries = z,bz2
+libraries = z,bz2
## if using system libraries
include-dirs = lib:third-party/zlib:third-party/bzip2:third-party/seqan/core/include:third-party/smhasher
# include-dirs = lib

26
gnu/packages/patches/lcalc-default-parameters-1.patch Normal file
View File

@ -0,0 +1,26 @@
Patch taken from the Sage packaging system.
diff -Naur lcalc-1.23-vanilla/include/Ldirichlet_series.h lcalc-1.23-fixed-gcc.4.9/include/Ldirichlet_series.h
--- lcalc-1.23-vanilla/include/Ldirichlet_series.h 2012-08-08 23:21:55.000000000 +0200
+++ lcalc-1.23-fixed-gcc.4.9/include/Ldirichlet_series.h 2014-04-21 14:37:59.027464849 +0200
@@ -43,7 +43,7 @@
//XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
template <class ttype>
Complex L_function <ttype>::
-dirichlet_series(Complex s, long long N=-1)
+dirichlet_series(Complex s, long long N)
{
Complex z=0.;
long long m,n;
diff -Naur lcalc-1.23-vanilla/include/L.h lcalc-1.23-fixed-gcc.4.9/include/L.h
--- lcalc-1.23-vanilla/include/L.h 2012-08-08 23:21:55.000000000 +0200
+++ lcalc-1.23-fixed-gcc.4.9/include/L.h 2014-04-21 14:32:04.003467348 +0200
@@ -491,7 +491,7 @@
//#include "Ldirichlet_series.h" //for computing Dirichlet series
Complex partial_dirichlet_series(Complex s, long long N1, long long N2);
- Complex dirichlet_series(Complex s, long long N);
+ Complex dirichlet_series(Complex s, long long N=-1LL);
//#include "Ltaylor_series.h" //for computing taylor series for Dirichlet series
//void compute_taylor_series(int N, int K, Complex s_0, Complex *series);

58
gnu/packages/patches/lcalc-default-parameters-2.patch Normal file
View File

@ -0,0 +1,58 @@
Patch taken from the Sage packaging system.
--- lcalc-1.23/include/Lgamma.h 2012-08-08 23:21:55.000000000 +0200
+++ lcalc-1.23/include/Lgamma.h 2014-05-18 21:15:27.786889718 +0200
@@ -77,7 +77,7 @@
//n=0 should just give log_GAMMA(z)... thus making log_GAMMA
//code obsolete. But leave log_GAMMA intact anyways.
template <class ttype>
-precise(ttype) log_GAMMA (ttype z,int n=0)
+precise(ttype) log_GAMMA (ttype z,int n)
{
int M;
precise(ttype) log_G,r,r2,y;
@@ -230,7 +230,7 @@
//value exp_w which holds exp(-w)
//computes G(z,w), so there's an extra w^(-z) factor.
template <class ttype>
-Complex inc_GAMMA (ttype z,ttype w, const char *method="temme", ttype exp_w = 0, bool recycle=false)
+Complex inc_GAMMA (ttype z,ttype w, const char *method, ttype exp_w, bool recycle)
{
Complex G;
@@ -334,7 +334,7 @@
template <class ttype>
-ttype cfrac_GAMMA (ttype z,ttype w, ttype exp_w=0, bool recycle=false) //computes G(z,w) via continued fraction
+ttype cfrac_GAMMA (ttype z,ttype w, ttype exp_w, bool recycle) //computes G(z,w) via continued fraction
{
ttype G;
@@ -424,7 +424,7 @@
}
template <class ttype>
-ttype asympt_GAMMA (ttype z,ttype w, ttype exp_w = 0, bool recycle=false) //computes G(z,w) via asymptotic series
+ttype asympt_GAMMA (ttype z,ttype w, ttype exp_w, bool recycle) //computes G(z,w) via asymptotic series
{
if(my_verbose>3) cout << "called asympt_GAMMA("<<z<<","<<w<<")"<< endl;
@@ -446,7 +446,7 @@
template <class ttype>
-ttype comp_inc_GAMMA (ttype z,ttype w,ttype exp_w = 0, bool recycle=false) //computes g(z,w)
+ttype comp_inc_GAMMA (ttype z,ttype w,ttype exp_w, bool recycle) //computes g(z,w)
{
ttype g;
@@ -604,7 +604,7 @@
}
template <class ttype>
-Complex gamma_sum(Complex s, int what_type, ttype *coeff, int N, Double g, Complex l, Double Q, Long Period, Complex delta=1, const char *method="temme")
+Complex gamma_sum(Complex s, int what_type, ttype *coeff, int N, Double g, Complex l, Double Q, Long Period, Complex delta, const char *method)
{
Complex SUM=0;

13
gnu/packages/patches/lcalc-lcommon-h.patch Normal file
View File

@ -0,0 +1,13 @@
Patch taken from the Sage packaging system.
--- src/include/Lcommon.h 2010-01-31 15:16:45.000000000 +0000
+++ src/include/Lcommon.h 2011-03-08 21:19:11.849443238 +0000
@@ -25,7 +25,7 @@
#ifdef USE_MPFR
inline double lcalc_to_double(const double& x) { return x; }
#endif
-//inline double lcalc_to_double(const long double& x) { return x; }
+inline double lcalc_to_double(const long double& x) { return x; }
inline double lcalc_to_double(const int& x) { return x; }
inline double lcalc_to_double(const long long& x) { return x; }
inline double lcalc_to_double(const short& x) { return x; }

43
gnu/packages/patches/lcalc-using-namespace-std.patch Normal file
View File

@ -0,0 +1,43 @@
Patch taken from the Sage packaging system.
diff --git a/include/Lcommon.h b/include/Lcommon.h
index 1b3be43..bf40532 100644
--- a/include/Lcommon.h
+++ b/include/Lcommon.h
@@ -48,7 +48,7 @@ const bool outputSeries=true; // Whether to output the coefficients or just th
// Loop i from m to n
// Useful in tidying up most for loops
-#define loop(i,m,n) for(typeof(m) i=(m); i!=(n); i++)
+#define loop(i,m,n) for(auto i=(m); i!=(n); i++)
// A class for calculations involving polynomials of small degree
// Not efficient enough for huge polynomials
diff --git a/include/Lcommon_ld.h b/include/Lcommon_ld.h
index 86ae4df..33c560c 100644
--- a/include/Lcommon_ld.h
+++ b/include/Lcommon_ld.h
@@ -53,7 +53,7 @@ const bool outputSeries=true; // Whether to output the coefficients or just th
// Loop i from m to n
// Useful in tidying up most for loops
-#define loop(i,m,n) for(typeof(m) i=(m); i!=(n); i++)
+#define loop(i,m,n) for(auto i=(m); i!=(n); i++)
// A class for calculations involving polynomials of small degree
// Not efficient enough for huge polynomials
diff --git a/include/Lglobals.h b/include/Lglobals.h
index 60002e4..ca2606c 100644
--- a/include/Lglobals.h
+++ b/include/Lglobals.h
@@ -24,9 +24,9 @@
#ifndef Lglobals_H
#define Lglobals_H
+#include <valarray>
using namespace std;
-#include <valarray>
#ifdef USE_MPFR
#include "Lgmpfrxx.h"
typedef mpfr_class Double;

40
gnu/packages/patches/leela-zero-gtest.patch Normal file
View File

@ -0,0 +1,40 @@
Use shared gtest instead of submodule
diff --git a/CMakeLists.txt b/CMakeLists.txt
index 617e4b2..2857875 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -18,7 +18,6 @@ set(CMAKE_MODULE_PATH ${CMAKE_MODULE_PATH} "${CMAKE_SOURCE_DIR}/cmake/Modules/")
include(GNUInstallDirs)
project(leelaz)
-add_subdirectory(gtest EXCLUDE_FROM_ALL) # We don't want to install gtest, exclude it from `all`
# Required Packages
set(Boost_MIN_VERSION "1.58.0")
@@ -27,6 +26,7 @@ find_package(Boost 1.58.0 REQUIRED program_options filesystem)
find_package(Threads REQUIRED)
find_package(ZLIB REQUIRED)
find_package(OpenCL REQUIRED)
+find_package(GTest REQUIRED)
# We need OpenBLAS for now, because we make some specific
# calls. Ideally we'd use OpenBLAS is possible and fall back to
# not doing those calls if it's not present.
@@ -93,6 +93,7 @@ include_directories(${IncludePath})
include_directories(${Boost_INCLUDE_DIRS})
include_directories(${OpenCL_INCLUDE_DIRS})
include_directories(${ZLIB_INCLUDE_DIRS})
+include_directories(${GTEST_INCLUDE_DIRS})
if((UNIX AND NOT APPLE) OR WIN32)
include_directories(${BLAS_INCLUDE_DIRS})
@@ -141,7 +142,8 @@ target_link_libraries(tests ${Boost_LIBRARIES})
target_link_libraries(tests ${BLAS_LIBRARIES})
target_link_libraries(tests ${OpenCL_LIBRARIES})
target_link_libraries(tests ${ZLIB_LIBRARIES})
-target_link_libraries(tests gtest_main ${CMAKE_THREAD_LIBS_INIT})
+target_link_libraries(tests ${GTEST_BOTH_LIBRARIES})
+target_link_libraries(tests ${CMAKE_THREAD_LIBS_INIT})
include(GetGitRevisionDescription)
git_describe(VERSION --tags)

92
gnu/packages/patches/lrcalc-includes.patch Normal file
View File

@ -0,0 +1,92 @@
Patch taken from the Sage packaging system.
From 4a5e1c8c3c11efdb1cbb4239825a6bf4bf1c52f8 Mon Sep 17 00:00:00 2001
From: Anders Skovsted Buch <asbuch@math.rutgers.edu>
Date: Sun, 29 Nov 2015 16:25:56 -0500
Subject: [PATCH] Patch by Jeroen Demeyer to change include <vector.h> to
"vector.h", plus similar cases.
---
src/lrcalc.c | 2 +-
src/maple.c | 4 ++--
src/schublib.h | 2 +-
src/symfcn.c | 6 +++---
src/symfcn.h | 4 ++--
5 files changed, 9 insertions(+), 9 deletions(-)
diff --git a/src/lrcalc.c b/src/lrcalc.c
index aff3f75..60df49e 100644
--- a/src/lrcalc.c
+++ b/src/lrcalc.c
@@ -8,7 +8,7 @@
#include <stdlib.h>
extern char *optarg;
-#include <vectarg.h>
+#include "vectarg.h"
#include "symfcn.h"
#include "maple.h"
diff --git a/src/maple.c b/src/maple.c
index fdc0768..a5f4d14 100644
--- a/src/maple.c
+++ b/src/maple.c
@@ -4,8 +4,8 @@
*/
#include <stdio.h>
-#include <vector.h>
-#include <hashtab.h>
+#include "vector.h"
+#include "hashtab.h"
#include "maple.h"
diff --git a/src/schublib.h b/src/schublib.h
index a8e8511..864850c 100644
--- a/src/schublib.h
+++ b/src/schublib.h
@@ -1,7 +1,7 @@
#ifndef _SCHUBLIB_H
#define _SCHUBLIB_H
-#include <hashtab.h>
+#include "hashtab.h"
hashtab *trans(vector *w, int vars, hashtab *res);
hashtab *monk(int i, hashtab *slc, int rank);
diff --git a/src/symfcn.c b/src/symfcn.c
index 4ffbe4b..fd5df5d 100644
--- a/src/symfcn.c
+++ b/src/symfcn.c
@@ -5,9 +5,9 @@
#include <stdio.h>
-#include <alloc.h>
-#include <vector.h>
-#include <hashtab.h>
+#include "alloc.h"
+#include "vector.h"
+#include "hashtab.h"
#include "symfcn.h"
diff --git a/src/symfcn.h b/src/symfcn.h
index b8543b1..29bb00d 100644
--- a/src/symfcn.h
+++ b/src/symfcn.h
@@ -1,8 +1,8 @@
#ifndef _SYMFCN_H
#define _SYMFCN_H
-#include <hashtab.h>
-#include <vector.h>
+#include "hashtab.h"
+#include "vector.h"
int part_itr_sz(vector *part);
int part_itr_sub(vector *part, vector *outer);
--
2.1.1.1.g1fb337f

82
gnu/packages/patches/python-pyatspi-python-37.patch Normal file
View File

@ -0,0 +1,82 @@
From 29a7b929f7f1160b643dc5f5911533887173fcff Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Miro=20Hron=C4=8Dok?= <miro@hroncok.cz>
Date: Thu, 28 Jun 2018 17:10:33 +0200
Subject: [PATCH] Rename async to asynchronous, keep backwards comaptibility
async is a keyword in Python 3.7 and keeping it results in SyntaxError.
Fixes https://gitlab.gnome.org/GNOME/pyatspi2/issues/1
---
pyatspi/registry.py | 35 +++++++++++++++++++++++++++--------
1 file changed, 27 insertions(+), 8 deletions(-)
diff --git a/pyatspi/registry.py b/pyatspi/registry.py
index cb28395..f73ee16 100644
--- a/pyatspi/registry.py
+++ b/pyatspi/registry.py
@@ -50,9 +50,9 @@ class Registry(object):
reference to the Accessibility.Registry singleton. Doing so is harmless and
has no point.
- @@ivar async: Should event dispatch to local listeners be decoupled from event
- receiving from the registry?
- @@type async: boolean
+ @@ivar asynchronous: Should event dispatch to local listeners be decoupled
+ from event receiving from the registry?
+ @@type asynchronous: boolean
@@ivar reg: Reference to the real, wrapped registry object
@@type reg: Accessibility.Registry
@@ivar dev: Reference to the device controller
@@ -111,25 +111,44 @@ class Registry(object):
self.has_implementations = True
- self.async = False # not fully supported yet
+ self.asynchronous = False # not fully supported yet
self.started = False
self.event_listeners = dict()
+ def __getattr__(self, name):
+ """
+ For backwards compatibility with old API
+ """
+ if name == 'async':
+ return self.asynchronous
+ return object.__getattr__(self, name)
+
+ def __setattr__(self, name, value):
+ """
+ For backwards compatibility with old API
+ """
+ if name == 'async':
+ self.asynchronous = value
+ object.__setattr__(self, name, value)
+
def _set_default_registry (self):
self._set_registry (MAIN_LOOP_GLIB)
- def start(self, async=False, gil=True):
+ def start(self, asynchronous=False, gil=True, **kwargs):
"""
Enter the main loop to start receiving and dispatching events.
- @@param async: Should event dispatch be asynchronous (decoupled) from
- event receiving from the AT-SPI registry?
- @@type async: boolean
+ @@param asynchronous: Should event dispatch be asynchronous
+ (decoupled) from event receiving from the AT-SPI registry?
+ @@type asynchronous: boolean
@@param gil: Add an idle callback which releases the Python GIL for a few
milliseconds to allow other threads to run? Necessary if other threads
will be used in this process.
@@type gil: boolean
"""
+ if 'async' in kwargs:
+ # support previous API
+ asynchronous = kwargs['async']
if not self.has_implementations:
self._set_default_registry ()
self.started = True
--
2.22.0

