gnu: ncbi-vdb: Use modify-phases syntax.

* gnu/packages/bioinformatics.scm (ncbi-vdb)[arguments]: Use modify-phases
syntax.

gnu/packages/bioinformatics.scm

@@ -4463,8 +4463,8 @@ simultaneously.")
      `(#:parallel-build? #f ; not supported
        #:tests? #f ; no "check" target
        #:phases
-       (alist-replace
-        'configure
+       (modify-phases %standard-phases
+         (replace 'configure
            (lambda* (#:key inputs outputs #:allow-other-keys)
              (let ((out (assoc-ref outputs "out")))
                ;; Override include path for libmagic
@@ -4497,9 +4497,8 @@ simultaneously.")
                        (string-append "--with-ngs-java-prefix="
                                       (assoc-ref inputs "java-ngs"))
                        (string-append "--with-hdf5-prefix="
-                                   (assoc-ref inputs "hdf5"))))))
-        (alist-cons-after
-         'install 'install-interfaces
+                                      (assoc-ref inputs "hdf5")))))))
+         (add-after 'install 'install-interfaces
            (lambda* (#:key outputs #:allow-other-keys)
              ;; Install interface libraries.  On i686 the interface libraries
              ;; are installed to "linux/gcc/i386", so we need to use the Linux
@@ -4516,8 +4515,8 @@ simultaneously.")
              ;; Install interface headers
              (copy-recursively "interfaces"
                                (string-append (assoc-ref outputs "out")
-                                            "/include")))
-         %standard-phases))))
+                                              "/include"))
+             #t)))))
     (inputs
      `(("libxml2" ,libxml2)
        ("ngs-sdk" ,ngs-sdk)