4
gnu/packages/pdf.scm
View File

@ -1039,7 +1039,7 @@ multiple files.")
(define-public pdfpc (define-public pdfpc
(package (package
(name "pdfpc") (name "pdfpc")
(version "4.3.2") (version "4.3.4")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
@ -1048,7 +1048,7 @@ multiple files.")
(commit (string-append "v" version)))) (commit (string-append "v" version))))
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 "15y6g92fp6x6dwwhrhkfny5z20w7pq9c8w19fh2vzff9aa6m2h9z")))) (base32 "07aafsm4jzdgpahz83p0ajv40hry7gviyadqi13ahr8xdhhwy2sd"))))
(build-system cmake-build-system) (build-system cmake-build-system)
(arguments '(#:tests? #f)) ; no test target (arguments '(#:tests? #f)) ; no test target
(inputs (inputs

88
gnu/packages/perl.scm
View File

@ -2,7 +2,7 @@
;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2013 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2013 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2015, 2016, 2017, 2019 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2015, 2016, 2017, 2019 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015, 2016, 2017 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2015, 2016, 2017, 2019 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr> ;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr>
;;; Copyright © 2016, 2018 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2016, 2018 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2016 Jochem Raat <jchmrt@riseup.net> ;;; Copyright © 2016 Jochem Raat <jchmrt@riseup.net>
@ -383,24 +383,7 @@ error when it would have happened.")
(license (package-license perl)))) (license (package-license perl))))
(define-public perl-base (define-public perl-base
(package (deprecated-package "perl-base" perl))
(name "perl-base")
(version "2.23")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/R/RJ/RJBS/"
"base-" version ".tar.gz"))
(sha256
(base32 "1pjxcbbcpwlgzm0fzsbqd58zn8cj9vwril1wn3xfd7ws550mixa0"))))
(build-system perl-build-system)
(home-page "https://metacpan.org/release/base")
(synopsis "Establish an ISA relationship with base classes at compile time")
(description "Allows you to both load one or more modules, while setting
up inheritance from those modules at the same time. Unless you are using the
fields pragma, consider this module discouraged in favor of the lighter-weight
parent.")
(license (package-license perl)))) ;See README
(define-public perl-browser-open (define-public perl-browser-open
(package (package
@ -873,8 +856,6 @@ the Carp.pm module doesn't help.")
(build-system perl-build-system) (build-system perl-build-system)
(native-inputs (native-inputs
`(("perl-sub-name" ,perl-sub-name))) `(("perl-sub-name" ,perl-sub-name)))
(propagated-inputs
`(("perl-base" ,perl-base)))
(home-page "https://metacpan.org/release/Class-Accessor") (home-page "https://metacpan.org/release/Class-Accessor")
(synopsis "Automated accessor generation") (synopsis "Automated accessor generation")
(description "This module automagically generates accessors/mutators for (description "This module automagically generates accessors/mutators for
@ -1302,6 +1283,32 @@ objects.")
(home-page "https://metacpan.org/release/Clone") (home-page "https://metacpan.org/release/Clone")
(license (package-license perl)))) (license (package-license perl))))
(define-public perl-clone-choose
(package
(name "perl-clone-choose")
(version "0.010")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/H/HE/HERMES/"
"Clone-Choose-" version ".tar.gz"))
(sha256
(base32
"0cin2bjn5z8xhm9v4j7pwlkx88jnvz8al0njdjwyvs6fb0glh8sn"))))
(build-system perl-build-system)
(native-inputs
`(("perl-clone" ,perl-clone)
("perl-clone-pp" ,perl-clone-pp)
("perl-test-without-module" ,perl-test-without-module)))
(propagated-inputs
`(("perl-module-runtime" ,perl-module-runtime)))
(home-page "https://metacpan.org/release/Clone-Choose")
(synopsis "Choose appropriate Perl @code{clone} utility")
(description "This @code{Clone::Choose} module checks several different
modules which provide a @code{clone()} function and selects an appropriate
one.")
(license perl-license)))
(define-public perl-clone-pp (define-public perl-clone-pp
(package (package
(name "perl-clone-pp") (name "perl-clone-pp")
@ -1605,14 +1612,14 @@ CPAN::Meta object are present.")
(define-public perl-cpanel-json-xs (define-public perl-cpanel-json-xs
(package (package
(name "perl-cpanel-json-xs") (name "perl-cpanel-json-xs")
(version "4.10") (version "4.12")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (string-append "mirror://cpan/authors/id/R/RU/RURBAN/" (uri (string-append "mirror://cpan/authors/id/R/RU/RURBAN/"
"Cpanel-JSON-XS-" version ".tar.gz")) "Cpanel-JSON-XS-" version ".tar.gz"))
(sha256 (sha256
(base32 "1r92b03hkmqr0brp00cj67b1iklfd4yas481d6a5nx2941c03h3p")))) (base32 "0n66da8s88srr591i7gm1d611z9jbcz488fhqxy604diiw8pnha9"))))
(build-system perl-build-system) (build-system perl-build-system)
(propagated-inputs (propagated-inputs
`(("perl-common-sense" ,perl-common-sense))) `(("perl-common-sense" ,perl-common-sense)))
@ -3764,14 +3771,14 @@ allows you to locate these files after installation.")
(define-public perl-file-slurp (define-public perl-file-slurp
(package (package
(name "perl-file-slurp") (name "perl-file-slurp")
(version "9999.26") (version "9999.27")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (string-append "mirror://cpan/authors/id/C/CA/CAPOEIRAB/" (uri (string-append "mirror://cpan/authors/id/C/CA/CAPOEIRAB/"
"File-Slurp-" version ".tar.gz")) "File-Slurp-" version ".tar.gz"))
(sha256 (sha256
(base32 "0c09ivl50sg9j75si6cahfp1wgvhqawakb6h5j6hlca6vwjqs9qy")))) (base32 "1x233kj1qifvii7j8d4wzarwhj5z11vnpxsqvdm98dsccr7qi79s"))))
(build-system perl-build-system) (build-system perl-build-system)
(home-page "https://metacpan.org/release/File-Slurp") (home-page "https://metacpan.org/release/File-Slurp")
(synopsis "Reading/Writing/Modifying of complete files") (synopsis "Reading/Writing/Modifying of complete files")
@ -3835,8 +3842,6 @@ slurping and spewing. All functions are optionally exported.")
(sha256 (sha256
(base32 "0pr3wrxrk93wy7dz9gsb1sgl77icrs8rh2mah6wms5cdi2ll5ch1")))) (base32 "0pr3wrxrk93wy7dz9gsb1sgl77icrs8rh2mah6wms5cdi2ll5ch1"))))
(build-system perl-build-system) (build-system perl-build-system)
(propagated-inputs
`(("perl-parent" ,perl-parent)))
(home-page "https://metacpan.org/release/File-Temp") (home-page "https://metacpan.org/release/File-Temp")
(synopsis "Return name and handle of a temporary file safely") (synopsis "Return name and handle of a temporary file safely")
(description "File::Temp can be used to create and open temporary files in (description "File::Temp can be used to create and open temporary files in
@ -4969,7 +4974,7 @@ portions of this module couldn't be compiled on this machine.")
(define-public perl-mailtools (define-public perl-mailtools
(package (package
(name "perl-mailtools") (name "perl-mailtools")
(version "2.20") (version "2.21")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
@ -4979,7 +4984,7 @@ portions of this module couldn't be compiled on this machine.")
".tar.gz")) ".tar.gz"))
(sha256 (sha256
(base32 (base32
"15iizg2x1w7ca0r8rn3wwhp7w160ljvf55prspljwd6cm7vhcmpm")))) "1js43bp2dnd8n2rv8clsv749166jnyqnc91k4wkkmw5n4rlbvnaa"))))
(build-system perl-build-system) (build-system perl-build-system)
(propagated-inputs (propagated-inputs
`(("perl-timedate" ,perl-timedate))) `(("perl-timedate" ,perl-timedate)))
@ -5634,7 +5639,6 @@ Moose and is optimised for rapid startup.")
("perl-package-stash" ,perl-package-stash) ("perl-package-stash" ,perl-package-stash)
("perl-package-stash-xs" ,perl-package-stash-xs) ("perl-package-stash-xs" ,perl-package-stash-xs)
("perl-params-util" ,perl-params-util) ("perl-params-util" ,perl-params-util)
("perl-parent" ,perl-parent)
("perl-scalar-list-utils" ,perl-scalar-list-utils) ("perl-scalar-list-utils" ,perl-scalar-list-utils)
("perl-sub-exporter" ,perl-sub-exporter) ("perl-sub-exporter" ,perl-sub-exporter)
("perl-sub-name" ,perl-sub-name) ("perl-sub-name" ,perl-sub-name)
@ -6964,22 +6968,7 @@ distributions.")
(license (package-license perl)))) (license (package-license perl))))
(define-public perl-parent (define-public perl-parent
(package (deprecated-package "perl-parent" perl))
(name "perl-parent")
(version "0.237")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://cpan/authors/id/C/CO/CORION/"
"parent-" version ".tar.gz"))
(sha256
(base32 "1bnaadzf51g6zrpq6pvvgds2cc9d4w1vck7sapkd3hb5hmjdk28h"))))
(build-system perl-build-system)
(home-page "https://metacpan.org/release/parent")
(synopsis "Establish an ISA relationship with base classes at compile time")
(description "Allows you to both load one or more modules, while setting
up inheritance from those modules at the same time.")
(license (package-license perl))))
(define-public perl-path-class (define-public perl-path-class
(package (package
@ -7951,14 +7940,14 @@ uplevel() are avoided.")
(define-public perl-super (define-public perl-super
(package (package
(name "perl-super") (name "perl-super")
(version "1.20141117") (version "1.20190531")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (string-append "mirror://cpan/authors/id/C/CH/CHROMATIC/" (uri (string-append "mirror://cpan/authors/id/C/CH/CHROMATIC/"
"SUPER-" version ".tar.gz")) "SUPER-" version ".tar.gz"))
(sha256 (sha256
(base32 "1cn05kacg0xfbm1zzksm2yx2pnrzqja4d9163cxv3sdfc1yhwqhs")))) (base32 "16nk2za9fwyg7mcifacr69qi075iz1yvy8r9jh3903kzdvkiwpb8"))))
(build-system perl-build-system) (build-system perl-build-system)
(native-inputs (native-inputs
`(("perl-module-build" ,perl-module-build))) `(("perl-module-build" ,perl-module-build)))
@ -9009,8 +8998,7 @@ simple n-ary tree.")
`(("perl-module-build" ,perl-module-build) `(("perl-module-build" ,perl-module-build)
("perl-test-exception" ,perl-test-exception))) ("perl-test-exception" ,perl-test-exception)))
(propagated-inputs (propagated-inputs
`(("perl-tree-simple" ,perl-tree-simple) `(("perl-tree-simple" ,perl-tree-simple)))
("perl-base" ,perl-base)))
(home-page "https://metacpan.org/release/Tree-Simple-VisitorFactory") (home-page "https://metacpan.org/release/Tree-Simple-VisitorFactory")
(synopsis "Factory object for dispensing Visitor objects") (synopsis "Factory object for dispensing Visitor objects")
(description "This module is a factory for dispensing (description "This module is a factory for dispensing

135
gnu/packages/python-check.scm
View File

@ -105,3 +105,138 @@ is delete your existing cassette files, and run your tests again. VCR.py will
detect the absence of a cassette file and once again record all HTTP detect the absence of a cassette file and once again record all HTTP
interactions, which will update them to correspond to the new API.") interactions, which will update them to correspond to the new API.")
(license license:expat))) (license license:expat)))
(define-public python-pytest-checkdocs
(package
(name "python-pytest-checkdocs")
(version "1.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pytest-checkdocs" version))
(sha256
(base32
"07c27cdjcw6jph5kbgpxchrvwlps4ggwb2j6m7y64imnik0asrq8"))))
(build-system python-build-system)
(propagated-inputs
`(("python-importlib-metadata" ,python-importlib-metadata)))
(native-inputs
`(("python-setuptools-scm" ,python-setuptools-scm)))
(home-page "https://github.com/jaraco/pytest-checkdocs")
(synopsis "Check the README when running tests")
(description
"This package provides a pytest plugin that checks the long description
of the project to ensure it renders properly.")
(license license:expat)))
(define-public python-pytest-flake8
(package
(name "python-pytest-flake8")
(version "1.0.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pytest-flake8" version))
(sha256
(base32
"1h30gd21fjsafqxwclf25sdh89vrdz7rsh4lzw11aiw7ww9mq8jd"))))
(build-system python-build-system)
(propagated-inputs
`(("python-flake8" ,python-flake8)))
(native-inputs
`(("python-pytest" ,python-pytest)))
(home-page "https://github.com/tholo/pytest-flake8")
(synopsis "Pytest plugin to check FLAKE8 requirements")
(description
"This package provides a pytest plugin for efficiently checking PEP8
compliance.")
(license license:bsd-3)))
(define-public python-pytest-shutil
(package
(name "python-pytest-shutil")
(version "1.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pytest-shutil" version))
(sha256
(base32
"0q8j0ayzmnvlraml6i977ybdq4xi096djhf30n2m1rvnvrhm45nq"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-tests
(lambda _
(mkdir "/tmp/bin")
(substitute* "tests/integration/test_cmdline_integration.py"
(("dirname = '/bin'")
"dirname = '/tmp/bin'")
(("bindir = os.path.realpath\\('/bin'\\)")
"bindir = os.path.realpath('/tmp/bin')"))
#t)))))
(propagated-inputs
`(("python-contextlib2" ,python-contextlib2)
("python-execnet" ,python-execnet)
("python-pathpy" ,python-pathpy)
("python-termcolor" ,python-termcolor)))
(native-inputs
`(("python-mock" ,python-mock)
("python-pytest" ,python-pytest)
("python-setuptools-git" ,python-setuptools-git)))
(home-page "https://github.com/manahl/pytest-plugins")
(synopsis "Assorted shell and environment tools for py.test")
(description
"This package provides assorted shell and environment tools for the
py.test testing framework.")
(license license:expat)))
(define-public python-pytest-fixture-config
(package
(name "python-pytest-fixture-config")
(version "1.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pytest-fixture-config" version))
(sha256
(base32
"13i1qpz22w3x4dmw8vih5jdnbqfqvl7jiqs0dg764s0zf8bp98a1"))))
(build-system python-build-system)
(native-inputs
`(("python-pytest" ,python-pytest)
("python-setuptools-git" ,python-setuptools-git)))
(home-page "https://github.com/manahl/pytest-plugins")
(synopsis "Fixture configuration utils for py.test")
(description
"This package provides fixture configuration utilities for the py.test
testing framework.")
(license license:expat)))
(define-public python-pytest-virtualenv
(package
(name "python-pytest-virtualenv")
(version "1.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pytest-virtualenv" version))
(sha256
(base32
"03w2zz3crblj1p6i8nq17946hbn3zqp9z7cfnifw47hi4a4fww12"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; one test fails; can't find virtualenv
(propagated-inputs
`(("python-virtualenv" ,python-virtualenv)
("python-pytest-shutil" ,python-pytest-shutil)
("python-pytest-fixture-config" ,python-pytest-fixture-config)))
(native-inputs
`(("python-mock" ,python-mock)
("python-pytest" ,python-pytest)
("python-setuptools-git" ,python-setuptools-git)))
(home-page "https://github.com/manahl/pytest-plugins")
(synopsis "Virtualenv fixture for py.test")
(description "This package provides a virtualenv fixture for the py.test
framework.")
(license license:expat)))

33
gnu/packages/python-compression.scm
View File

@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU ;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2017, 2019 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017 ng0 <ng0@n0.is> ;;; Copyright © 2017 ng0 <ng0@n0.is>
;;; Copyright © 2017 Julien Lepiller <julien@lepiller.eu> ;;; Copyright © 2017 Julien Lepiller <julien@lepiller.eu>
;;; Copyright © 2018, 2019 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2018, 2019 Efraim Flashner <efraim@flashner.co.il>
@ -32,7 +32,8 @@
#:use-module (gnu packages check) #:use-module (gnu packages check)
#:use-module (gnu packages maths) #:use-module (gnu packages maths)
#:use-module (gnu packages python) #:use-module (gnu packages python)
#:use-module (gnu packages python-xyz)) #:use-module (gnu packages python-xyz)
#:use-module (gnu packages sphinx))
(define-public python-lzo (define-public python-lzo
(package (package
@ -205,3 +206,31 @@ install: libbitshuffle.so
#t)))))) #t))))))
(inputs '()) (inputs '())
(native-inputs '()))) (native-inputs '())))
(define-public python-zipp
(package
(name "python-zipp")
(version "0.5.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "zipp" version))
(sha256
(base32
"1hsv4zwy1pwnbrr63wjjkpwrmnk36ngbkkqw01bj5hcwh1z3m56a"))))
(build-system python-build-system)
(propagated-inputs
`(("python-contextlib2" ,python-contextlib2)
("python-pathlib2" ,python-pathlib2)
("python-rst.linker" ,python-rst.linker)))
(native-inputs
`(("python-setuptools-scm" ,python-setuptools-scm)
("python-sphinx" ,python-sphinx)
("python-unittest2" ,python-unittest2)))
(home-page "https://github.com/jaraco/zipp")
(synopsis
"Backport of pathlib-compatible object wrapper for zip files")
(description
"This package provides a @code{pathlib}-compatible @code{Zipfile} object
wrapper. It provides a backport of the @code{Path} object.")
(license license:expat)))

5
gnu/packages/python-crypto.scm
View File

@ -77,14 +77,13 @@ with what is used by the Bitcoin network.")
(define-public python-bcrypt (define-public python-bcrypt
(package (package
(name "python-bcrypt") (name "python-bcrypt")
(version "3.1.6") (version "3.1.7")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (pypi-uri "bcrypt" version)) (uri (pypi-uri "bcrypt" version))
(sha256 (sha256
(base32 (base32 "0hhywhxx301cxivgxrpslrangbfpccc8y83qbwn1f57cab3nj00b"))))
"1sh2xh0iragdq8dhssc1cdd02nppjq7b5kmv0qladfi2s9cnfqs4"))))
(build-system python-build-system) (build-system python-build-system)
(native-inputs (native-inputs
`(("python-pycparser" ,python-pycparser) `(("python-pycparser" ,python-pycparser)

297
gnu/packages/python-xyz.scm
View File

@ -29,7 +29,7 @@
;;; Copyright © 2016, 2017, 2018, 2019 Marius Bakke <mbakke@fastmail.com> ;;; Copyright © 2016, 2017, 2018, 2019 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2016, 2017 Stefan Reichör <stefan@xsteve.at> ;;; Copyright © 2016, 2017 Stefan Reichör <stefan@xsteve.at>
;;; Copyright © 2016 Dylan Jeffers <sapientech@sapientech@openmailbox.org> ;;; Copyright © 2016 Dylan Jeffers <sapientech@sapientech@openmailbox.org>
;;; Copyright © 2016, 2017 Alex Vong <alexvong1995@gmail.com> ;;; Copyright © 2016, 2017, 2019 Alex Vong <alexvong1995@gmail.com>
;;; Copyright © 2016, 2017, 2018 Arun Isaac <arunisaac@systemreboot.net> ;;; Copyright © 2016, 2017, 2018 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2016, 2017, 2018 Julien Lepiller <julien@lepiller.eu> ;;; Copyright © 2016, 2017, 2018 Julien Lepiller <julien@lepiller.eu>
;;; Copyright © 2016, 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2016, 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
@ -60,6 +60,7 @@
;;; Copyright © 2019 Brett Gilio <brettg@posteo.net> ;;; Copyright © 2019 Brett Gilio <brettg@posteo.net>
;;; Copyright © 2019 Sam <smbaines8@gmail.com> ;;; Copyright © 2019 Sam <smbaines8@gmail.com>
;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us> ;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us>
;;; Copyright © 2019 Guillaume Le Vaillant <glv@posteo.net>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -88,6 +89,7 @@
#:use-module (gnu packages compression) #:use-module (gnu packages compression)
#:use-module (gnu packages crypto) #:use-module (gnu packages crypto)
#:use-module (gnu packages databases) #:use-module (gnu packages databases)
#:use-module (gnu packages dbm)
#:use-module (gnu packages file) #:use-module (gnu packages file)
#:use-module (gnu packages fontutils) #:use-module (gnu packages fontutils)
#:use-module (gnu packages gcc) #:use-module (gnu packages gcc)
@ -118,6 +120,7 @@
#:use-module (gnu packages pkg-config) #:use-module (gnu packages pkg-config)
#:use-module (gnu packages python) #:use-module (gnu packages python)
#:use-module (gnu packages python-check) #:use-module (gnu packages python-check)
#:use-module (gnu packages python-compression)
#:use-module (gnu packages python-crypto) #:use-module (gnu packages python-crypto)
#:use-module (gnu packages python-web) #:use-module (gnu packages python-web)
#:use-module (gnu packages qt) #:use-module (gnu packages qt)
@ -2685,7 +2688,7 @@ ecosystem, but can naturally be used also by other projects.")
(define-public python-robotframework (define-public python-robotframework
(package (package
(name "python-robotframework") (name "python-robotframework")
(version "3.1.1") (version "3.1.2")
;; There are no tests in the PyPI archive. ;; There are no tests in the PyPI archive.
(source (source
(origin (origin
@ -2695,8 +2698,7 @@ ecosystem, but can naturally be used also by other projects.")
(commit (string-append "v" version)))) (commit (string-append "v" version))))
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32 "16gnxy0qinh8fhs0qvhff5z2xh49c3cqgm0d7bfjw120df6x7fym"))
"1aaiamc9l35m5sf7xl2qc5q9308v7sz3p1qgzcslsjxzddphyn4v"))
(patches (search-patches (patches (search-patches
"python-robotframework-honor-source-date-epoch.patch")))) "python-robotframework-honor-source-date-epoch.patch"))))
(build-system python-build-system) (build-system python-build-system)
@ -4856,17 +4858,101 @@ them as the version argument or in a SCM managed file.")
(define-public python2-setuptools-scm (define-public python2-setuptools-scm
(package-with-python2 python-setuptools-scm)) (package-with-python2 python-setuptools-scm))
(define-public python-pathlib2
(package
(name "python-pathlib2")
(version "2.3.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pathlib2" version))
(sha256
(base32
"0hpp92vqqgcd8h92msm9slv161b1q160igjwnkf2ag6cx0c96695"))))
(build-system python-build-system)
(propagated-inputs
`(("python-scandir" ,python-scandir)
("python-six" ,python-six)))
(home-page "https://pypi.python.org/pypi/pathlib2/")
(synopsis "Object-oriented filesystem paths")
(description "The goal of pathlib2 is to provide a backport of the
standard @code{pathlib} module which tracks the standard library module, so
all the newest features of the standard @code{pathlib} can be used also on
older Python versions.")
(license license:expat)))
(define-public python-importlib-metadata
(package
(name "python-importlib-metadata")
(version "0.18")
(source
(origin
(method url-fetch)
(uri (pypi-uri "importlib_metadata" version))
(sha256
(base32
"1nqj6vj2z4byi8flzf2lbldhqgicsz9mkpv4k69kjd8p8qxy4vnb"))))
(build-system python-build-system)
(propagated-inputs
`(("python-configparser" ,python-configparser)
("python-contextlib2" ,python-contextlib2)
("python-docutils" ,python-docutils)
("python-pathlib2" ,python-pathlib2)
("python-rst.linker" ,python-rst.linker)
("python-zipp" ,python-zipp)))
(native-inputs
`(("python-setuptools-scm" ,python-setuptools-scm)
("python-sphinx" ,python-sphinx)))
(home-page "https://importlib-metadata.readthedocs.io/")
(synopsis "Read metadata from Python packages")
(description
"@code{importlib_metadata} is a library which provides an API for
accessing an installed Python package's metadata, such as its entry points or
its top-level name. This functionality intends to replace most uses of
@code{pkg_resources} entry point API and metadata API. Along with
@code{importlib.resources} in Python 3.7 and newer, this can eliminate the
need to use the older and less efficient @code{pkg_resources} package.")
(license license:asl2.0)))
(define-public python-jaraco-packaging
(package
(name "python-jaraco-packaging")
(version "6.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jaraco.packaging" version))
(sha256
(base32
"0zimrnkh33b9g8ffw11mjh6kvs54cy5gcjw1h5cl1r7dc833dmkm"))))
(build-system python-build-system)
(propagated-inputs
`(("python-pytest" ,python-pytest)
("python-pytest-checkdocs" ,python-pytest-checkdocs)
("python-pytest-flake8" ,python-pytest-flake8)
("python-rst.linker" ,python-rst.linker)
("python-setuptools" ,python-setuptools)
("python-setuptools-scm" ,python-setuptools-scm)
("python-six" ,python-six)
("python-sphinx" ,python-sphinx)))
(home-page "https://github.com/jaraco/jaraco.packaging")
(synopsis "Tools to supplement packaging Python releases")
(description
"This package provides various tools to supplement packaging Python
releases.")
(license license:expat)))
(define-public python-pathpy (define-public python-pathpy
(package (package
(name "python-pathpy") (name "python-pathpy")
(version "11.0.1") (version "11.5.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (pypi-uri "path.py" version)) (uri (pypi-uri "path.py" version))
(sha256 (sha256
(base32 "07x15v8c7ry9bvycw294c9yq6ky9v2b0dalvgi6rn38ilh69vsz7")))) (base32 "1jxkf91syzxlpiwgm83fjfz1m5xh3jrvv4iyl5wjsnkk599pls5n"))))
;; (outputs '("out" "doc")) (outputs '("out" "doc"))
(build-system python-build-system) (build-system python-build-system)
(propagated-inputs (propagated-inputs
`(("python-appdirs" ,python-appdirs))) `(("python-appdirs" ,python-appdirs)))
@ -4875,26 +4961,31 @@ them as the version argument or in a SCM managed file.")
("python-sphinx" ,python-sphinx) ("python-sphinx" ,python-sphinx)
("python-rst.linker" ,python-rst.linker) ("python-rst.linker" ,python-rst.linker)
("python-pytest" ,python-pytest) ("python-pytest" ,python-pytest)
("python-pytest-runner" ,python-pytest-runner))) ("python-pytest-runner" ,python-pytest-runner)
("python-jaraco-packaging" ,python-jaraco-packaging)))
(arguments (arguments
;; FIXME: Documentation and tests require "jaraco.packaging". `(#:phases
`(#:tests? #f)) (modify-phases %standard-phases
;; #:phases (add-after 'build 'build-doc
;; (modify-phases %standard-phases (lambda _
;; (add-after 'build 'build-doc (setenv "LANG" "en_US.UTF-8")
;; (lambda _ (invoke "python" "setup.py" "build_sphinx")))
;; (setenv "LANG" "en_US.UTF-8") (add-after 'install 'install-doc
;; (zero? (system* "python" "setup.py" "build_sphinx")))) (lambda* (#:key outputs #:allow-other-keys)
;; (add-after 'install 'install-doc (let* ((data (string-append (assoc-ref outputs "doc") "/share"))
;; (lambda* (#:key outputs #:allow-other-keys) (doc (string-append data "/doc/" ,name "-" ,version))
;; (let* ((data (string-append (assoc-ref outputs "doc") "/share")) (html (string-append doc "/html")))
;; (doc (string-append data "/doc/" ,name "-" ,version)) (mkdir-p html)
;; (html (string-append doc "/html"))) (for-each (lambda (file)
;; (mkdir-p html) (copy-file file (string-append doc "/" file)))
;; (for-each (lambda (file) '("README.rst" "CHANGES.rst"))
;; (copy-file file (string-append doc "/" file))) (copy-recursively "build/sphinx/html" html)
;; '("README.rst" "CHANGES.rst")) #t)))
;; (copy-recursively "build/sphinx/html" html))))))) (replace 'check
(lambda _
;; The import time test aborts if an import takes longer than
;; 100ms. It may very well take a little longer than that.
(invoke "pytest" "-v" "-k" "not test_import_time"))))))
(home-page "https://github.com/jaraco/path.py") (home-page "https://github.com/jaraco/path.py")
(synopsis "Python module wrapper for built-in os.path") (synopsis "Python module wrapper for built-in os.path")
(description (description
@ -7930,6 +8021,27 @@ be set via config files and/or environment variables.")
@code{ArgumentParser} object.") @code{ArgumentParser} object.")
(license license:asl2.0))) (license license:asl2.0)))
(define-public python-contextlib2
(package
(name "python-contextlib2")
(version "0.5.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "contextlib2" version))
(sha256
(base32
"0j6ad6lwwyc9kv71skj098v5l7x5biyj2hs4lc5x1kcixqcr97sh"))))
(build-system python-build-system)
(home-page "http://contextlib2.readthedocs.org/")
(synopsis "Tools for decorators and context managers")
(description "This module is primarily a backport of the Python
3.2 contextlib to earlier Python versions. Like contextlib, it
provides utilities for common tasks involving decorators and context
managers. It also contains additional features that are not part of
the standard library.")
(license license:psfl)))
(define-public python2-contextlib2 (define-public python2-contextlib2
(package (package
(name "python2-contextlib2") (name "python2-contextlib2")
@ -9746,16 +9858,16 @@ format.")
(define-public python-twisted (define-public python-twisted
(package (package
(name "python-twisted") (name "python-twisted")
(version "19.2.0") (version "19.2.1")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (pypi-uri "Twisted" version ".tar.bz2")) (uri (pypi-uri "Twisted" version ".tar.bz2"))
(sha256 (sha256
(base32 (base32
"1gmb8d57s13d8znvqnxi47vqzqz141z443dbxg9wjkp8ia9f220p")))) "0liymyd4pzphizjlpwkncxjpm9akyr3lkfkm77yfg6wasv108b7s"))))
(build-system python-build-system) (build-system python-build-system)
(arguments (arguments
'(#:tests? #f)) ; FIXME: Some tests are failing. '(#:tests? #f)) ; FIXME: some tests fail
(propagated-inputs (propagated-inputs
`(("python-zope-interface" ,python-zope-interface) `(("python-zope-interface" ,python-zope-interface)
("python-pyhamcrest" ,python-pyhamcrest) ("python-pyhamcrest" ,python-pyhamcrest)
@ -10378,14 +10490,14 @@ etc.")
(define-public python-stem (define-public python-stem
(package (package
(name "python-stem") (name "python-stem")
(version "1.7.0") (version "1.7.1")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (pypi-uri "stem" version)) (uri (pypi-uri "stem" version))
(sha256 (sha256
(base32 (base32
"1awiglfiajnx2hva9aqpj3fmdvdb4qg7cwnlfyih827m68y3cq8v")))) "18lc95pmc7i089nlsb06dsxyjl5wbhxfqgdxbjcia35ndh8z7sn9"))))
(build-system python-build-system) (build-system python-build-system)
(arguments (arguments
`(#:phases `(#:phases
@ -13464,6 +13576,37 @@ belong to tagged versions.")
(define-public python2-setuptools-scm-git-archive (define-public python2-setuptools-scm-git-archive
(package-with-python2 python-setuptools-scm-git-archive)) (package-with-python2 python-setuptools-scm-git-archive))
(define-public python-setuptools-git
(package
(name "python-setuptools-git")
(version "1.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "setuptools-git" version))
(sha256
(base32
"0i84qjwp5m0l9qagdjww2frdh63r37km1c48mrvbmaqsl1ni6r7z"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
;; This is needed for tests.
(add-after 'unpack 'configure-git
(lambda _
(setenv "HOME" "/tmp")
(invoke "git" "config" "--global" "user.email" "guix")
(invoke "git" "config" "--global" "user.name" "guix")
#t)))))
(native-inputs
`(("git" ,git-minimal)))
(home-page "https://github.com/msabramo/setuptools-git")
(synopsis "Setuptools revision control system plugin for Git")
(description
"This package provides a plugin for Setuptools for revision control with
Git.")
(license license:bsd-3)))
(define-public python-pyclipper (define-public python-pyclipper
(package (package
(name "python-pyclipper") (name "python-pyclipper")
@ -14067,6 +14210,51 @@ source bytes using the UTF-8 encoding and then rewrites Python 3.6 style
@code{f} strings.") @code{f} strings.")
(license license:expat))) (license license:expat)))
(define-public python-typed-ast
(package
(name "python-typed-ast")
(version "1.3.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "typed-ast" version))
(sha256
(base32
"1m7pr6qpana3cvqwiw7mlvrgvmw27ch5mx1592572xhlki8g85ak"))))
(build-system python-build-system)
(arguments
`(#:modules ((guix build utils)
(guix build python-build-system)
(ice-9 ftw)
(srfi srfi-1)
(srfi srfi-26))
#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(let ((cwd (getcwd)))
(setenv "PYTHONPATH"
(string-append cwd "/build/"
(find (cut string-prefix? "lib" <>)
(scandir (string-append cwd "/build")))
":"
(getenv "PYTHONPATH"))))
(invoke "pytest")
#t)))))
(native-inputs `(("python-pytest" ,python-pytest)))
(home-page "https://github.com/python/typed_ast")
(synopsis "Fork of Python @code{ast} modules with type comment support")
(description "This package provides a parser similar to the standard
@code{ast} library. Unlike @code{ast}, the parsers in @code{typed_ast}
include PEP 484 type comments and are independent of the version of Python
under which they are run. The @code{typed_ast} parsers produce the standard
Python AST (plus type comments), and are both fast and correct, as they are
based on the CPython 2.7 and 3.7 parsers.")
;; See the file "LICENSE" for the details.
(license (list license:psfl
license:asl2.0
license:expat)))) ;ast27/Parser/spark.py
(define-public python-typing (define-public python-typing
(package (package
(name "python-typing") (name "python-typing")
@ -15155,14 +15343,13 @@ append on old values. Partd excels at shuffling operations.")
(define-public python-dask (define-public python-dask
(package (package
(name "python-dask") (name "python-dask")
(version "1.2.0") (version "1.2.2")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (pypi-uri "dask" version)) (uri (pypi-uri "dask" version))
(sha256 (sha256
(base32 (base32 "0b29gvf96gmp20wicly3v3mhyc93zbm3mdv935fka6x0wax7cy2y"))))
"1y0dqcp72ixwblgway0jpvfirlxfcmwrjiivdq96firj1hw127sd"))))
(build-system python-build-system) (build-system python-build-system)
;; A single test out of 5000+ fails. This test is marked as xfail when ;; A single test out of 5000+ fails. This test is marked as xfail when
;; pytest-xdist is used. ;; pytest-xdist is used.
@ -15373,14 +15560,13 @@ with the HTTP/2-based RPC framework gRPC.")
(define-public python-astunparse (define-public python-astunparse
(package (package
(name "python-astunparse") (name "python-astunparse")
(version "1.6.1") (version "1.6.2")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (pypi-uri "astunparse" version)) (uri (pypi-uri "astunparse" version))
(sha256 (sha256
(base32 (base32 "0rzbc44xcvzjhhiy7wac96mgal5mcjz1mfq8rmvgswskf4kf9cys"))))
"1jhidwyrqn17avqh9xnnm3wd7q7aahaq009cba67g86y6gxicyyj"))))
(build-system python-build-system) (build-system python-build-system)
(arguments '(#:tests? #f)) ; there are none (arguments '(#:tests? #f)) ; there are none
(propagated-inputs (propagated-inputs
@ -15610,3 +15796,40 @@ by Igor Pavlov.")
(define-public python2-pylzma (define-public python2-pylzma
(package-with-python2 python-pylzma)) (package-with-python2 python-pylzma))
(define-public python-bsddb3
(package
(name "python-bsddb3")
(version "6.2.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bsddb3" version))
(sha256
(base32
"019db2y6bfmiqbrgg9x9f6h72qjmqh05czdn2v5sy9bl0gs23mj2"))))
(build-system python-build-system)
(inputs
`(("bdb" ,bdb)))
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'configure-locations
(lambda* (#:key inputs #:allow-other-keys)
(setenv "BERKELEYDB_DIR" (assoc-ref inputs "bdb"))
(setenv "YES_I_HAVE_THE_RIGHT_TO_USE_THIS_BERKELEY_DB_VERSION" "1")
#t))
(replace 'check
(lambda _
(invoke "python3" "test3.py" "-v"))))))
(home-page "https://www.jcea.es/programacion/pybsddb.htm")
(synopsis "Python bindings for Oracle Berkeley DB")
(description
"This module provides a nearly complete wrapping of the Oracle/Sleepycat
C API for the Database Environment, Database, Cursor, Log Cursor, Sequence and
Transaction objects, and each of these is exposed as a Python type in the
bsddb3.db module. The database objects can use various access methods: btree,
hash, recno, and queue. Complete support of Berkeley DB distributed
transactions. Complete support for Berkeley DB Replication Manager.
Complete support for Berkeley DB Base Replication. Support for RPC.")
(license license:bsd-3)))

18
gnu/packages/rust.scm
View File

@ -871,14 +871,7 @@ jemalloc = \"" jemalloc "/lib/libjemalloc_pic.a" "\"
(delete-file-recursively "src/llvm-emscripten") (delete-file-recursively "src/llvm-emscripten")
(delete-file-recursively "src/tools/clang") (delete-file-recursively "src/tools/clang")
(delete-file-recursively "src/tools/lldb") (delete-file-recursively "src/tools/lldb")
#t)) #t))))
(patches (map search-patch '("rust-1.25-accept-more-detailed-gdb-lines.patch"
"rust-1.30-gdb-llvm.patch"
"rust-reproducible-builds.patch")))))
(inputs
;; Use LLVM 7.0
(alist-replace "llvm" (list llvm)
(package-inputs base-rust)))
(arguments (arguments
(substitute-keyword-arguments (package-arguments base-rust) (substitute-keyword-arguments (package-arguments base-rust)
((#:phases phases) ((#:phases phases)
@ -918,12 +911,6 @@ jemalloc = \"" jemalloc "/lib/libjemalloc_pic.a" "\"
"0sk84ff0cklybcp0jbbxcw7lk7mrm6kb6km5nzd6m64dy0igrlli"))) "0sk84ff0cklybcp0jbbxcw7lk7mrm6kb6km5nzd6m64dy0igrlli")))
(package (package
(inherit base-rust) (inherit base-rust)
(source
(origin
(inherit (package-source base-rust))
(patches (map search-patch '("rust-1.25-accept-more-detailed-gdb-lines.patch"
"rust-1.30-gdb-llvm.patch"
"rust-reproducible-builds.patch")))))
(arguments (arguments
(substitute-keyword-arguments (package-arguments base-rust) (substitute-keyword-arguments (package-arguments base-rust)
((#:phases phases) ((#:phases phases)
@ -1069,6 +1056,9 @@ jemalloc = \"" jemalloc "/lib/libjemalloc_pic.a" "\"
"0bbizy6b7002v1rdhrxrf5gijclbyizdhkglhp81ib3bf5x66kas"))) "0bbizy6b7002v1rdhrxrf5gijclbyizdhkglhp81ib3bf5x66kas")))
(package (package
(inherit base-rust) (inherit base-rust)
(inputs
(alist-replace "llvm" (list llvm-8)
(package-inputs base-rust)))
(arguments (arguments
(substitute-keyword-arguments (package-arguments base-rust) (substitute-keyword-arguments (package-arguments base-rust)
((#:phases phases) ((#:phases phases)

123
gnu/packages/sagemath.scm
View File

@ -1,5 +1,6 @@
;;; GNU Guix --- Functional package management for GNU ;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2019 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2019 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2019 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -24,6 +25,7 @@
#:use-module (guix git-download) #:use-module (guix git-download)
#:use-module (guix packages) #:use-module (guix packages)
#:use-module (guix utils) #:use-module (guix utils)
#:use-module (gnu packages)
#:use-module (gnu packages algebra) #:use-module (gnu packages algebra)
#:use-module (gnu packages autotools) #:use-module (gnu packages autotools)
#:use-module (gnu packages bdw-gc) #:use-module (gnu packages bdw-gc)
@ -308,8 +310,19 @@ on numerical types, while GiNaC depends on CLN for this purpose.")
(invoke "make" "libzn_poly.so"))) (invoke "make" "libzn_poly.so")))
(add-after 'install 'install-so (add-after 'install 'install-so
(lambda* (#:key outputs #:allow-other-keys) (lambda* (#:key outputs #:allow-other-keys)
(let ((lib (string-append (assoc-ref outputs "out") "/lib"))) (let* ((out (assoc-ref outputs "out"))
(install-file "libzn_poly.so" lib))))))) (lib (string-append out "/lib"))
(soname (string-append "libzn_poly-" ,version ".so"))
(target (string-append lib "/" soname)))
(install-file "libzn_poly.a" lib)
(install-file soname lib)
(symlink target
(string-append lib "/libzn_poly.so"))
(symlink target
(string-append lib "/libzn_poly-"
,(version-major+minor version)
".so")))
#t)))))
(synopsis "Arithmetic for polynomials over Z/NZ") (synopsis "Arithmetic for polynomials over Z/NZ")
(description "zn_poly implements the arithmetic of polynomials the (description "zn_poly implements the arithmetic of polynomials the
coefficients of which are modular integers.") coefficients of which are modular integers.")
@ -353,3 +366,109 @@ Boolean variables. As a unique approach, binary decision diagrams are
used as internal storage type for polynomial structures.") used as internal storage type for polynomial structures.")
(license license:gpl2+) (license license:gpl2+)
(home-page "https://gitlab.com/sagemath/zn_poly"))) (home-page "https://gitlab.com/sagemath/zn_poly")))
(define-public lcalc
(package
(name "lcalc")
(version "1.23")
;; The original home page of the project has disappeared, as well as
;; code hosted by the original author on Google Code. The latter has
;; been copied to gitlab.com/sagemath and purportedly contains patches
;; for a never released version 1.3, that supposedly follows 1.23.
;; We use the tarball as well as the patches hosted inside the sage
;; package system distributed with the sage tarball.
(source
(origin
(method url-fetch)
(uri (string-append "ftp://ftp.fu-berlin.de/unix/misc/sage/spkg/"
"upstream/lcalc/lcalc-1.23.tar.bz2"))
(sha256
(base32
"1c6dsdshgxhqppjxvxhp8yhpxaqvnz3d1mlh26r571gkq8z2bm43"))
(patches (search-patches "lcalc-lcommon-h.patch"
"lcalc-default-parameters-1.patch"
"lcalc-default-parameters-2.patch"
"lcalc-using-namespace-std.patch"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ;no tests
#:phases
(modify-phases %standard-phases
(delete 'configure)
(add-before 'build 'prepare-build
(lambda* (#:key outputs #:allow-other-keys)
(chdir "src")
(let ((out (assoc-ref outputs "out")))
(substitute* "Makefile"
(("^INSTALL_DIR= /usr/local")
(string-append "INSTALL_DIR=" out))
;; Sage renames the include directory, so we do it also.
(("include/Lfunction")
"include/libLfunction")
;; Add --std=c++11 to be compatible with the "auto" keyword
;; introduced by lcalc-using-namespace-std.patch.
(("^#EXTRA= -pg")
"EXTRA=--std=c++11")))
#t))
(add-before 'install 'make-output-dirs
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(bin (string-append out "/bin"))
(lib (string-append out "/lib"))
(include (string-append out "/include")))
(mkdir-p bin)
(mkdir-p lib)
(mkdir-p include))
#t)))))
;; FIXME:
;; We need to add pari-gp and probably pari related patches from the
;; sage project, as well as uncomment the line setting PARI_DEFINE in
;; the Makefile to get the full functionality of this package.
;; For the time being, we hope that sage can be compiled without.
(synopsis "C++ library for L-functions")
(description "Lcalc computes L-functions, in particular the Riemann
zeta function and its twists by quadratic characters.")
(license license:gpl2+)
(home-page "https://gitlab.com/sagemath/sage")))
(define-public ratpoints
(package
(name "ratpoints")
(version "2.1.3")
(source (origin
(method url-fetch)
(uri (string-append
"http://www.mathe2.uni-bayreuth.de/stoll/programs/"
"ratpoints-" version ".tar.gz"))
(sha256
(base32
"0zhad84sfds7izyksbqjmwpfw4rvyqk63yzdjd3ysd32zss5bgf4"))
(patches
;; Taken from
;; <https://git.sagemath.org/sage.git/plain/build/pkgs/ratpoints/patches/>
(search-patches "ratpoints-sturm_and_rp_private.patch"))))
(build-system gnu-build-system)
(arguments
`(#:test-target "test"
#:make-flags
(list (string-append "INSTALL_DIR=" (assoc-ref %outputs "out"))
"CCFLAGS=-fPIC")
#:phases
(modify-phases %standard-phases
(delete 'configure) ;no configure script
(add-before 'install 'create-install-directories
(lambda* (#:key outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out")))
(mkdir-p out)
(with-directory-excursion out
(for-each (lambda (d) (mkdir-p d))
'("bin" "include" "lib"))))
#t)))))
(inputs
`(("gmp" ,gmp)))
(home-page "http://www.mathe2.uni-bayreuth.de/stoll/programs/")
(synopsis "Find rational points on hyperelliptic curves")
(description "Ratpoints tries to find all rational points within
a given height bound on a hyperelliptic curve in a very efficient way,
by using an optimized quadratic sieve algorithm.")
(license license:gpl2+)))

34
gnu/packages/sawfish.scm
View File

@ -1,6 +1,8 @@
;;; GNU Guix --- Functional package management for GNU ;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015 Sou Bunnbu <iyzsong@gmail.com> ;;; Copyright © 2015 Sou Bunnbu <iyzsong@gmail.com>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 Benjamin Slade <slade@jnanam.net>
;;; Copyright © 2019 Arun Isaac <arunisaac@systemreboot.net>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -77,14 +79,14 @@ implementing both small and large scale systems.")
(define-public rep-gtk (define-public rep-gtk
(package (package
(name "rep-gtk") (name "rep-gtk")
(version "0.90.8.2") (version "0.90.8.3")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "http://download.tuxfamily.org/librep/" (uri (string-append "https://download.tuxfamily.org/librep/"
name "/" name "_" version ".tar.xz")) name "/" name "_" version ".tar.xz"))
(sha256 (sha256
(base32 (base32
"0qslm2isyv22hffdpw0nh7xk8jw8cj3h5y7d40c9h5r833w7j6sz")) "0hgkkywm8zczir3lqr727bn7ybgg71x9cwj1av8fykkr8pdpard9"))
(modules '((guix build utils))) (modules '((guix build utils)))
(snippet (snippet
'(begin '(begin
@ -94,14 +96,26 @@ implementing both small and large scale systems.")
"installdir=$(libdir)/rep")) "installdir=$(libdir)/rep"))
#t)))) #t))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments '(#:tests? #f)) ; no tests (arguments
`(#:tests? #f ; no tests
#:phases
(modify-phases %standard-phases
(add-before 'bootstrap 'remove-autogen
(lambda _
;; Remove autogen.sh so that the bootstrap phase can run
;; autoreconf.
(delete-file "autogen.sh")
#t)))))
(native-inputs (native-inputs
`(("pkg-config" ,pkg-config))) `(("autoconf" ,autoconf)
("automake" ,automake)
("libtool" ,libtool)
("pkg-config" ,pkg-config)))
(propagated-inputs (propagated-inputs
;; required by rep-gtk.pc. ;; required by rep-gtk.pc.
`(("gtk+" ,gtk+-2) `(("gtk+" ,gtk+-2)
("librep" ,librep))) ("librep" ,librep)))
(home-page "http://sawfish.wikia.com/wiki/Rep-GTK") (home-page "https://sawfish.fandom.com/wiki/Rep-GTK")
(synopsis "GTK+ binding for librep") (synopsis "GTK+ binding for librep")
(description (description
"Rep-GTK is a GTK+ (and GLib, GDK) binding to the librep, and one of the "Rep-GTK is a GTK+ (and GLib, GDK) binding to the librep, and one of the
@ -111,14 +125,14 @@ backend of Sawfish.")
(define-public sawfish (define-public sawfish
(package (package
(name "sawfish") (name "sawfish")
(version "1.11") (version "1.12.0")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "http://download.tuxfamily.org/sawfish/" (uri (string-append "https://download.tuxfamily.org/sawfish/"
name "_" version ".tar.xz")) name "_" version ".tar.xz"))
(sha256 (sha256
(base32 (base32
"0wp4m0p836a0rysbcdqb6z5hxlxqj3rgdbks3bs44rlssx0mcvyg")) "1z7awzgw8d15aw17kpbj460pcxq8l2rhkaxk47w7yg9qrmg0xja4"))
(modules '((guix build utils))) (modules '((guix build utils)))
(snippet (snippet
'(begin '(begin
@ -172,7 +186,7 @@ backend of Sawfish.")
("libxrandr" ,libxrandr) ("libxrandr" ,libxrandr)
("libxtst" ,libxtst) ("libxtst" ,libxtst)
("rep-gtk" ,rep-gtk))) ("rep-gtk" ,rep-gtk)))
(home-page "http://sawfish.wikia.com/wiki/Main_Page") (home-page "https://sawfish.tuxfamily.org")
(synopsis "Configurable window manager") (synopsis "Configurable window manager")
(description (description
"Sawfish is an extensible window manager using a Lisp-based scripting "Sawfish is an extensible window manager using a Lisp-based scripting

41
gnu/packages/statistics.scm
View File

@ -460,14 +460,14 @@ k-nearest neighbour, Learning Vector Quantization and Self-Organizing Maps.")
(define-public r-cluster (define-public r-cluster
(package (package
(name "r-cluster") (name "r-cluster")
(version "2.0.9") (version "2.1.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "cluster" version)) (uri (cran-uri "cluster" version))
(sha256 (sha256
(base32 (base32
"1bg5dvs4bzj0rp75jpxaklz12rvyh5w99h7zkvfgpgn86ljg1rlf")))) "055af3yz2biqbsbwm4arwr1yqnj4gicpzv2i6dbfl5pnz2z5byga"))))
(build-system r-build-system) (build-system r-build-system)
(native-inputs (native-inputs
`(("gfortran" ,gfortran))) `(("gfortran" ,gfortran)))
@ -1198,14 +1198,14 @@ agnes cluster diagrams.")
(define-public r-gdtools (define-public r-gdtools
(package (package
(name "r-gdtools") (name "r-gdtools")
(version "0.1.8") (version "0.1.9")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "gdtools" version)) (uri (cran-uri "gdtools" version))
(sha256 (sha256
(base32 (base32
"1ayy0s699ghaz34lklvcskfwman3x2n2772s5sa5x9k9xgsnxwcl")))) "0w4fihf52q5qxxk0lg36x6yvjjl8vw66y60ncdjs5fvnxqn5z2vb"))))
(build-system r-build-system) (build-system r-build-system)
(native-inputs (native-inputs
`(("pkg-config" ,pkg-config))) `(("pkg-config" ,pkg-config)))
@ -1651,13 +1651,13 @@ defined in different packages.")
(define-public r-rlang (define-public r-rlang
(package (package
(name "r-rlang") (name "r-rlang")
(version "0.3.4") (version "0.4.0")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "rlang" version)) (uri (cran-uri "rlang" version))
(sha256 (sha256
(base32 (base32
"1pks7d2xavzgaxqrnk3f79qsmv4wqv93f8991jv93pnb1mxpyijf")))) "038mmbmklw17ncgz53vrdx2506c1jj6di3y165bbx2sl2yia8j4p"))))
(build-system r-build-system) (build-system r-build-system)
(home-page "http://rlang.tidyverse.org") (home-page "http://rlang.tidyverse.org")
(synopsis "Functions for base types, core R and Tidyverse features") (synopsis "Functions for base types, core R and Tidyverse features")
@ -1730,14 +1730,14 @@ database.")
(define-public r-dbplyr (define-public r-dbplyr
(package (package
(name "r-dbplyr") (name "r-dbplyr")
(version "1.4.1") (version "1.4.2")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "dbplyr" version)) (uri (cran-uri "dbplyr" version))
(sha256 (sha256
(base32 (base32
"15fs66qq2p20gi3y2jlcsw27ach8rwkkkgr1mz2qbiyddbsjks6g")))) "1q2dflr88s5a1amzfld3087q422vf70052qn84zyd8895kdg10xp"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-assertthat" ,r-assertthat) `(("r-assertthat" ,r-assertthat)
@ -2537,13 +2537,13 @@ disk (or a connection).")
(define-public r-plotrix (define-public r-plotrix
(package (package
(name "r-plotrix") (name "r-plotrix")
(version "3.7-5") (version "3.7-6")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "plotrix" version)) (uri (cran-uri "plotrix" version))
(sha256 (sha256
(base32 (base32
"0k6ivryac1k81z2dijjds376a9jxwk8rf5g48snj67cnjffkybxj")))) "0ijfjlr7ls5hvfyzdmwab6bx0w3nvp0c8fgynj4355cj8mbzgmc3"))))
(build-system r-build-system) (build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/plotrix") (home-page "https://cran.r-project.org/web/packages/plotrix")
(synopsis "Various plotting functions") (synopsis "Various plotting functions")
@ -3004,14 +3004,14 @@ statements.")
(define-public r-segmented (define-public r-segmented
(package (package
(name "r-segmented") (name "r-segmented")
(version "0.5-4.0") (version "1.0-0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "segmented" version)) (uri (cran-uri "segmented" version))
(sha256 (sha256
(base32 (base32
"0wa0xjda2j33284jkp5hj1wdjysc5f4paj1s1lcixgawj4ckmxkz")))) "1igsfkffpa60zn6j45lhw1zgr5pz6rjknv2f3sylnx5l9fdwibgf"))))
(build-system r-build-system) (build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/segmented") (home-page "https://cran.r-project.org/web/packages/segmented")
(synopsis "Regression models with breakpoints estimation") (synopsis "Regression models with breakpoints estimation")
@ -3622,13 +3622,13 @@ vignettes.")
(define-public r-mvtnorm (define-public r-mvtnorm
(package (package
(name "r-mvtnorm") (name "r-mvtnorm")
(version "1.0-10") (version "1.0-11")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "mvtnorm" version)) (uri (cran-uri "mvtnorm" version))
(sha256 (sha256
(base32 (base32
"04md0wmqgif24g0a4hx19ifn4kk8nx10986vf2d9vascig6ikpri")))) "0lkjph661blc1nwfzg9w48a60wvj6ffh4zjwlisvracsx4nn2883"))))
(build-system r-build-system) (build-system r-build-system)
(inputs (inputs
`(("gfortran" ,gfortran))) `(("gfortran" ,gfortran)))
@ -4748,14 +4748,14 @@ models, generalized linear models and model-based clustering.")
(define-public r-mclust (define-public r-mclust
(package (package
(name "r-mclust") (name "r-mclust")
(version "5.4.3") (version "5.4.4")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "mclust" version)) (uri (cran-uri "mclust" version))
(sha256 (sha256
(base32 (base32
"18x5ych9zi3y87rxi4pf6f23sl2918dp9xxpw1pqa7p7drw817p6")))) "039ymr57bq5327gypizw0v2qb81j6bkqhjdh8yj23qa5sh51phyc"))))
(build-system r-build-system) (build-system r-build-system)
(native-inputs (native-inputs
`(("gfortran" ,gfortran))) `(("gfortran" ,gfortran)))
@ -4967,14 +4967,14 @@ of the points.")
(define-public r-fpc (define-public r-fpc
(package (package
(name "r-fpc") (name "r-fpc")
(version "2.2-2") (version "2.2-3")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "fpc" version)) (uri (cran-uri "fpc" version))
(sha256 (sha256
(base32 (base32
"1lzqxi2jzc753j4356b949isx2nccd32mw2ch665q78nxccp145n")))) "1dy3pla4jjgs46izqg2kxajlxr80sbr9896jbzb1qszrdx7af041"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-class" ,r-class) `(("r-class" ,r-class)
@ -4984,7 +4984,6 @@ of the points.")
("r-kernlab" ,r-kernlab) ("r-kernlab" ,r-kernlab)
("r-mass" ,r-mass) ("r-mass" ,r-mass)
("r-mclust" ,r-mclust) ("r-mclust" ,r-mclust)
("r-mvtnorm" ,r-mvtnorm)
("r-prabclus" ,r-prabclus) ("r-prabclus" ,r-prabclus)
("r-robustbase" ,r-robustbase))) ("r-robustbase" ,r-robustbase)))
(home-page "https://cran.r-project.org/web/packages/fpc") (home-page "https://cran.r-project.org/web/packages/fpc")
@ -5138,14 +5137,14 @@ using modular prediction and response module classes.")
(define-public r-quantreg (define-public r-quantreg
(package (package
(name "r-quantreg") (name "r-quantreg")
(version "5.40") (version "5.41")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (cran-uri "quantreg" version)) (uri (cran-uri "quantreg" version))
(sha256 (sha256
(base32 (base32
"1srni6lkgvy44ljxndz2j9ca702z2wy81f6z6mbbi6h06ni11qw6")))) "110ax3ngn6i94h7iw7ha67kfsmj94hycp7lk62nmyvkp34vpfykh"))))
(build-system r-build-system) (build-system r-build-system)
(native-inputs (native-inputs
`(("gfortran" ,gfortran))) `(("gfortran" ,gfortran)))

16
gnu/packages/sync.scm
View File

@ -252,16 +252,14 @@ over the Internet in an HTTP and CDN friendly way;
(define-public rclone (define-public rclone
(package (package
(name "rclone") (name "rclone")
(version "1.47.0") (version "1.48.0")
(source (origin (source
(method git-fetch) (origin
(uri (git-reference (method url-fetch)
(url "https://github.com/ncw/rclone.git") (uri (string-append "https://github.com/ncw/rclone/releases/download/v"
(commit (string-append "v" version)))) version "/rclone-v" version ".tar.gz"))
(file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32 "1r03rlsk0qpya1fl8xfhj5inccjywf2cqgkd8r6wfhf3w2qd1zlc"))))
"1nxwjr9jly6wh1ixr6a7zhlg4b3298v940040fsm0n3lcljd37zx"))))
;; FIXME: Rclone bundles some libraries Guix already provides. Need to ;; FIXME: Rclone bundles some libraries Guix already provides. Need to
;; un-bundle them. ;; un-bundle them.
(build-system go-build-system) (build-system go-build-system)

42
gnu/packages/tcl.scm
View File

@ -6,6 +6,7 @@
;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org> ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
;;; Copyright © 2017 Kei Kebreau <kkebreau@posteo.net> ;;; Copyright © 2017 Kei Kebreau <kkebreau@posteo.net>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 Julien Lepiller <julien@lepiller.eu>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -25,8 +26,10 @@
(define-module (gnu packages tcl) (define-module (gnu packages tcl)
#:use-module (guix packages) #:use-module (guix packages)
#:use-module (guix download) #:use-module (guix download)
#:use-module (guix git-download)
#:use-module (guix utils) #:use-module (guix utils)
#:use-module (guix build-system gnu) #:use-module (guix build-system gnu)
#:use-module (guix build-system go)
#:use-module (guix build-system perl) #:use-module (guix build-system perl)
#:use-module (gnu packages) #:use-module (gnu packages)
#:use-module (gnu packages image) #:use-module (gnu packages image)
@ -35,7 +38,7 @@
#:use-module (gnu packages pkg-config) #:use-module (gnu packages pkg-config)
#:use-module (gnu packages xml) #:use-module (gnu packages xml)
#:use-module (gnu packages xorg) #:use-module (gnu packages xorg)
#:use-module (guix licenses)) #:use-module ((guix licenses) #:prefix license:))
(define-public tcl (define-public tcl
(package (package
@ -81,7 +84,7 @@
(home-page "http://www.tcl.tk/") (home-page "http://www.tcl.tk/")
(synopsis "The Tcl scripting language") (synopsis "The Tcl scripting language")
(description "The Tcl (Tool Command Language) scripting language.") (description "The Tcl (Tool Command Language) scripting language.")
(license tcl/tk))) (license license:tcl/tk)))
(define-public expect (define-public expect
@ -130,7 +133,7 @@ telnet, ftp, passwd, fsck, rlogin, tip, etc. Expect really makes this
stuff trivial. Expect is also useful for testing these same stuff trivial. Expect is also useful for testing these same
applications. And by adding Tk, you can wrap interactive applications in applications. And by adding Tk, you can wrap interactive applications in
X11 GUIs.") X11 GUIs.")
(license public-domain))) ; as written in `license.terms' (license license:public-domain))) ; as written in `license.terms'
(define-public tk (define-public tk
(package (package
@ -229,7 +232,7 @@ interfaces (GUIs) in the Tcl language.")
;; those of the orignal Tix4.1.3 or Tk8.4.* sources. See the files ;; those of the orignal Tix4.1.3 or Tk8.4.* sources. See the files
;; pTk/license.terms, pTk/license.html_lib, and pTk/Tix.license for ;; pTk/license.terms, pTk/license.html_lib, and pTk/Tix.license for
;; details of this license." ;; details of this license."
(license perl-license))) (license license:perl-license)))
(define-public tcllib (define-public tcllib
(package (package
@ -343,7 +346,7 @@ modules for Tk, all written in high-level Tcl. Examples of provided widgets:
application may register callback scripts for certain document features, and application may register callback scripts for certain document features, and
when the parser encounters those features while parsing the document the when the parser encounters those features while parsing the document the
callback is evaluated.") callback is evaluated.")
(license (non-copyleft (license (license:non-copyleft
"file://LICENCE" "file://LICENCE"
"See LICENCE in the distribution.")))) "See LICENCE in the distribution."))))
@ -377,4 +380,31 @@ callback is evaluated.")
application development. TclX provides additional interfaces to the operating application development. TclX provides additional interfaces to the operating
system, and adds many new programming constructs, text manipulation tools, and system, and adds many new programming constructs, text manipulation tools, and
debugging tools.") debugging tools.")
(license tcl/tk))) (license license:tcl/tk)))
(define-public go-github.com-nsf-gothic
(let ((commit "97dfcc195b9de36c911a69a6ec2b5b2659c05652")
(revision "0"))
(package
(name "go-github.com-nsf-gothic")
(version (git-version "0.0.0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/nsf/gothic")
(commit commit)))
(sha256
(base32
"1lrhbml6r4sh22rrn3m9bck70pv0g0c1diprg7cil90x0jidxczr"))
(file-name (git-file-name name version))))
(build-system go-build-system)
(arguments
`(#:import-path "github.com/nsf/gothic"))
(propagated-inputs
`(("tk" ,tk)
("tcl" ,tcl)))
(home-page "https://github.com/nsf/gothic")
(synopsis "Tcl/Tk Go bindings")
(description "Gothic contains Go bindings for Tcl/Tk. The package contains
only one type and one function that can be used to create a Tk interpreter.")
(license license:expat))))

49
gnu/packages/text-editors.scm
View File

@ -7,6 +7,7 @@
;;; Copyright © 2014 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.org> ;;; Copyright © 2014 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.org>
;;; Copyright © 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2017, 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2019 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2019 Andreas Enge <andreas@enge.fr>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -36,15 +37,19 @@
#:use-module (gnu packages assembly) #:use-module (gnu packages assembly)
#:use-module (gnu packages boost) #:use-module (gnu packages boost)
#:use-module (gnu packages documentation) #:use-module (gnu packages documentation)
#:use-module (gnu packages fontutils)
#:use-module (gnu packages gcc) #:use-module (gnu packages gcc)
#:use-module (gnu packages glib) #:use-module (gnu packages glib)
#:use-module (gnu packages gtk) #:use-module (gnu packages gtk)
#:use-module (gnu packages guile)
#:use-module (gnu packages libbsd) #:use-module (gnu packages libbsd)
#:use-module (gnu packages libreoffice) #:use-module (gnu packages libreoffice)
#:use-module (gnu packages lua) #:use-module (gnu packages lua)
#:use-module (gnu packages ncurses) #:use-module (gnu packages ncurses)
#:use-module (gnu packages pcre) #:use-module (gnu packages pcre)
#:use-module (gnu packages perl)
#:use-module (gnu packages pkg-config) #:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages qt) #:use-module (gnu packages qt)
#:use-module (gnu packages regex) #:use-module (gnu packages regex)
#:use-module (gnu packages ruby) #:use-module (gnu packages ruby)
@ -388,3 +393,47 @@ projects. The EditorConfig project maintains a file format and plugins for
various text editors which allow this file format to be read and used by those various text editors which allow this file format to be read and used by those
editors.") editors.")
(license license:bsd-2))) (license license:bsd-2)))
(define-public texmacs
(package
(name "texmacs")
(version "1.99.9")
(source
(origin
(method url-fetch)
(uri (string-append "https://www.texmacs.org/Download/ftp/tmftp/"
"source/TeXmacs-" version "-src.tar.gz"))
(sha256
(base32
"0i95sf9y8qpgxd8f39cprbp3s200nm9lml0xdpyn46n838acvw19"))
(modules '((guix build utils)))
(snippet
'(begin
(delete-file-recursively "3rdparty")
#t))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
(inputs
`(("freetype" ,freetype)
("guile" ,guile-1.8)
("perl" ,perl)
("python" ,python-wrapper)
("qt" ,qt-4)))
(arguments
`(#:tests? #f ;no check target
#:phases
(modify-phases %standard-phases
(add-before 'configure 'gzip-flags
(lambda _
(substitute* "Makefile.in"
(("^GZIP = gzip -f") "GZIP = gzip -f -n")))))))
(synopsis "Editing platform with special features for scientists")
(description
"GNU TeXmacs is a text editing platform which is specialized for
scientists. It is ideal for editing structured documents with different
types of content. It has robust support for mathematical formulas and plots.
It can also act as an interface to external mathematical programs such as R
and Octave. TeXmacs is completely extensible via Guile.")
(license license:gpl3+)
(home-page "https://www.texmacs.org/tmweb/home/welcome.en.html")))

4
gnu/packages/video.scm
View File

@ -1446,7 +1446,7 @@ access to mpv's powerful playback capabilities.")
(define-public youtube-dl (define-public youtube-dl
(package (package
(name "youtube-dl") (name "youtube-dl")
(version "2019.05.20") (version "2019.06.21")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://github.com/rg3/youtube-dl/releases/" (uri (string-append "https://github.com/rg3/youtube-dl/releases/"
@ -1454,7 +1454,7 @@ access to mpv's powerful playback capabilities.")
version ".tar.gz")) version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"18xwdfvpkqrnj0kb8xj8hgwhgiqpv7x7x7zzr4x3vynb9grcv9m8")))) "03a729198zzhixbn7xixi9bprmk3qqh5dsyh3dqhji6lmlijx1w5"))))
(build-system python-build-system) (build-system python-build-system)
(arguments (arguments
;; The problem here is that the directory for the man page and completion ;; The problem here is that the directory for the man page and completion

44
gnu/packages/virtualization.scm
View File

@ -399,46 +399,48 @@ manage system or application containers.")
(define-public libvirt (define-public libvirt
(package (package
(name "libvirt") (name "libvirt")
(version "4.10.0") (version "5.4.0")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://libvirt.org/sources/libvirt-" (uri (string-append "https://libvirt.org/sources/libvirt-"
version ".tar.xz")) version ".tar.xz"))
(sha256 (sha256
(base32 (base32
"0v17zzyyb25nn9l18v5244myg7590dp6ppwgi8xysipifc0q77bz")))) "0ywf8m9yz2hxnic7fylzlmgy4m353r4vv5zsvp89zq5yh4h81yhw"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(;; FAIL: virshtest `(#:configure-flags
;; FAIL: virfirewalltest
;; FAIL: virkmodtest
;; FAIL: virnetsockettest
;; FAIL: networkxml2firewalltest
;; FAIL: nwfilterebiptablestest
;; FAIL: nwfilterxml2firewalltest
;; Time-out while running commandtest.
#:tests? #f
#:configure-flags
(list "--with-polkit" (list "--with-polkit"
(string-append "--docdir=" (assoc-ref %outputs "out") "/share/doc/"
,name "-" ,version)
"--sysconfdir=/etc" "--sysconfdir=/etc"
"--localstatedir=/var") "--localstatedir=/var")
#:phases #:phases
(modify-phases %standard-phases (modify-phases %standard-phases
(add-after 'unpack 'fix-tests (add-before 'configure 'fix-BOURNE_SHELL-definition
;; BOURNE_SHELL is hard-#defined to ‘/bin/sh’, causing test failures.
(lambda _ (lambda _
(substitute* '("tests/commandtest.c" (substitute* "config.h.in"
"gnulib/tests/test-posix_spawn1.c"
"gnulib/tests/test-posix_spawn2.c")
(("/bin/sh") (which "sh"))) (("/bin/sh") (which "sh")))
#t)) #t))
(add-before 'configure 'disable-broken-tests
(lambda _
(let ((tests (list "commandtest" ; hangs idly
"virnetsockettest" ; tries to network
"virshtest"))) ; fails
(substitute* "tests/Makefile.in"
(((format #f "(~a)\\$\\(EXEEXT\\)" (string-join tests "|")))
""))
#t)))
(replace 'install (replace 'install
;; Since the sysconfdir and localstatedir should be /etc and /var ;; Since the sysconfdir and localstatedir should be /etc and /var
;; at runtime, we must prevent writing to them at installation ;; at runtime, we must prevent writing to them at installation
;; time. ;; time.
(lambda _ (lambda* (#:key make-flags #:allow-other-keys)
(invoke "make" "install" (apply invoke "make" "install"
"sysconfdir=/tmp/etc" "sysconfdir=/tmp/etc"
"localstatedir=/tmp/var"))) "localstatedir=/tmp/var"
make-flags)))
(add-after 'install 'wrap-libvirtd (add-after 'install 'wrap-libvirtd
(lambda* (#:key inputs outputs #:allow-other-keys) (lambda* (#:key inputs outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out"))) (let ((out (assoc-ref outputs "out")))
@ -534,13 +536,13 @@ three libraries:
(define-public python-libvirt (define-public python-libvirt
(package (package
(name "python-libvirt") (name "python-libvirt")
(version "4.10.0") (version "5.3.0")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (pypi-uri "libvirt-python" version)) (uri (pypi-uri "libvirt-python" version))
(sha256 (sha256
(base32 (base32
"11fipj9naihgc9afc8bz5hi05xa1shp4qcy170sa18p3sl4zljb9")))) "1zrhkz68ka4f08wwm36y3zzwfn1r65h4nw1nm9qgg8jmrfazj4sj"))))
(build-system python-build-system) (build-system python-build-system)
(arguments (arguments
`(#:phases `(#:phases

14
gnu/packages/web.scm
View File

@ -202,14 +202,14 @@ Interface} specification.")
;; ’stable’ and recommends that “in general you deploy the NGINX mainline ;; ’stable’ and recommends that “in general you deploy the NGINX mainline
;; branch at all times” (https://www.nginx.com/blog/nginx-1-6-1-7-released/) ;; branch at all times” (https://www.nginx.com/blog/nginx-1-6-1-7-released/)
;; Consider updating the nginx-documentation package together with this one. ;; Consider updating the nginx-documentation package together with this one.
(version "1.17.0") (version "1.17.1")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://nginx.org/download/nginx-" (uri (string-append "https://nginx.org/download/nginx-"
version ".tar.gz")) version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"1aqgmrjzmklmv2iiyirk2h0hy35v1a76gczhjkxnms2krl35s6z2")))) "0gp7cy2bbn8yi1wapjzssf4bhmn4d4vphdb0k1wiaq2fa6s2a63g"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(inputs `(("openssl" ,openssl) (inputs `(("openssl" ,openssl)
("pcre" ,pcre) ("pcre" ,pcre)
@ -3112,7 +3112,7 @@ select or poll.")
(define-public perl-libwww (define-public perl-libwww
(package (package
(name "perl-libwww") (name "perl-libwww")
(version "6.37") (version "6.39")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append (uri (string-append
@ -3120,7 +3120,7 @@ select or poll.")
version ".tar.gz")) version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"04a24cx9gs070rvlwf5kanz03y7nnq9k2nmpr01plnm059iprvf6")))) "1mblfwz3g7vmyykmb0mcbmmad77rwx55fwaca9ymv9wajd3pg3cs"))))
(build-system perl-build-system) (build-system perl-build-system)
(native-inputs (native-inputs
`(("perl-test-fatal" ,perl-test-fatal) `(("perl-test-fatal" ,perl-test-fatal)
@ -3662,14 +3662,14 @@ applications.")
(define-public perl-uri (define-public perl-uri
(package (package
(name "perl-uri") (name "perl-uri")
(version "1.73") (version "1.76")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "mirror://cpan/authors/id/E/ET/ETHER/" (uri (string-append "mirror://cpan/authors/id/O/OA/OALDERS/"
"URI-" version ".tar.gz")) "URI-" version ".tar.gz"))
(sha256 (sha256
(base32 (base32
"04z4xwiryrbxxi48bwbkgq9q9pwfgqry3wp0ramcrwv3dx5ap9yc")))) "0gj1aj18k43kmzc3y1zhj5giinf8rksacf757r475xfna0fqxjdj"))))
(build-system perl-build-system) (build-system perl-build-system)
(native-inputs (native-inputs
;; For tests. ;; For tests.

6
gnu/packages/wine.scm
View File

@ -310,7 +310,7 @@ integrate Windows applications into your desktop.")
(define-public wine-staging-patchset-data (define-public wine-staging-patchset-data
(package (package
(name "wine-staging-patchset-data") (name "wine-staging-patchset-data")
(version "4.10") (version "4.11")
(source (source
(origin (origin
(method git-fetch) (method git-fetch)
@ -320,7 +320,7 @@ integrate Windows applications into your desktop.")
(file-name (git-file-name name version)) (file-name (git-file-name name version))
(sha256 (sha256
(base32 (base32
"0kl5718c4xk8d1va1jb5jaa2n0vw3l0hi6bpc7siaww1fp64hy98")))) "0h8qldqr9w1kwn48qgg5m1cs2xqkv8xxg2c66cvfka91hy886jcf"))))
(build-system trivial-build-system) (build-system trivial-build-system)
(native-inputs (native-inputs
`(("bash" ,bash) `(("bash" ,bash)
@ -366,7 +366,7 @@ integrate Windows applications into your desktop.")
(file-name (string-append name "-" version ".tar.xz")) (file-name (string-append name "-" version ".tar.xz"))
(sha256 (sha256
(base32 (base32
"041d3km85iqbshspy9av1fxjwq18xldrb18j04xl2fmpv1hq3pas")))) "1rmyfwlynzs2niz7l2lwjs2axm6in6gb43ldbzyzsflxsmk5fl9f"))))
(inputs `(("autoconf" ,autoconf) ; for autoreconf (inputs `(("autoconf" ,autoconf) ; for autoreconf
("faudio" ,faudio) ("faudio" ,faudio)
("ffmpeg" ,ffmpeg) ("ffmpeg" ,ffmpeg)

7
gnu/packages/xdisorg.scm
View File

@ -519,6 +519,7 @@ move windows, switch between desktops, etc.).")
(git-reference (git-reference
(url "https://github.com/resurrecting-open-source-projects/scrot.git") (url "https://github.com/resurrecting-open-source-projects/scrot.git")
(commit version))) (commit version)))
(file-name (git-file-name name version))
(sha256 (sha256
(base32 "1dg0pnmk09p7zlbyxv7d40vf54amrv73y976ds5p7096x6lmlndy")))) (base32 "1dg0pnmk09p7zlbyxv7d40vf54amrv73y976ds5p7096x6lmlndy"))))
(build-system gnu-build-system) (build-system gnu-build-system)
@ -1178,7 +1179,7 @@ connectivity of the X server running on a particular @code{DISPLAY}.")
(define-public rofi (define-public rofi
(package (package
(name "rofi") (name "rofi")
(version "1.5.2") (version "1.5.3")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://github.com/DaveDavenport/rofi/" (uri (string-append "https://github.com/DaveDavenport/rofi/"
@ -1186,7 +1187,7 @@ connectivity of the X server running on a particular @code{DISPLAY}.")
version "/rofi-" version ".tar.xz")) version "/rofi-" version ".tar.xz"))
(sha256 (sha256
(base32 (base32
"17faa0rj8vqidrijwx9jrq0c29003n8v3izvc66yssfljgb8kcpj")))) "0y78ya2va2lg3ww17n11y9awn8lhcp1px2d8gxaimxfqlxczs8la"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(inputs (inputs
`(("pango" ,pango) `(("pango" ,pango)
@ -1206,7 +1207,7 @@ connectivity of the X server running on a particular @code{DISPLAY}.")
("glib:bin" ,glib "bin") ("glib:bin" ,glib "bin")
("pkg-config" ,pkg-config))) ("pkg-config" ,pkg-config)))
(arguments (arguments
`(#:parallel-tests? #f ; May fail in some circumstances. `(#:parallel-tests? #f ; fails in some circumstances
#:phases #:phases
(modify-phases %standard-phases (modify-phases %standard-phases
(add-before 'configure 'adjust-tests (add-before 'configure 'adjust-tests

4
gnu/packages/xfce.scm
View File

@ -188,7 +188,7 @@ to share commonly used Xfce widgets among the Xfce applications.")
(define-public exo (define-public exo
(package (package
(name "exo") (name "exo")
(version "0.12.5") (version "0.12.6")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (string-append "https://archive.xfce.org/src/xfce/" (uri (string-append "https://archive.xfce.org/src/xfce/"
@ -196,7 +196,7 @@ to share commonly used Xfce widgets among the Xfce applications.")
"exo-" version ".tar.bz2")) "exo-" version ".tar.bz2"))
(sha256 (sha256
(base32 (base32
"1s23prcgall6r5dpn0qlrdq3zj13p95a5s0l2vflgrka8gb39x78")))) "00qh8ihrf09jvd26kilybihkgvv6rvi0l1bvlldxc99jb7ygy5ql"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(native-inputs (native-inputs
`(("pkg-config" ,pkg-config) `(("pkg-config" ,pkg-config)

13
gnu/packages/xorg.scm
View File

@ -1780,17 +1780,14 @@ features and to query screensaver info on specific windows.")
(define-public sessreg (define-public sessreg
(package (package
(name "sessreg") (name "sessreg")
(version "1.1.1") (version "1.1.2")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (string-append (uri (string-append
"mirror://xorg/individual/app/sessreg-" "mirror://xorg/individual/app/sessreg-" version ".tar.bz2"))
version
".tar.bz2"))
(sha256 (sha256
(base32 (base32 "0crczl25zynkrslmm8sjaxszhrh4i33m7h5fg4wfdb3k8aarxjyz"))))
"1qd66mg2bnppqz4xgdjzif2488zl82vx2c26ld3nb8pnyginm9vq"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(inputs (inputs
`(("xorgproto" ,xorgproto))) `(("xorgproto" ,xorgproto)))
@ -2076,14 +2073,14 @@ legacy X clients.")
(define-public xcalc (define-public xcalc
(package (package
(name "xcalc") (name "xcalc")
(version "1.0.7") (version "1.1.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (string-append "mirror://xorg/individual/app/" (uri (string-append "mirror://xorg/individual/app/"
"xcalc-" version ".tar.gz")) "xcalc-" version ".tar.gz"))
(sha256 (sha256
(base32 "1xgih1iq9498m7vk22qrdsck1rb905sn395azjn4a6pmhfai401b")))) (base32 "0c768lh0nh28ram9ldldhaf51024fngc589v4pjmf3lxmzcihr58"))))
(build-system gnu-build-system) (build-system gnu-build-system)
(arguments (arguments
`(#:phases (modify-phases %standard-phases `(#:phases (modify-phases %standard-phases

7
gnu/services/base.scm
View File

@ -1533,7 +1533,7 @@ GID."
(('gnu rest ...) #t) (('gnu rest ...) #t)
(rest #f))) (rest #f)))
(define (hydra-key-authorization keys guix) (define (substitute-key-authorization keys guix)
"Return a gexp with code to register KEYS, a list of files containing 'guix "Return a gexp with code to register KEYS, a list of files containing 'guix
archive' public keys, with GUIX." archive' public keys, with GUIX."
(define default-acl (define default-acl
@ -1570,8 +1570,7 @@ archive' public keys, with GUIX."
(define %default-authorized-guix-keys (define %default-authorized-guix-keys
;; List of authorized substitute keys. ;; List of authorized substitute keys.
(list (file-append guix "/share/guix/hydra.gnu.org.pub") (list (file-append guix "/share/guix/berlin.guixsd.org.pub")))
(file-append guix "/share/guix/berlin.guixsd.org.pub")))
(define-record-type* <guix-configuration> (define-record-type* <guix-configuration>
guix-configuration make-guix-configuration guix-configuration make-guix-configuration
@ -1688,7 +1687,7 @@ archive' public keys, with GUIX."
;; Optionally authorize substitute server keys. ;; Optionally authorize substitute server keys.
(if authorize-key? (if authorize-key?
(hydra-key-authorization keys guix) (substitute-key-authorization keys guix)
#~#f)))) #~#f))))
(define* (references-file item #:optional (name "references")) (define* (references-file item #:optional (name "references"))

14
gnu/services/networking.scm
View File

@ -895,11 +895,17 @@ and @command{wicd-curses} user interfaces."
(vpn-plugins network-manager-vpn-plugins ;list of <package> (vpn-plugins network-manager-vpn-plugins ;list of <package>
(default '()))) (default '())))
(define %network-manager-activation (define network-manager-activation
;; Activation gexp for NetworkManager. ;; Activation gexp for NetworkManager
(match-lambda
(($ <network-manager-configuration> network-manager dns vpn-plugins)
#~(begin #~(begin
(use-modules (guix build utils)) (use-modules (guix build utils))
(mkdir-p "/etc/NetworkManager/system-connections"))) (mkdir-p "/etc/NetworkManager/system-connections")
#$@(if (equal? dns "dnsmasq")
;; create directory to store dnsmasq lease file
'((mkdir-p "/var/lib/misc"))
'())))))
(define (vpn-plugin-directory plugins) (define (vpn-plugin-directory plugins)
"Return a directory containing PLUGINS, the NM VPN plugins." "Return a directory containing PLUGINS, the NM VPN plugins."
@ -949,7 +955,7 @@ and @command{wicd-curses} user interfaces."
(service-extension dbus-root-service-type config->package) (service-extension dbus-root-service-type config->package)
(service-extension polkit-service-type config->package) (service-extension polkit-service-type config->package)
(service-extension activation-service-type (service-extension activation-service-type
(const %network-manager-activation)) network-manager-activation)
(service-extension session-environment-service-type (service-extension session-environment-service-type
network-manager-environment) network-manager-environment)
;; Add network-manager to the system profile. ;; Add network-manager to the system profile.

4
gnu/system/install.scm
View File

@ -330,8 +330,8 @@ Access documentation at any time by pressing Alt-F2.\x1b[0m
;; The usual services. ;; The usual services.
(syslog-service) (syslog-service)
;; The build daemon. Register the hydra.gnu.org key as trusted. ;; The build daemon. Register the default substitute server key(s)
;; This allows the installation process to use substitutes by ;; as trusted to allow the installation process to use substitutes by
;; default. ;; default.
(service guix-service-type (service guix-service-type
(guix-configuration (authorize-key? #t))) (guix-configuration (authorize-key? #t)))

7
gnu/system/linux-initrd.scm
View File

@ -2,7 +2,7 @@
;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2016 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2016 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org> ;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
;;; Copyright © 2017 Mathieu Othacehe <m.othacehe@gmail.com> ;;; Copyright © 2017, 2019 Mathieu Othacehe <m.othacehe@gmail.com>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -273,7 +273,10 @@ FILE-SYSTEMS."
(append-map (compose file-system-type-modules file-system-type) (append-map (compose file-system-type-modules file-system-type)
file-systems)) file-systems))
(define* (default-initrd-modules #:optional (system (%current-system))) (define* (default-initrd-modules
#:optional
(system (or (%current-target-system)
(%current-system))))
"Return the list of modules included in the initrd by default." "Return the list of modules included in the initrd by default."
(define virtio-modules (define virtio-modules
;; Modules for Linux para-virtualized devices, for use in QEMU guests. ;; Modules for Linux para-virtualized devices, for use in QEMU guests.

4
gnu/tests/base.scm
View File

@ -223,8 +223,8 @@ info --version")
(operating-system-user-accounts os)))) (operating-system-user-accounts os))))
(marionette-eval (marionette-eval
`(begin `(begin
(use-modules (srfi srfi-1) (ice-9 ftw) (use-modules (guix build utils) (srfi srfi-1)
(ice-9 match)) (ice-9 ftw) (ice-9 match))
(every (match-lambda (every (match-lambda
((user home) ((user home)

1
gnu/tests/install.scm
View File

@ -79,6 +79,7 @@
(services (cons (service marionette-service-type (services (cons (service marionette-service-type
(marionette-configuration (marionette-configuration
(imported-modules '((gnu services herd) (imported-modules '((gnu services herd)
(guix build utils)
(guix combinators))))) (guix combinators)))))
%base-services)))) %base-services))))

3
guix/build/compile.scm
View File

@ -63,7 +63,8 @@
;; strings" due to the fact that we use 'G_' instead of '_'. We'll need ;; strings" due to the fact that we use 'G_' instead of '_'. We'll need
;; help from Guile to solve this. ;; help from Guile to solve this.
'(unsupported-warning unbound-variable arity-mismatch '(unsupported-warning unbound-variable arity-mismatch
macro-use-before-definition)) ;new in 2.2 macro-use-before-definition ;new in 2.2
shadowed-toplevel)) ;new in 2.2.5
(define (optimization-options file) (define (optimization-options file)
"Return the default set of optimizations options for FILE." "Return the default set of optimizations options for FILE."

6
guix/build/download-nar.scm
View File

@ -42,10 +42,10 @@
"Return the fallback nar URL for ITEM--e.g., "Return the fallback nar URL for ITEM--e.g.,
\"/gnu/store/cabbag3…-foo-1.2-checkout\"." \"/gnu/store/cabbag3…-foo-1.2-checkout\"."
;; Here we hard-code nar URLs without checking narinfos. That's probably OK ;; Here we hard-code nar URLs without checking narinfos. That's probably OK
;; though. ;; though. Use berlin.guixsd.org instead of its ci.guix.gnu.org front end to
;; avoid sending these requests to CDN providers without user consent.
;; TODO: Use HTTPS? The downside is the extra dependency. ;; TODO: Use HTTPS? The downside is the extra dependency.
(let ((bases '("http://mirror.hydra.gnu.org/guix" (let ((bases '("http://berlin.guixsd.org"))
"http://berlin.guixsd.org"))
(item (basename item))) (item (basename item)))
(append (map (cut string-append <> "/nar/gzip/" item) bases) (append (map (cut string-append <> "/nar/gzip/" item) bases)
(map (cut string-append <> "/nar/" item) bases)))) (map (cut string-append <> "/nar/" item) bases))))

37
guix/build/syscalls.scm
View File

@ -146,6 +146,7 @@
window-size-y-pixels window-size-y-pixels
terminal-window-size terminal-window-size
terminal-columns terminal-columns
terminal-rows
utmpx? utmpx?
utmpx-login-type utmpx-login-type
@ -1871,23 +1872,17 @@ corresponds to the TIOCGWINSZ ioctl."
(list (strerror err)) (list (strerror err))
(list err))))) (list err)))))
(define* (terminal-columns #:optional (port (current-output-port))) (define (terminal-dimension window-dimension port fall-back)
"Return the best approximation of the number of columns of the terminal at "Return the terminal dimension defined by WINDOW-DIMENSION, one of
PORT, trying to guess a reasonable value if all else fails. The result is 'window-size-columns' or 'window-size-rows' for PORT. If PORT does not
always a positive integer." correspond to a terminal, return the value returned by FALL-BACK."
(define (fall-back)
(match (and=> (getenv "COLUMNS") string->number)
(#f 80)
((? number? columns)
(if (> columns 0) columns 80))))
(catch 'system-error (catch 'system-error
(lambda () (lambda ()
(if (file-port? port) (if (file-port? port)
(match (window-size-columns (terminal-window-size port)) (match (window-dimension (terminal-window-size port))
;; Things like Emacs shell-mode return 0, which is unreasonable. ;; Things like Emacs shell-mode return 0, which is unreasonable.
(0 (fall-back)) (0 (fall-back))
((? number? columns) columns)) ((? number? n) n))
(fall-back))) (fall-back)))
(lambda args (lambda args
(let ((errno (system-error-errno args))) (let ((errno (system-error-errno args)))
@ -1900,6 +1895,24 @@ always a positive integer."
(fall-back) (fall-back)
(apply throw args)))))) (apply throw args))))))
(define* (terminal-columns #:optional (port (current-output-port)))
"Return the best approximation of the number of columns of the terminal at
PORT, trying to guess a reasonable value if all else fails. The result is
always a positive integer."
(define (fall-back)
(match (and=> (getenv "COLUMNS") string->number)
(#f 80)
((? number? columns)
(if (> columns 0) columns 80))))
(terminal-dimension window-size-columns port fall-back))
(define* (terminal-rows #:optional (port (current-output-port)))
"Return the best approximation of the number of rows of the terminal at
PORT, trying to guess a reasonable value if all else fails. The result is
always a positive integer."
(terminal-dimension window-size-rows port (const 25)))
;;; ;;;
;;; utmpx. ;;; utmpx.

249
guix/derivations.scm
View File

@ -21,6 +21,7 @@
#:use-module (srfi srfi-1) #:use-module (srfi srfi-1)
#:use-module (srfi srfi-9) #:use-module (srfi srfi-9)
#:use-module (srfi srfi-9 gnu) #:use-module (srfi srfi-9 gnu)
#:use-module (srfi srfi-11)
#:use-module (srfi srfi-26) #:use-module (srfi srfi-26)
#:use-module (srfi srfi-34) #:use-module (srfi srfi-34)
#:use-module (srfi srfi-35) #:use-module (srfi srfi-35)
@ -34,6 +35,7 @@
#:use-module (guix base16) #:use-module (guix base16)
#:use-module (guix memoization) #:use-module (guix memoization)
#:use-module (guix combinators) #:use-module (guix combinators)
#:use-module (guix deprecation)
#:use-module (guix monads) #:use-module (guix monads)
#:use-module (gcrypt hash) #:use-module (gcrypt hash)
#:use-module (guix base32) #:use-module (guix base32)
@ -50,7 +52,8 @@
derivation-builder-environment-vars derivation-builder-environment-vars
derivation-file-name derivation-file-name
derivation-prerequisites derivation-prerequisites
derivation-prerequisites-to-build derivation-build-plan
derivation-prerequisites-to-build ;deprecated
<derivation-output> <derivation-output>
derivation-output? derivation-output?
@ -61,6 +64,7 @@
<derivation-input> <derivation-input>
derivation-input? derivation-input?
derivation-input
derivation-input-path derivation-input-path
derivation-input-derivation derivation-input-derivation
derivation-input-sub-derivations derivation-input-sub-derivations
@ -148,14 +152,28 @@
(recursive? derivation-output-recursive?)) ; Boolean (recursive? derivation-output-recursive?)) ; Boolean
(define-immutable-record-type <derivation-input> (define-immutable-record-type <derivation-input>
(make-derivation-input path sub-derivations) (make-derivation-input drv sub-derivations)
derivation-input? derivation-input?
(path derivation-input-path) ; store path (drv derivation-input-derivation) ; <derivation>
(sub-derivations derivation-input-sub-derivations)) ; list of strings (sub-derivations derivation-input-sub-derivations)) ; list of strings
(define (derivation-input-derivation input)
"Return the <derivation> object INPUT refers to." (define (derivation-input-path input)
(read-derivation-from-file (derivation-input-path input))) "Return the file name of the derivation INPUT refers to."
(derivation-file-name (derivation-input-derivation input)))
(define* (derivation-input drv #:optional
(outputs (derivation-output-names drv)))
"Return a <derivation-input> for the OUTPUTS of DRV."
;; This is a public interface meant to be more convenient than
;; 'make-derivation-input' and giving us more control.
(make-derivation-input drv outputs))
(define (derivation-input-key input)
"Return an object for which 'equal?' and 'hash' are constant-time, and which
can thus be used as a key for INPUT in lookup tables."
(cons (derivation-input-path input)
(derivation-input-sub-derivations input)))
(set-record-type-printer! <derivation> (set-record-type-printer! <derivation>
(lambda (drv port) (lambda (drv port)
@ -197,8 +215,8 @@ download with a fixed hash (aka. `fetchurl')."
"Return the list of output paths corresponding to INPUT, a "Return the list of output paths corresponding to INPUT, a
<derivation-input>." <derivation-input>."
(match input (match input
(($ <derivation-input> path sub-drvs) (($ <derivation-input> drv sub-drvs)
(map (cut derivation-path->output-path path <>) (map (cut derivation->output-path drv <>)
sub-drvs)))) sub-drvs))))
(define (valid-derivation-input? store input) (define (valid-derivation-input? store input)
@ -213,20 +231,20 @@ they are coalesced, with their sub-derivations merged. This is needed because
Nix itself keeps only one of them." Nix itself keeps only one of them."
(fold (lambda (input result) (fold (lambda (input result)
(match input (match input
(($ <derivation-input> path sub-drvs) (($ <derivation-input> (= derivation-file-name path) sub-drvs)
;; XXX: quadratic ;; XXX: quadratic
(match (find (match-lambda (match (find (match-lambda
(($ <derivation-input> p s) (($ <derivation-input> (= derivation-file-name p)
s)
(string=? p path))) (string=? p path)))
result) result)
(#f (#f
(cons input result)) (cons input result))
((and dup ($ <derivation-input> _ sub-drvs2)) ((and dup ($ <derivation-input> drv sub-drvs2))
;; Merge DUP with INPUT. ;; Merge DUP with INPUT.
(let ((sub-drvs (delete-duplicates (let ((sub-drvs (delete-duplicates
(append sub-drvs sub-drvs2)))) (append sub-drvs sub-drvs2))))
(cons (make-derivation-input path (cons (make-derivation-input drv (sort sub-drvs string<?))
(sort sub-drvs string<?))
(delq dup result)))))))) (delq dup result))))))))
'() '()
inputs)) inputs))
@ -242,12 +260,14 @@ result is the set of prerequisites of DRV not already in valid."
(result '()) (result '())
(input-set (set))) (input-set (set)))
(let ((inputs (remove (lambda (input) (let ((inputs (remove (lambda (input)
(or (set-contains? input-set input) (or (set-contains? input-set
(derivation-input-key input))
(cut? input))) (cut? input)))
(derivation-inputs drv)))) (derivation-inputs drv))))
(fold2 loop (fold2 loop
(append inputs result) (append inputs result)
(fold set-insert input-set inputs) (fold set-insert input-set
(map derivation-input-key inputs))
(map derivation-input-derivation inputs))))) (map derivation-input-derivation inputs)))))
(define (offloadable-derivation? drv) (define (offloadable-derivation? drv)
@ -333,87 +353,81 @@ substituter many times."
(#f #f) (#f #f)
((key . value) value))))) ((key . value) value)))))
(define* (derivation-prerequisites-to-build store drv (define* (derivation-build-plan store inputs
#:key #:key
(mode (build-mode normal)) (mode (build-mode normal))
(outputs
(derivation-output-names drv))
(substitutable-info (substitutable-info
(substitution-oracle store (substitution-oracle
(list drv) store
(map derivation-input-derivation
inputs)
#:mode mode))) #:mode mode)))
"Return two values: the list of derivation-inputs required to build the "Given INPUTS, a list of derivation-inputs, return two values: the list of
OUTPUTS of DRV and not already available in STORE, recursively, and the list derivation to build, and the list of substitutable items that, together,
of required store paths that can be substituted. SUBSTITUTABLE-INFO must be a allows INPUTS to be realized.
one-argument procedure similar to that returned by 'substitution-oracle'."
(define built?
(mlambda (item)
(valid-path? store item)))
(define input-built? SUBSTITUTABLE-INFO must be a one-argument procedure similar to that returned
(compose (cut any built? <>) derivation-input-output-paths)) by 'substitution-oracle'."
(define (built? item)
(valid-path? store item))
(define input-substitutable? (define (input-built? input)
;; Return true if and only if all of SUB-DRVS are subsitutable. If at
;; least one is missing, then everything must be rebuilt.
(compose (cut every substitutable-info <>) derivation-input-output-paths))
(define (derivation-built? drv* sub-drvs)
;; In 'check' mode, assume that DRV is not built. ;; In 'check' mode, assume that DRV is not built.
(and (not (and (eqv? mode (build-mode check)) (and (not (and (eqv? mode (build-mode check))
(eq? drv* drv))) (member input inputs)))
(every built? (derivation-output-paths drv* sub-drvs)))) (every built? (derivation-input-output-paths input))))
(define (derivation-substitutable-info drv sub-drvs) (define (input-substitutable-info input)
(and (substitutable-derivation? drv) (and (substitutable-derivation? (derivation-input-derivation input))
(let ((info (filter-map substitutable-info (let* ((items (derivation-input-output-paths input))
(derivation-output-paths drv sub-drvs)))) (info (filter-map substitutable-info items)))
(and (= (length info) (length sub-drvs)) (and (= (length info) (length items))
info)))) info))))
(let loop ((drv drv) (let loop ((inputs inputs) ;list of <derivation-input>
(sub-drvs outputs) (build '()) ;list of <derivation>
(build '()) ;list of <derivation-input> (substitute '()) ;list of <substitutable>
(substitute '())) ;list of <substitutable> (visited (set))) ;set of <derivation-input>
(cond ((derivation-built? drv sub-drvs) (match inputs
(()
(values build substitute)) (values build substitute))
((derivation-substitutable-info drv sub-drvs) ((input rest ...)
(let ((key (derivation-input-key input)))
(cond ((set-contains? visited key)
(loop rest build substitute visited))
((input-built? input)
(loop rest build substitute
(set-insert key visited)))
((input-substitutable-info input)
=> =>
(lambda (substitutables) (lambda (substitutables)
(values build (loop rest build
(append substitutables substitute)))) (append substitutables substitute)
(set-insert key visited))))
(else (else
(let ((build (if (substitutable-derivation? drv) (let ((deps (derivation-inputs
build (derivation-input-derivation input))))
(cons (make-derivation-input (loop (append deps rest)
(derivation-file-name drv) sub-drvs) (cons (derivation-input-derivation input) build)
build))) substitute
(inputs (remove (lambda (i) (set-insert key visited))))))))))
(or (member i build) ; XXX: quadratic
(input-built? i)
(input-substitutable? i)))
(derivation-inputs drv))))
(fold2 loop
(append inputs build)
(append (append-map (lambda (input)
(if (and (not (input-built? input))
(input-substitutable? input))
(map substitutable-info
(derivation-input-output-paths
input))
'()))
(derivation-inputs drv))
substitute)
(map (lambda (i)
(read-derivation-from-file
(derivation-input-path i)))
inputs)
(map derivation-input-sub-derivations inputs)))))))
(define (read-derivation drv-port) (define-deprecated (derivation-prerequisites-to-build store drv #:rest rest)
derivation-build-plan
(let-values (((build download)
(apply derivation-build-plan store
(list (derivation-input drv)) rest)))
(values (map derivation-input build) download)))
(define* (read-derivation drv-port
#:optional (read-derivation-from-file
read-derivation-from-file))
"Read the derivation from DRV-PORT and return the corresponding <derivation> "Read the derivation from DRV-PORT and return the corresponding <derivation>
object. Most of the time you'll want to use 'read-derivation-from-file', object. Call READ-DERIVATION-FROM-FILE to read derivations declared as inputs
which caches things as appropriate and is thus more efficient." of the derivation being parsed.
Most of the time you'll want to use 'read-derivation-from-file', which caches
things as appropriate and is thus more efficient."
(define comma (string->symbol ",")) (define comma (string->symbol ","))
@ -449,8 +463,9 @@ which caches things as appropriate and is thus more efficient."
(fold-right (lambda (input result) (fold-right (lambda (input result)
(match input (match input
((path (sub-drvs ...)) ((path (sub-drvs ...))
(cons (make-derivation-input path sub-drvs) (let ((drv (read-derivation-from-file path)))
result)))) (cons (make-derivation-input drv sub-drvs)
result)))))
'() '()
x)) x))
@ -552,9 +567,15 @@ that form."
(define (write-input input port) (define (write-input input port)
(match input (match input
(($ <derivation-input> path sub-drvs) (($ <derivation-input> obj sub-drvs)
(display "(\"" port) (display "(\"" port)
(display path port)
;; 'derivation/masked-inputs' produces objects that contain a string
;; instead of a <derivation>, so we need to account for that.
(display (if (derivation? obj)
(derivation-file-name obj)
obj)
port)
(display "\"," port) (display "\"," port)
(write-string-list sub-drvs) (write-string-list sub-drvs)
(display ")" port)))) (display ")" port))))
@ -645,13 +666,16 @@ name of each input with that input's hash."
(($ <derivation> outputs inputs sources (($ <derivation> outputs inputs sources
system builder args env-vars) system builder args env-vars)
(let ((inputs (map (match-lambda (let ((inputs (map (match-lambda
(($ <derivation-input> path sub-drvs) (($ <derivation-input> (= derivation-file-name path)
sub-drvs)
(let ((hash (derivation-path->base16-hash path))) (let ((hash (derivation-path->base16-hash path)))
(make-derivation-input hash sub-drvs)))) (make-derivation-input hash sub-drvs))))
inputs))) inputs)))
(make-derivation outputs (make-derivation outputs
(sort (coalesce-duplicate-inputs inputs) (sort inputs
derivation-input<?) (lambda (drv1 drv2)
(string<? (derivation-input-derivation drv1)
(derivation-input-derivation drv2))))
sources sources
system builder args env-vars system builder args env-vars
#f))))) #f)))))
@ -807,17 +831,19 @@ derivation. It is kept as-is, uninterpreted, in the derivation."
(define input->derivation-input (define input->derivation-input
(match-lambda (match-lambda
(((? derivation? drv)) (((? derivation? drv))
(make-derivation-input (derivation-file-name drv) '("out"))) (make-derivation-input drv '("out")))
(((? derivation? drv) sub-drvs ...) (((? derivation? drv) sub-drvs ...)
(make-derivation-input (derivation-file-name drv) sub-drvs)) (make-derivation-input drv sub-drvs))
(((? direct-store-path? input)) (_ #f)))
(make-derivation-input input '("out")))
(((? direct-store-path? input) sub-drvs ...) (define input->source
(make-derivation-input input sub-drvs)) (match-lambda
((input . _) (((? string? input) . _)
(let ((path (add-to-store store (basename input) (if (direct-store-path? input)
input
(add-to-store store (basename input)
#t "sha256" input))) #t "sha256" input)))
(make-derivation-input path '()))))) (_ #f)))
;; Note: lists are sorted alphabetically, to conform with the behavior of ;; Note: lists are sorted alphabetically, to conform with the behavior of
;; C++ `std::map' in Nix itself. ;; C++ `std::map' in Nix itself.
@ -828,32 +854,31 @@ derivation. It is kept as-is, uninterpreted, in the derivation."
(make-derivation-output "" hash-algo (make-derivation-output "" hash-algo
hash recursive?))) hash recursive?)))
(sort outputs string<?))) (sort outputs string<?)))
(sources (sort (delete-duplicates
(filter-map input->source inputs))
string<?))
(inputs (sort (coalesce-duplicate-inputs (inputs (sort (coalesce-duplicate-inputs
(map input->derivation-input (filter-map input->derivation-input inputs))
(delete-duplicates inputs)))
derivation-input<?)) derivation-input<?))
(env-vars (sort (env-vars-with-empty-outputs (env-vars (sort (env-vars-with-empty-outputs
(user+system-env-vars)) (user+system-env-vars))
(lambda (e1 e2) (lambda (e1 e2)
(string<? (car e1) (car e2))))) (string<? (car e1) (car e2)))))
(drv-masked (make-derivation outputs (drv-masked (make-derivation outputs inputs sources
(filter (compose derivation-path?
derivation-input-path)
inputs)
(filter-map (lambda (i)
(let ((p (derivation-input-path i)))
(and (not (derivation-path? p))
p)))
inputs)
system builder args env-vars #f)) system builder args env-vars #f))
(drv (add-output-paths drv-masked))) (drv (add-output-paths drv-masked)))
(let* ((file (add-data-to-store store (string-append name ".drv") (let* ((file (add-data-to-store store (string-append name ".drv")
(derivation->bytevector drv) (derivation->bytevector drv)
(map derivation-input-path inputs))) (append (map derivation-input-path inputs)
sources)))
(drv* (set-field drv (derivation-file-name) file))) (drv* (set-field drv (derivation-file-name) file)))
;; Preserve pointer equality. This improves the performance of
;; 'eq?'-memoization on derivations.
(or (hash-ref %derivation-cache file)
(begin
(hash-set! %derivation-cache file drv*) (hash-set! %derivation-cache file drv*)
drv*))) drv*)))))
(define (invalidate-derivation-caches!) (define (invalidate-derivation-caches!)
"Invalidate internal derivation caches. This is mostly useful for "Invalidate internal derivation caches. This is mostly useful for
@ -920,7 +945,8 @@ recursively."
;; in the format used in 'derivation' calls. ;; in the format used in 'derivation' calls.
(mlambda (input loop) (mlambda (input loop)
(match input (match input
(($ <derivation-input> path (sub-drvs ...)) (($ <derivation-input> (= derivation-file-name path)
(sub-drvs ...))
(match (vhash-assoc path mapping) (match (vhash-assoc path mapping)
((_ . (? derivation? replacement)) ((_ . (? derivation? replacement))
(cons replacement sub-drvs)) (cons replacement sub-drvs))
@ -990,6 +1016,11 @@ derivation/output pairs, using the specified MODE."
(build-things store (map (match-lambda (build-things store (map (match-lambda
((? derivation? drv) ((? derivation? drv)
(derivation-file-name drv)) (derivation-file-name drv))
((? derivation-input? input)
(cons (derivation-input-path input)
(string-join
(derivation-input-sub-derivations input)
",")))
((? string? file) file) ((? string? file) file)
(((? derivation? drv) . output) (((? derivation? drv) . output)
(cons (derivation-file-name drv) (cons (derivation-file-name drv)

1
guix/download.scm
View File

@ -394,7 +394,6 @@
'(guix base16) '(bytevector->base16-string)) '(guix base16) '(bytevector->base16-string))
(list (guix-publish "ci.guix.gnu.org") (list (guix-publish "ci.guix.gnu.org")
(guix-publish "mirror.hydra.gnu.org")
(lambda (file algo hash) (lambda (file algo hash)
;; 'tarballs.nixos.org' supports several algorithms. ;; 'tarballs.nixos.org' supports several algorithms.
(string-append "https://tarballs.nixos.org/" (string-append "https://tarballs.nixos.org/"

4
guix/progress.scm
View File

@ -197,7 +197,9 @@ object) and TRANSFERRED (a total number of bytes) to determine the
throughput." throughput."
(define elapsed (define elapsed
(duration->seconds (duration->seconds
(time-difference (current-time time-monotonic) start-time))) (time-difference (current-time (time-type start-time))
start-time)))
(if (and (number? size) (not (zero? size))) (if (and (number? size) (not (zero? size)))
(let* ((% (* 100.0 (/ transferred size))) (let* ((% (* 100.0 (/ transferred size)))
(throughput (/ transferred elapsed)) (throughput (/ transferred elapsed))

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